Literature DB >> 21578730

3-Hydr-oxy-N'-(2-methoxy-benzyl-idene)-2-naphthohydrazide.

Yu-Mei Hao1.   

Abstract

In the title Schiff base compound, C(19)H(16)N(2)O(3), the dihedral angle between the mean planes of the benzene ring and the naphthyl ring system is 0.8 (2)°. The mean plane of the hydrazide group forms dihedral angles of 2.0 (2) and 2.2 (2)°, respectively, with the mean planes of the benzene ring and the naphthyl ring system. A strong intra-molecular N-H⋯O hydrogen bond is present. In the crystal, inter-molecular O-H⋯O hydrogen bonds form chains along the c axis and help to provide stability in the crystal packing.

Entities:  

Year:  2009        PMID: 21578730      PMCID: PMC2971856          DOI: 10.1107/S1600536809043086

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmaceutical and medicinal activities of Schiff bases, see: Dao et al. (2000 ▶); Sriram et al. (2006 ▶); Karthikeyan et al. (2006 ▶). For the coordination chemistry of Schiff bases, see: Ali et al. (2008 ▶); Kargar et al. (2009 ▶); Yeap et al. (2009 ▶). For the crystal structures of Schiff base compounds, see: Fun et al. (2009 ▶); Nadeem et al. (2009 ▶); Eltayeb et al. (2008 ▶); Hao (2009a ▶,b ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C19H16N2O3 M = 320.34 Monoclinic, a = 7.4990 (6) Å b = 15.4256 (13) Å c = 13.3903 (12) Å β = 96.709 (4)° V = 1538.3 (2) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.18 × 0.17 × 0.17 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.983, T max = 0.984 9323 measured reflections 3349 independent reflections 2520 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.119 S = 1.04 3349 reflections 223 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.16 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809043086/jj2010sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809043086/jj2010Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H16N2O3F(000) = 672
Mr = 320.34Dx = 1.383 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3028 reflections
a = 7.4990 (6) Åθ = 2.6–30.0°
b = 15.4256 (13) ŵ = 0.10 mm1
c = 13.3903 (12) ÅT = 298 K
β = 96.709 (4)°Block, yellow
V = 1538.3 (2) Å30.18 × 0.17 × 0.17 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3349 independent reflections
Radiation source: fine-focus sealed tube2520 reflections with I > 2σ(I)
graphiteRint = 0.023
ω scansθmax = 27.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.983, Tmax = 0.984k = −19→19
9323 measured reflectionsl = −17→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.119w = 1/[σ2(Fo2) + (0.0572P)2 + 0.2454P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
3349 reflectionsΔρmax = 0.20 e Å3
223 parametersΔρmin = −0.16 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0080 (13)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.12815 (15)1.07729 (7)0.87156 (7)0.0541 (3)
O20.53258 (17)0.75013 (6)1.13388 (7)0.0558 (3)
O30.43652 (16)0.74188 (7)0.81939 (7)0.0526 (3)
H30.45250.73910.75990.079*
N10.36704 (15)0.89208 (7)1.04707 (8)0.0409 (3)
N20.41657 (16)0.82106 (7)0.99432 (8)0.0408 (3)
C10.23017 (18)1.03244 (9)1.03531 (10)0.0394 (3)
C20.14420 (18)1.09540 (9)0.97151 (10)0.0399 (3)
C30.0791 (2)1.17049 (10)1.01086 (12)0.0502 (4)
H3A0.02211.21220.96820.060*
C40.0989 (3)1.18316 (11)1.11277 (13)0.0663 (5)
H40.05421.23341.13910.080*
C50.1840 (3)1.12260 (12)1.17626 (12)0.0731 (6)
H50.19761.13211.24530.088*
C60.2491 (2)1.04788 (10)1.13819 (11)0.0553 (4)
H60.30671.00711.18180.066*
C70.0339 (3)1.13737 (12)0.80462 (11)0.0631 (5)
H7A−0.08671.14360.82100.095*
H7B0.03131.11660.73690.095*
H7C0.09341.19250.81070.095*
C80.29350 (19)0.95271 (9)0.99292 (10)0.0422 (3)
H80.27950.94600.92340.051*
C90.49987 (18)0.75329 (8)1.04213 (9)0.0371 (3)
C100.55517 (17)0.68060 (8)0.97827 (9)0.0348 (3)
C110.52607 (18)0.67543 (9)0.87108 (9)0.0381 (3)
C120.5848 (2)0.60516 (9)0.82249 (10)0.0439 (3)
H120.56550.60300.75260.053*
C130.67397 (19)0.53573 (9)0.87531 (10)0.0410 (3)
C140.7369 (2)0.46152 (10)0.82747 (12)0.0561 (4)
H140.72060.45770.75770.067*
C150.8204 (2)0.39614 (10)0.88198 (14)0.0615 (5)
H150.85990.34800.84900.074*
C160.8481 (2)0.39985 (10)0.98705 (13)0.0558 (4)
H160.90600.35461.02350.067*
C170.79016 (19)0.46984 (9)1.03570 (11)0.0459 (3)
H170.80840.47201.10560.055*
C180.70267 (17)0.53921 (8)0.98165 (10)0.0370 (3)
C190.64040 (17)0.61253 (9)1.02959 (9)0.0376 (3)
H190.65790.61501.09940.045*
H20.398 (2)0.8200 (12)0.9273 (7)0.080*
U11U22U33U12U13U23
O10.0763 (8)0.0503 (6)0.0362 (5)0.0137 (5)0.0089 (5)0.0025 (4)
O20.0943 (9)0.0461 (6)0.0267 (5)0.0082 (5)0.0067 (5)−0.0025 (4)
O30.0792 (8)0.0541 (6)0.0249 (5)0.0150 (5)0.0074 (5)0.0044 (4)
N10.0482 (7)0.0378 (6)0.0375 (6)−0.0002 (5)0.0085 (5)−0.0037 (5)
N20.0546 (7)0.0381 (6)0.0302 (6)0.0043 (5)0.0072 (5)−0.0025 (5)
C10.0418 (7)0.0381 (7)0.0388 (7)−0.0053 (6)0.0063 (6)−0.0028 (6)
C20.0435 (8)0.0392 (7)0.0375 (7)−0.0052 (6)0.0059 (6)−0.0016 (6)
C30.0600 (9)0.0390 (8)0.0502 (8)0.0048 (7)0.0007 (7)−0.0027 (6)
C40.0891 (13)0.0515 (10)0.0554 (10)0.0164 (9)−0.0042 (9)−0.0200 (8)
C50.1083 (15)0.0666 (12)0.0402 (9)0.0207 (11)−0.0087 (9)−0.0189 (8)
C60.0726 (11)0.0507 (9)0.0398 (8)0.0091 (8)−0.0047 (7)−0.0034 (7)
C70.0817 (12)0.0653 (11)0.0412 (8)0.0150 (9)0.0030 (8)0.0094 (8)
C80.0514 (8)0.0423 (8)0.0338 (7)0.0004 (6)0.0087 (6)0.0007 (6)
C90.0471 (8)0.0370 (7)0.0279 (6)−0.0065 (6)0.0071 (5)−0.0007 (5)
C100.0398 (7)0.0376 (7)0.0274 (6)−0.0055 (5)0.0060 (5)−0.0005 (5)
C110.0457 (8)0.0412 (7)0.0279 (6)−0.0021 (6)0.0063 (5)0.0036 (5)
C120.0595 (9)0.0474 (8)0.0261 (6)−0.0037 (7)0.0102 (6)−0.0022 (6)
C130.0468 (8)0.0398 (7)0.0385 (7)−0.0054 (6)0.0137 (6)−0.0024 (6)
C140.0767 (11)0.0485 (9)0.0469 (9)−0.0011 (8)0.0237 (8)−0.0075 (7)
C150.0700 (11)0.0409 (9)0.0788 (12)0.0036 (8)0.0303 (9)−0.0059 (8)
C160.0529 (9)0.0421 (9)0.0737 (11)0.0035 (7)0.0128 (8)0.0066 (8)
C170.0446 (8)0.0430 (8)0.0498 (8)−0.0024 (6)0.0039 (6)0.0051 (6)
C180.0362 (7)0.0372 (7)0.0381 (7)−0.0056 (5)0.0068 (5)0.0009 (5)
C190.0427 (7)0.0415 (7)0.0280 (6)−0.0058 (6)0.0023 (5)0.0003 (5)
O1—C21.3587 (16)C7—H7B0.9600
O1—C71.4190 (18)C7—H7C0.9600
O2—C91.2253 (15)C8—H80.9300
O3—C111.3683 (16)C9—C101.4978 (18)
O3—H30.8200C10—C191.3713 (18)
N1—C81.2693 (17)C10—C111.4287 (17)
N1—N21.3778 (15)C11—C121.3635 (19)
N2—C91.3415 (17)C12—C131.409 (2)
N2—H20.892 (9)C12—H120.9300
C1—C61.3889 (19)C13—C181.4160 (18)
C1—C21.4000 (19)C13—C141.419 (2)
C1—C81.4571 (19)C14—C151.355 (2)
C2—C31.385 (2)C14—H140.9300
C3—C41.369 (2)C15—C161.399 (2)
C3—H3A0.9300C15—H150.9300
C4—C51.369 (2)C16—C171.358 (2)
C4—H40.9300C16—H160.9300
C5—C61.373 (2)C17—C181.4101 (19)
C5—H50.9300C17—H170.9300
C6—H60.9300C18—C191.4069 (19)
C7—H7A0.9600C19—H190.9300
C2—O1—C7117.92 (11)O2—C9—N2122.48 (12)
C11—O3—H3109.5O2—C9—C10120.42 (12)
C8—N1—N2114.72 (11)N2—C9—C10117.10 (11)
C9—N2—N1120.89 (11)C19—C10—C11117.92 (12)
C9—N2—H2118.3 (12)C19—C10—C9115.53 (11)
N1—N2—H2120.7 (12)C11—C10—C9126.54 (12)
C6—C1—C2118.21 (13)C12—C11—O3121.40 (11)
C6—C1—C8122.06 (13)C12—C11—C10120.25 (12)
C2—C1—C8119.71 (12)O3—C11—C10118.34 (11)
O1—C2—C3123.52 (13)C11—C12—C13121.71 (12)
O1—C2—C1116.10 (12)C11—C12—H12119.1
C3—C2—C1120.38 (13)C13—C12—H12119.1
C4—C3—C2119.77 (14)C12—C13—C18118.92 (12)
C4—C3—H3A120.1C12—C13—C14123.37 (13)
C2—C3—H3A120.1C18—C13—C14117.71 (13)
C3—C4—C5120.65 (15)C15—C14—C13120.96 (15)
C3—C4—H4119.7C15—C14—H14119.5
C5—C4—H4119.7C13—C14—H14119.5
C4—C5—C6120.15 (15)C14—C15—C16121.09 (15)
C4—C5—H5119.9C14—C15—H15119.5
C6—C5—H5119.9C16—C15—H15119.5
C5—C6—C1120.84 (15)C17—C16—C15119.77 (15)
C5—C6—H6119.6C17—C16—H16120.1
C1—C6—H6119.6C15—C16—H16120.1
O1—C7—H7A109.5C16—C17—C18120.85 (14)
O1—C7—H7B109.5C16—C17—H17119.6
H7A—C7—H7B109.5C18—C17—H17119.6
O1—C7—H7C109.5C19—C18—C17122.36 (12)
H7A—C7—H7C109.5C19—C18—C13118.02 (12)
H7B—C7—H7C109.5C17—C18—C13119.62 (12)
N1—C8—C1122.61 (12)C10—C19—C18123.16 (12)
N1—C8—H8118.7C10—C19—H19118.4
C1—C8—H8118.7C18—C19—H19118.4
D—H···AD—HH···AD···AD—H···A
N2—H2···O30.89 (1)1.93 (1)2.6613 (14)138 (2)
O3—H3···O2i0.821.862.6689 (13)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯O30.892 (9)1.929 (14)2.6613 (14)138.3 (16)
O3—H3⋯O2i 0.821.862.6689 (13)167

Symmetry code: (i) .

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