| Literature DB >> 21578668 |
Jun-Dan Fu1, Zhi-Wei Tang, Ming-Yue Yuan, Yi-Hang Wen.
Abstract
The title complex, {[Co(2)(C(9)H(4)N(2)O(4))(2)(H(2)O)(4)]·3H(2)O}(n), was synthesized hydro-thermally. The unique Co(II) ion is coordin-ated in a distorted octa-hedral coordination environment by two water mol-ecules and three symmetry-related 1H-benzimid-azole-5,6-dicarboxyl-ate (Hbidc) ligands. The Hbidc ligands coordinate via a bis-chelating and mono-chelating carboxyl-ate group and by an imidazole group N atom, bridging the Co(II) ions and forming an extended two-dimensional structure in the ab plane. In the crystal structure, inter-molecular N-H⋯O and O-H⋯O hydrogen bonds connect complex and solvent water mol-ecules, forming a three-dimensional supermolecular network. One of the solvent water mol-ecules lies on a twofold rotation axis.Entities:
Year: 2009 PMID: 21578668 PMCID: PMC2971884 DOI: 10.1107/S1600536809049083
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co2(C9H4N2O4)2(H2O)4]·3H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 5695 reflections |
| θ = 2.1–27.6° | |
| µ = 1.53 mm−1 | |
| β = 121.006 (4)° | Block, red |
| 0.43 × 0.25 × 0.07 mm | |
| Bruker APEXII diffractometer | 2656 independent reflections |
| Radiation source: fine-focus sealed tube | 2402 reflections with |
| graphite | |
| ω scans | θmax = 27.6°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 9315 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2656 reflections | (Δ/σ)max = 0.001 |
| 174 parameters | Δρmax = 0.81 e Å−3 |
| 6 restraints | Δρmin = −0.63 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.199951 (12) | 0.14498 (3) | 0.12124 (2) | 0.01825 (10) | |
| O1 | −0.19686 (7) | 0.44398 (15) | −0.25564 (13) | 0.0239 (3) | |
| O2 | −0.20916 (7) | 0.22564 (15) | −0.33254 (12) | 0.0216 (3) | |
| O3 | −0.10064 (8) | −0.07292 (17) | −0.23544 (16) | 0.0335 (4) | |
| O3W | 0.20211 (8) | 0.25089 (16) | 0.26967 (13) | 0.0277 (3) | |
| H3WA | 0.1974 | 0.3419 | 0.2690 | 0.042* | |
| H3WB | 0.1706 | 0.2071 | 0.2742 | 0.042* | |
| O4 | −0.14121 (7) | 0.02445 (15) | −0.12688 (12) | 0.0224 (3) | |
| O4W | 0.20838 (8) | 0.03724 (17) | −0.01154 (13) | 0.0302 (3) | |
| H4WA | 0.2019 | 0.0885 | −0.0696 | 0.045* | |
| H4WB | 0.1863 | −0.0415 | −0.0365 | 0.045* | |
| N1 | 0.07455 (8) | 0.50513 (18) | −0.06630 (15) | 0.0222 (3) | |
| H1A | 0.0716 | 0.5976 | −0.0794 | 0.027* | |
| N2 | 0.12237 (8) | 0.28672 (18) | 0.00087 (15) | 0.0225 (3) | |
| C1 | −0.09320 (9) | 0.3057 (2) | −0.19386 (16) | 0.0181 (4) | |
| C2 | −0.06298 (9) | 0.1649 (2) | −0.15733 (16) | 0.0175 (4) | |
| C3 | 0.00868 (10) | 0.1468 (2) | −0.09321 (18) | 0.0207 (4) | |
| H3A | 0.0285 | 0.0544 | −0.0700 | 0.025* | |
| C4 | 0.05016 (9) | 0.2710 (2) | −0.06466 (17) | 0.0195 (4) | |
| C5 | 0.01982 (10) | 0.4091 (2) | −0.10514 (17) | 0.0189 (4) | |
| C6 | −0.05185 (9) | 0.4293 (2) | −0.16866 (17) | 0.0195 (4) | |
| H6A | −0.0714 | 0.5216 | −0.1933 | 0.023* | |
| C7 | −0.17032 (9) | 0.3262 (2) | −0.26428 (16) | 0.0177 (3) | |
| C8 | −0.10569 (9) | 0.0287 (2) | −0.17727 (16) | 0.0194 (4) | |
| C9 | 0.13324 (10) | 0.4278 (2) | −0.00439 (18) | 0.0240 (4) | |
| H9A | 0.1774 | 0.4691 | 0.0315 | 0.029* | |
| O1W | 0.0000 | 0.24202 (17) | 0.2500 | 0.1066 (18) | |
| H1W | −0.0300 | 0.1917 | 0.2543 | 0.160* | |
| O2W | 0.1643 | 0.75912 (17) | 0.0016 | 0.0530 (5) | |
| H2WA | 0.1492 | 0.8072 | 0.0382 | 0.080* | |
| H2WB | 0.2053 | 0.7403 | 0.0558 | 0.080* |
| Co1 | 0.01193 (15) | 0.01637 (16) | 0.02247 (16) | −0.00183 (8) | 0.00601 (11) | 0.00077 (9) |
| O1 | 0.0152 (6) | 0.0189 (7) | 0.0326 (7) | 0.0021 (5) | 0.0086 (6) | −0.0031 (6) |
| O2 | 0.0145 (6) | 0.0201 (7) | 0.0250 (7) | −0.0001 (5) | 0.0064 (5) | −0.0035 (5) |
| O3 | 0.0321 (8) | 0.0251 (8) | 0.0530 (10) | −0.0099 (6) | 0.0289 (8) | −0.0140 (7) |
| O3W | 0.0269 (8) | 0.0208 (7) | 0.0381 (8) | −0.0053 (6) | 0.0186 (7) | −0.0047 (6) |
| O4 | 0.0197 (6) | 0.0207 (7) | 0.0290 (7) | −0.0043 (5) | 0.0139 (6) | −0.0005 (5) |
| O4W | 0.0398 (9) | 0.0241 (7) | 0.0287 (7) | −0.0068 (6) | 0.0191 (7) | −0.0012 (6) |
| N1 | 0.0166 (8) | 0.0159 (8) | 0.0313 (9) | −0.0036 (6) | 0.0104 (7) | −0.0003 (6) |
| N2 | 0.0118 (7) | 0.0221 (8) | 0.0271 (8) | −0.0023 (6) | 0.0054 (6) | 0.0023 (7) |
| C1 | 0.0134 (8) | 0.0187 (9) | 0.0201 (8) | 0.0002 (7) | 0.0072 (7) | 0.0008 (7) |
| C2 | 0.0138 (8) | 0.0164 (9) | 0.0202 (8) | −0.0008 (6) | 0.0072 (7) | 0.0011 (7) |
| C3 | 0.0148 (9) | 0.0162 (9) | 0.0263 (9) | 0.0010 (6) | 0.0072 (7) | 0.0029 (7) |
| C4 | 0.0123 (8) | 0.0212 (9) | 0.0219 (9) | −0.0009 (7) | 0.0067 (7) | 0.0021 (7) |
| C5 | 0.0171 (9) | 0.0161 (9) | 0.0225 (9) | −0.0024 (7) | 0.0095 (7) | 0.0000 (7) |
| C6 | 0.0163 (8) | 0.0159 (9) | 0.0244 (9) | 0.0015 (7) | 0.0091 (7) | 0.0023 (7) |
| C7 | 0.0135 (8) | 0.0176 (8) | 0.0208 (9) | 0.0006 (7) | 0.0079 (7) | 0.0026 (7) |
| C8 | 0.0119 (8) | 0.0173 (9) | 0.0237 (9) | −0.0013 (7) | 0.0054 (7) | 0.0017 (7) |
| C9 | 0.0150 (9) | 0.0241 (10) | 0.0289 (10) | −0.0037 (7) | 0.0084 (8) | −0.0001 (8) |
| O1W | 0.103 (3) | 0.0399 (18) | 0.247 (6) | 0.000 | 0.140 (4) | 0.000 |
| O2W | 0.0709 (14) | 0.0310 (10) | 0.0514 (11) | −0.0099 (9) | 0.0275 (10) | −0.0037 (8) |
| Co1—O4i | 2.0603 (14) | N1—C5 | 1.376 (2) |
| Co1—N2 | 2.0898 (16) | N1—H1A | 0.8598 |
| Co1—O4W | 2.0901 (15) | N2—C9 | 1.322 (3) |
| Co1—O3W | 2.1497 (15) | N2—C4 | 1.395 (2) |
| Co1—O2ii | 2.1560 (13) | C1—C6 | 1.390 (3) |
| Co1—O1ii | 2.1837 (14) | C1—C2 | 1.420 (3) |
| Co1—C7ii | 2.5057 (18) | C1—C7 | 1.493 (2) |
| O1—C7 | 1.265 (2) | C2—C3 | 1.386 (3) |
| O1—Co1iii | 2.1837 (14) | C2—C8 | 1.511 (2) |
| O2—C7 | 1.266 (2) | C3—C4 | 1.393 (3) |
| O2—Co1iii | 2.1560 (13) | C3—H3A | 0.9300 |
| O3—C8 | 1.244 (2) | C4—C5 | 1.404 (3) |
| O3W—H3WA | 0.8399 | C5—C6 | 1.389 (3) |
| O3W—H3WB | 0.8399 | C6—H6A | 0.9300 |
| O4—C8 | 1.269 (2) | C7—Co1iii | 2.5057 (18) |
| O4—Co1i | 2.0603 (14) | C9—H9A | 0.9300 |
| O4W—H4WA | 0.8401 | O1W—H1W | 0.8401 |
| O4W—H4WB | 0.8393 | O2W—H2WA | 0.8400 |
| N1—C9 | 1.338 (3) | O2W—H2WB | 0.8401 |
| O4i—Co1—N2 | 101.30 (6) | C9—N2—Co1 | 122.80 (13) |
| O4i—Co1—O4W | 90.43 (6) | C4—N2—Co1 | 130.58 (13) |
| N2—Co1—O4W | 93.58 (7) | C6—C1—C2 | 121.02 (16) |
| O4i—Co1—O3W | 91.41 (6) | C6—C1—C7 | 117.55 (16) |
| N2—Co1—O3W | 91.38 (6) | C2—C1—C7 | 121.40 (16) |
| O4W—Co1—O3W | 174.27 (6) | C3—C2—C1 | 121.02 (16) |
| O4i—Co1—O2ii | 158.80 (5) | C3—C2—C8 | 116.03 (16) |
| N2—Co1—O2ii | 99.73 (6) | C1—C2—C8 | 122.80 (16) |
| O4W—Co1—O2ii | 90.90 (6) | C2—C3—C4 | 118.00 (17) |
| O3W—Co1—O2ii | 85.43 (5) | C2—C3—H3A | 121.0 |
| O4i—Co1—O1ii | 98.39 (5) | C4—C3—H3A | 121.0 |
| N2—Co1—O1ii | 160.30 (6) | C3—C4—N2 | 130.70 (18) |
| O4W—Co1—O1ii | 85.57 (6) | C3—C4—C5 | 120.52 (17) |
| O3W—Co1—O1ii | 88.79 (6) | N2—C4—C5 | 108.77 (16) |
| O2ii—Co1—O1ii | 60.64 (5) | N1—C5—C6 | 132.21 (18) |
| O4i—Co1—C7ii | 128.59 (6) | N1—C5—C4 | 105.67 (16) |
| N2—Co1—C7ii | 130.06 (6) | C6—C5—C4 | 122.11 (17) |
| O4W—Co1—C7ii | 88.46 (6) | C5—C6—C1 | 117.23 (17) |
| O3W—Co1—C7ii | 86.15 (6) | C5—C6—H6A | 121.4 |
| O2ii—Co1—C7ii | 30.33 (6) | C1—C6—H6A | 121.4 |
| O1ii—Co1—C7ii | 30.31 (6) | O1—C7—O2 | 119.96 (16) |
| C7—O1—Co1iii | 89.07 (11) | O1—C7—C1 | 119.97 (16) |
| C7—O2—Co1iii | 90.30 (11) | O2—C7—C1 | 120.07 (16) |
| Co1—O3W—H3WA | 119.7 | O1—C7—Co1iii | 60.62 (9) |
| Co1—O3W—H3WB | 102.7 | O2—C7—Co1iii | 59.36 (9) |
| H3WA—O3W—H3WB | 111.6 | C1—C7—Co1iii | 178.35 (14) |
| C8—O4—Co1i | 128.68 (13) | O3—C8—O4 | 125.06 (18) |
| Co1—O4W—H4WA | 116.2 | O3—C8—C2 | 118.29 (17) |
| Co1—O4W—H4WB | 116.2 | O4—C8—C2 | 116.53 (17) |
| H4WA—O4W—H4WB | 109.6 | N2—C9—N1 | 113.50 (17) |
| C9—N1—C5 | 107.24 (16) | N2—C9—H9A | 123.3 |
| C9—N1—H1A | 126.4 | N1—C9—H9A | 123.3 |
| C5—N1—H1A | 126.4 | H2WA—O2W—H2WB | 102.3 |
| C9—N2—C4 | 104.80 (16) | ||
| O4i—Co1—N2—C9 | 158.93 (16) | C3—C4—C5—N1 | −177.40 (18) |
| O4W—Co1—N2—C9 | −109.92 (17) | N2—C4—C5—N1 | 1.9 (2) |
| O3W—Co1—N2—C9 | 67.21 (17) | C3—C4—C5—C6 | 3.7 (3) |
| O2ii—Co1—N2—C9 | −18.39 (18) | N2—C4—C5—C6 | −177.00 (18) |
| O1ii—Co1—N2—C9 | −23.1 (3) | N1—C5—C6—C1 | 179.8 (2) |
| C7ii—Co1—N2—C9 | −18.9 (2) | C4—C5—C6—C1 | −1.6 (3) |
| O4i—Co1—N2—C4 | −3.25 (19) | C2—C1—C6—C5 | −0.9 (3) |
| O4W—Co1—N2—C4 | 87.90 (18) | C7—C1—C6—C5 | −178.77 (17) |
| O3W—Co1—N2—C4 | −94.97 (18) | Co1iii—O1—C7—O2 | 1.72 (18) |
| O2ii—Co1—N2—C4 | 179.43 (17) | Co1iii—O1—C7—C1 | −178.23 (15) |
| O1ii—Co1—N2—C4 | 174.76 (16) | Co1iii—O2—C7—O1 | −1.74 (18) |
| C7ii—Co1—N2—C4 | 178.90 (16) | Co1iii—O2—C7—C1 | 178.21 (15) |
| C6—C1—C2—C3 | 1.4 (3) | C6—C1—C7—O1 | −30.8 (3) |
| C7—C1—C2—C3 | 179.21 (18) | C2—C1—C7—O1 | 151.34 (18) |
| C6—C1—C2—C8 | 176.81 (17) | C6—C1—C7—O2 | 149.27 (18) |
| C7—C1—C2—C8 | −5.4 (3) | C2—C1—C7—O2 | −28.6 (3) |
| C1—C2—C3—C4 | 0.6 (3) | Co1i—O4—C8—O3 | 0.8 (3) |
| C8—C2—C3—C4 | −175.08 (17) | Co1i—O4—C8—C2 | −175.08 (12) |
| C2—C3—C4—N2 | 177.8 (2) | C3—C2—C8—O3 | −62.2 (2) |
| C2—C3—C4—C5 | −3.1 (3) | C1—C2—C8—O3 | 122.2 (2) |
| C9—N2—C4—C3 | 177.6 (2) | C3—C2—C8—O4 | 114.0 (2) |
| Co1—N2—C4—C3 | −17.9 (3) | C1—C2—C8—O4 | −61.7 (2) |
| C9—N2—C4—C5 | −1.6 (2) | C4—N2—C9—N1 | 0.7 (2) |
| Co1—N2—C4—C5 | 162.99 (14) | Co1—N2—C9—N1 | −165.38 (14) |
| C9—N1—C5—C6 | 177.3 (2) | C5—N1—C9—N2 | 0.4 (2) |
| C9—N1—C5—C4 | −1.4 (2) |
| H··· | ||||
| O3W—H3WA···O1iv | 0.84 | 1.97 | 2.798 (2) | 170 |
| N1—H1A···O1Wiv | 0.86 | 2.45 | 3.130 (2) | 136 |
| O2W—H2WA···O4iv | 0.84 | 1.99 | 2.78546 | 157 |
| O3W—H3WB···O3i | 0.84 | 1.85 | 2.641 (2) | 158 |
| O4W—H4WB···O3v | 0.84 | 2.60 | 3.095 (2) | 119 |
| O4W—H4WA···O2v | 0.84 | 1.86 | 2.679 (2) | 165 |
| O4W—H4WB···O2Wvi | 0.84 | 2.02 | 2.76864 | 148 |
| N1—H1A···O2W | 0.86 | 2.31 | 2.89857 | 125 |
| O1W—H1W···O3vii | 0.84 | 1.98 | 2.8218 (18) | 180 |
| O2W—H2WB···O3Wviii | 0.84 | 2.16 | 2.94922 | 157 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3 | 0.84 | 1.97 | 2.798 (2) | 170 |
| N1—H1 | 0.86 | 2.45 | 3.130 (2) | 136 |
| O2 | 0.84 | 1.99 | 2.786 | 157 |
| O3 | 0.84 | 1.85 | 2.641 (2) | 158 |
| O4 | 0.84 | 2.60 | 3.095 (2) | 119 |
| O4 | 0.84 | 1.86 | 2.679 (2) | 165 |
| O4 | 0.84 | 2.02 | 2.769 | 148 |
| N1—H1 | 0.86 | 2.31 | 2.899 | 125 |
| O1 | 0.84 | 1.98 | 2.8218 (18) | 180 |
| O2 | 0.84 | 2.16 | 2.949 | 157 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .