| Literature DB >> 21578441 |
Jin Chen1, Xukang Ren, Zhaobo Li, Xiaohua Du.
Abstract
In the title compound, C(10)H(11)NO(5), the six-membered 1,3-dioxane ring displays a chair conformation, with the hydr-oxy and 2-nitro-phenyl groups in equatorial positions, which minimizes steric hindrance. In the crystal, mol-ecules are linked into chains along the b axis by inter-molecular O-H⋯O hydrogen bonds.Entities:
Year: 2009 PMID: 21578441 PMCID: PMC2971292 DOI: 10.1107/S1600536809043402
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H11NO5 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6214 reflections |
| θ = 3.2–27.4° | |
| µ = 0.12 mm−1 | |
| β = 101.221 (1)° | Chunk, colorless |
| 0.35 × 0.19 × 0.12 mm | |
| Rigaku R-AXIS RAPID diffractometer | 2346 independent reflections |
| Radiation source: rolling anode | 1466 reflections with |
| graphite | |
| Detector resolution: 10.00 pixels mm-1 | θmax = 27.4°, θmin = 3.2° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 9906 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2346 reflections | Δρmax = 0.18 e Å−3 |
| 147 parameters | Δρmin = −0.17 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0152 (19) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O3 | 0.65238 (15) | 0.68340 (10) | 0.28615 (9) | 0.0558 (3) | |
| C5 | 0.78112 (19) | 0.53115 (14) | 0.41276 (12) | 0.0456 (4) | |
| O2 | 0.70918 (18) | 0.73226 (11) | 0.47090 (10) | 0.0693 (4) | |
| N1 | 0.89732 (19) | 0.48237 (15) | 0.24515 (13) | 0.0616 (4) | |
| C9 | 0.8397 (2) | 0.31608 (16) | 0.36545 (16) | 0.0632 (5) | |
| H9 | 0.8762 | 0.2600 | 0.3174 | 0.076* | |
| C3 | 0.7680 (2) | 0.66933 (14) | 0.38712 (13) | 0.0485 (4) | |
| H3 | 0.8797 | 0.7022 | 0.3804 | 0.058* | |
| C10 | 0.83678 (19) | 0.44328 (15) | 0.34425 (13) | 0.0488 (4) | |
| C6 | 0.7294 (2) | 0.48360 (17) | 0.50467 (14) | 0.0588 (5) | |
| H6 | 0.6903 | 0.5386 | 0.5524 | 0.071* | |
| C8 | 0.7884 (3) | 0.27296 (19) | 0.45772 (18) | 0.0716 (6) | |
| H8 | 0.7905 | 0.1874 | 0.4730 | 0.086* | |
| O4 | 0.9752 (2) | 0.57938 (16) | 0.24619 (14) | 0.0940 (5) | |
| O1 | 0.6154 (2) | 1.02233 (13) | 0.3183 (2) | 0.1241 (8) | |
| H101 | 0.5292 | 1.0497 | 0.2787 | 0.149* | |
| C2 | 0.7052 (3) | 0.86500 (18) | 0.45027 (19) | 0.0837 (7) | |
| H2A | 0.8195 | 0.8949 | 0.4502 | 0.100* | |
| H2B | 0.6628 | 0.9084 | 0.5082 | 0.100* | |
| C1 | 0.5922 (3) | 0.89338 (17) | 0.3408 (2) | 0.0783 (7) | |
| H1 | 0.4730 | 0.8775 | 0.3446 | 0.094* | |
| C4 | 0.6432 (3) | 0.81319 (17) | 0.25365 (17) | 0.0706 (6) | |
| H4A | 0.5610 | 0.8228 | 0.1856 | 0.085* | |
| H4B | 0.7531 | 0.8403 | 0.2408 | 0.085* | |
| C7 | 0.7342 (3) | 0.3565 (2) | 0.52745 (16) | 0.0700 (5) | |
| H7 | 0.7004 | 0.3274 | 0.5905 | 0.084* | |
| O5 | 0.8708 (2) | 0.41251 (17) | 0.16609 (13) | 0.1034 (6) |
| O3 | 0.0629 (7) | 0.0404 (6) | 0.0568 (7) | −0.0064 (5) | −0.0067 (5) | 0.0055 (5) |
| C5 | 0.0449 (8) | 0.0405 (9) | 0.0484 (8) | 0.0015 (6) | 0.0018 (7) | −0.0013 (7) |
| O2 | 0.0931 (9) | 0.0483 (7) | 0.0641 (8) | 0.0167 (6) | 0.0093 (7) | −0.0112 (6) |
| N1 | 0.0601 (9) | 0.0607 (10) | 0.0658 (10) | 0.0037 (7) | 0.0165 (7) | −0.0066 (8) |
| C9 | 0.0663 (11) | 0.0415 (10) | 0.0760 (12) | 0.0095 (8) | −0.0007 (9) | −0.0071 (9) |
| C3 | 0.0503 (9) | 0.0401 (9) | 0.0515 (9) | 0.0013 (7) | 0.0008 (7) | −0.0043 (7) |
| C10 | 0.0465 (8) | 0.0448 (9) | 0.0529 (9) | 0.0027 (7) | 0.0044 (7) | −0.0020 (7) |
| C6 | 0.0661 (11) | 0.0551 (11) | 0.0547 (10) | 0.0040 (8) | 0.0102 (8) | 0.0037 (8) |
| C8 | 0.0802 (13) | 0.0446 (11) | 0.0809 (13) | −0.0019 (9) | −0.0068 (11) | 0.0126 (10) |
| O4 | 0.1066 (12) | 0.0895 (12) | 0.0969 (11) | −0.0285 (10) | 0.0472 (9) | −0.0076 (9) |
| O1 | 0.0894 (11) | 0.0398 (9) | 0.214 (2) | 0.0013 (7) | −0.0431 (13) | 0.0144 (10) |
| C2 | 0.0989 (16) | 0.0438 (11) | 0.0996 (16) | 0.0156 (10) | −0.0026 (13) | −0.0185 (10) |
| C1 | 0.0624 (11) | 0.0373 (10) | 0.1237 (18) | 0.0046 (8) | −0.0106 (12) | 0.0036 (11) |
| C4 | 0.0676 (12) | 0.0457 (10) | 0.0879 (14) | −0.0100 (8) | −0.0114 (10) | 0.0209 (10) |
| C7 | 0.0750 (13) | 0.0679 (13) | 0.0638 (11) | −0.0063 (10) | 0.0057 (10) | 0.0205 (10) |
| O5 | 0.1424 (15) | 0.1019 (13) | 0.0717 (9) | −0.0136 (11) | 0.0352 (10) | −0.0322 (9) |
| O3—C3 | 1.4142 (18) | C6—C7 | 1.382 (3) |
| O3—C4 | 1.438 (2) | C6—H6 | 0.9300 |
| C5—C6 | 1.383 (2) | C8—C7 | 1.369 (3) |
| C5—C10 | 1.395 (2) | C8—H8 | 0.9300 |
| C5—C3 | 1.505 (2) | O1—C1 | 1.421 (2) |
| O2—C3 | 1.394 (2) | O1—H101 | 0.8200 |
| O2—C2 | 1.436 (2) | C2—C1 | 1.510 (3) |
| N1—O4 | 1.206 (2) | C2—H2A | 0.9700 |
| N1—O5 | 1.2167 (19) | C2—H2B | 0.9700 |
| N1—C10 | 1.468 (2) | C1—C4 | 1.496 (3) |
| C9—C8 | 1.369 (3) | C1—H1 | 0.9800 |
| C9—C10 | 1.379 (2) | C4—H4A | 0.9700 |
| C9—H9 | 0.9300 | C4—H4B | 0.9700 |
| C3—H3 | 0.9800 | C7—H7 | 0.9300 |
| C3—O3—C4 | 109.84 (12) | C9—C8—H8 | 120.2 |
| C6—C5—C10 | 116.10 (15) | C7—C8—H8 | 120.2 |
| C6—C5—C3 | 120.83 (15) | C1—O1—H101 | 109.5 |
| C10—C5—C3 | 123.00 (15) | O2—C2—C1 | 110.25 (16) |
| C3—O2—C2 | 109.83 (15) | O2—C2—H2A | 109.6 |
| O4—N1—O5 | 122.79 (18) | C1—C2—H2A | 109.6 |
| O4—N1—C10 | 119.27 (15) | O2—C2—H2B | 109.6 |
| O5—N1—C10 | 117.90 (16) | C1—C2—H2B | 109.6 |
| C8—C9—C10 | 119.50 (18) | H2A—C2—H2B | 108.1 |
| C8—C9—H9 | 120.3 | O1—C1—C4 | 110.2 (2) |
| C10—C9—H9 | 120.3 | O1—C1—C2 | 106.94 (17) |
| O2—C3—O3 | 110.58 (13) | C4—C1—C2 | 109.60 (16) |
| O2—C3—C5 | 109.41 (14) | O1—C1—H1 | 110.0 |
| O3—C3—C5 | 107.32 (12) | C4—C1—H1 | 110.0 |
| O2—C3—H3 | 109.8 | C2—C1—H1 | 110.0 |
| O3—C3—H3 | 109.8 | O3—C4—C1 | 110.63 (17) |
| C5—C3—H3 | 109.8 | O3—C4—H4A | 109.5 |
| C9—C10—C5 | 122.56 (16) | C1—C4—H4A | 109.5 |
| C9—C10—N1 | 116.26 (16) | O3—C4—H4B | 109.5 |
| C5—C10—N1 | 121.19 (15) | C1—C4—H4B | 109.5 |
| C7—C6—C5 | 121.76 (18) | H4A—C4—H4B | 108.1 |
| C7—C6—H6 | 119.1 | C8—C7—C6 | 120.43 (19) |
| C5—C6—H6 | 119.1 | C8—C7—H7 | 119.8 |
| C9—C8—C7 | 119.65 (18) | C6—C7—H7 | 119.8 |
| C2—O2—C3—O3 | −65.20 (18) | O5—N1—C10—C9 | 33.6 (2) |
| C2—O2—C3—C5 | 176.81 (14) | O4—N1—C10—C5 | 35.4 (2) |
| C4—O3—C3—O2 | 64.54 (18) | O5—N1—C10—C5 | −146.86 (17) |
| C4—O3—C3—C5 | −176.20 (14) | C10—C5—C6—C7 | 0.5 (2) |
| C6—C5—C3—O2 | 3.4 (2) | C3—C5—C6—C7 | 177.47 (16) |
| C10—C5—C3—O2 | −179.88 (14) | C10—C9—C8—C7 | 0.3 (3) |
| C6—C5—C3—O3 | −116.59 (16) | C3—O2—C2—C1 | 58.5 (2) |
| C10—C5—C3—O3 | 60.11 (19) | O2—C2—C1—O1 | −171.0 (2) |
| C8—C9—C10—C5 | −0.9 (3) | O2—C2—C1—C4 | −51.6 (2) |
| C8—C9—C10—N1 | 178.63 (16) | C3—O3—C4—C1 | −57.32 (19) |
| C6—C5—C10—C9 | 0.4 (2) | O1—C1—C4—O3 | 168.64 (14) |
| C3—C5—C10—C9 | −176.42 (15) | C2—C1—C4—O3 | 51.2 (2) |
| C6—C5—C10—N1 | −179.05 (14) | C9—C8—C7—C6 | 0.6 (3) |
| C3—C5—C10—N1 | 4.1 (2) | C5—C6—C7—C8 | −1.1 (3) |
| O4—N1—C10—C9 | −144.09 (18) |
| H··· | ||||
| O1—H101···O3i | 0.82 | 2.08 | 2.8548 (18) | 157 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H101⋯O3i | 0.82 | 2.08 | 2.8548 (18) | 157 |
Symmetry code: (i) .