Literature DB >> 21578286

N'-(2-Chloro-benzyl-idene)benzo-hydrazide.

Chuan-Gang Fan1, Ming-Zhi Song.   

Abstract

The asymmetric unit of the title compound, C(14)H(11)ClN(2)O, contains two independent mol-ecules. In one mol-ecule, the two aromatic rings form a dihedral angle of 45.94 (16)°, while in the second mol-ecule this angle is 58.48 (16)°. In the crystal, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into two crystallographically independent sets of chains propagating along [001].

Entities:  

Year:  2009        PMID: 21578286      PMCID: PMC2971129          DOI: 10.1107/S1600536809040331

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of Schiff base ligands, see: Bedia et al. (2006 ▶). For related crystal structures, see: Fun et al. (2008 ▶); Alhadi et al. (2008 ▶); Nie (2008 ▶).

Experimental

Crystal data

C14H11ClN2O M = 258.70 Tetragonal, a = 13.5588 (17) Å c = 14.3993 (18) Å V = 2647.2 (6) Å3 Z = 8 Mo Kα radiation μ = 0.28 mm−1 T = 298 K 0.45 × 0.42 × 0.38 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.885, T max = 0.902 10838 measured reflections 4614 independent reflections 2766 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.093 S = 1.03 4614 reflections 325 parameters 1 restraint H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.23 e Å−3 Absolute structure: Flack (1983 ▶), 2105 Friedel pairs Flack parameter: −0.03 (7) Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809040331/cv2620sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809040331/cv2620Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H11ClN2ODx = 1.298 Mg m3
Mr = 258.70Mo Kα radiation, λ = 0.71073 Å
Tetragonal, P41Cell parameters from 2946 reflections
a = 13.5588 (17) Åθ = 2.6–25.3°
c = 14.3993 (18) ŵ = 0.28 mm1
V = 2647.2 (6) Å3T = 298 K
Z = 8Needle, colourless
F(000) = 10720.45 × 0.42 × 0.38 mm
Bruker SMART APEX CCD area-detector diffractometer4614 independent reflections
Radiation source: fine-focus sealed tube2766 reflections with I > 2σ(I)
graphiteRint = 0.043
φ and ω scansθmax = 25.0°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→16
Tmin = 0.885, Tmax = 0.902k = −6→16
10838 measured reflectionsl = −16→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H-atom parameters constrained
wR(F2) = 0.093w = 1/[σ2(Fo2) + (0.0242P)2 + 0.8271P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
4614 reflectionsΔρmax = 0.21 e Å3
325 parametersΔρmin = −0.23 e Å3
1 restraintAbsolute structure: Flack (1983), 2105 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.03 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.75607 (8)0.65234 (7)0.24623 (8)0.0633 (3)
Cl20.88744 (9)−0.28276 (9)0.02864 (13)0.1075 (6)
N10.4131 (2)0.5479 (2)0.3296 (2)0.0408 (8)
H10.41390.58290.27980.049*
N20.4972 (2)0.53797 (19)0.3835 (2)0.0405 (8)
N30.9519 (2)0.0803 (2)0.0223 (2)0.0495 (9)
H30.91120.07000.06700.059*
N41.0075 (2)0.0039 (2)−0.0142 (2)0.0494 (8)
O10.32675 (18)0.44465 (18)0.42320 (19)0.0536 (7)
O21.00890 (19)0.18599 (17)−0.0864 (2)0.0543 (7)
C10.3299 (3)0.5015 (3)0.3567 (3)0.0402 (9)
C20.2392 (2)0.5252 (3)0.3029 (3)0.0418 (9)
C30.1631 (3)0.4574 (3)0.3042 (3)0.0642 (13)
H3A0.17080.39790.33540.077*
C40.0752 (3)0.4782 (4)0.2591 (3)0.0827 (15)
H40.02500.43140.25770.099*
C50.0623 (3)0.5671 (4)0.2167 (4)0.0843 (16)
H50.00220.58190.18880.101*
C60.1368 (3)0.6345 (4)0.2148 (3)0.0742 (14)
H60.12780.69440.18450.089*
C70.2262 (3)0.6142 (3)0.2578 (3)0.0542 (10)
H70.27700.66020.25640.065*
C80.5738 (3)0.5796 (3)0.3501 (3)0.0425 (9)
H80.57040.61020.29240.051*
C90.6667 (2)0.5797 (2)0.4014 (3)0.0399 (9)
C100.7535 (3)0.6149 (2)0.3604 (3)0.0411 (9)
C110.8398 (3)0.6218 (3)0.4122 (3)0.0536 (11)
H110.89710.64580.38480.064*
C120.8404 (3)0.5931 (3)0.5037 (4)0.0599 (11)
H120.89800.59860.53830.072*
C130.7562 (3)0.5561 (3)0.5445 (3)0.0551 (11)
H130.75710.53510.60600.066*
C140.6715 (3)0.5508 (3)0.4937 (3)0.0485 (10)
H140.61470.52680.52200.058*
C150.9631 (2)0.1712 (3)−0.0140 (3)0.0429 (9)
C160.9164 (2)0.2533 (2)0.0384 (3)0.0382 (9)
C170.8908 (3)0.2462 (3)0.1306 (3)0.0509 (11)
H170.90090.18730.16230.061*
C180.8502 (3)0.3259 (3)0.1762 (3)0.0638 (13)
H180.83290.32070.23850.077*
C190.8352 (3)0.4131 (3)0.1296 (4)0.0666 (14)
H190.80800.46680.16050.080*
C200.8601 (3)0.4213 (3)0.0382 (4)0.0624 (13)
H200.84990.48050.00700.075*
C210.9006 (2)0.3416 (3)−0.0083 (3)0.0481 (10)
H210.91720.3471−0.07080.058*
C220.9846 (3)−0.0815 (3)0.0139 (3)0.0517 (11)
H220.9300−0.08980.05210.062*
C231.0434 (3)−0.1671 (3)−0.0132 (3)0.0534 (11)
C241.0065 (3)−0.2622 (3)−0.0086 (3)0.0586 (11)
C251.0630 (4)−0.3424 (3)−0.0335 (3)0.0702 (14)
H251.0364−0.4055−0.03000.084*
C261.1573 (4)−0.3296 (3)−0.0630 (3)0.0798 (15)
H261.1956−0.3839−0.07910.096*
C271.1960 (4)−0.2360 (4)−0.0689 (4)0.0951 (19)
H271.2604−0.2270−0.08960.114*
C281.1396 (3)−0.1556 (3)−0.0444 (4)0.0887 (18)
H281.1664−0.0926−0.04870.106*
U11U22U33U12U13U23
Cl10.0684 (7)0.0568 (6)0.0646 (7)−0.0023 (5)0.0190 (6)0.0062 (6)
Cl20.0785 (9)0.0592 (8)0.1849 (18)−0.0126 (7)0.0274 (10)0.0013 (9)
N10.0326 (18)0.049 (2)0.041 (2)−0.0026 (15)−0.0042 (15)0.0040 (15)
N20.0316 (17)0.0436 (18)0.046 (2)−0.0003 (15)−0.0021 (16)−0.0020 (15)
N30.053 (2)0.0354 (18)0.060 (2)0.0021 (15)0.0208 (17)−0.0004 (16)
N40.0535 (19)0.0383 (18)0.057 (2)0.0034 (16)0.0091 (17)−0.0023 (17)
O10.0470 (16)0.0590 (18)0.055 (2)−0.0098 (13)−0.0089 (13)0.0145 (15)
O20.0614 (18)0.0442 (16)0.0573 (19)−0.0025 (14)0.0186 (16)0.0003 (14)
C10.042 (2)0.038 (2)0.040 (2)−0.0029 (18)−0.0036 (19)0.0017 (19)
C20.033 (2)0.052 (2)0.040 (2)−0.0049 (19)−0.0028 (18)−0.0031 (19)
C30.049 (3)0.079 (3)0.065 (3)−0.018 (2)−0.010 (2)0.011 (3)
C40.049 (3)0.125 (4)0.074 (4)−0.029 (3)−0.015 (3)0.012 (3)
C50.039 (3)0.140 (5)0.073 (4)0.008 (3)−0.010 (2)0.011 (4)
C60.062 (3)0.089 (4)0.071 (4)0.017 (3)−0.009 (3)0.013 (3)
C70.042 (2)0.066 (3)0.054 (3)0.003 (2)−0.002 (2)0.003 (2)
C80.043 (2)0.043 (2)0.041 (2)0.0016 (19)0.0004 (19)0.0003 (19)
C90.033 (2)0.034 (2)0.052 (3)−0.0017 (17)0.0039 (19)−0.0032 (19)
C100.047 (2)0.030 (2)0.047 (3)−0.0011 (18)0.010 (2)−0.0036 (18)
C110.040 (2)0.041 (2)0.080 (4)−0.0033 (18)0.006 (2)−0.006 (2)
C120.045 (3)0.059 (3)0.076 (4)−0.002 (2)−0.009 (3)−0.006 (3)
C130.044 (3)0.067 (3)0.054 (3)0.000 (2)−0.004 (2)0.004 (2)
C140.038 (2)0.053 (2)0.054 (3)−0.0016 (18)−0.001 (2)0.005 (2)
C150.035 (2)0.038 (2)0.056 (3)−0.0038 (17)0.002 (2)−0.002 (2)
C160.032 (2)0.033 (2)0.050 (3)−0.0007 (16)0.0021 (17)−0.0049 (19)
C170.047 (2)0.048 (2)0.058 (3)0.003 (2)−0.001 (2)−0.003 (2)
C180.066 (3)0.063 (3)0.062 (3)0.000 (3)0.008 (2)−0.022 (3)
C190.054 (3)0.056 (3)0.090 (4)0.005 (2)−0.002 (3)−0.027 (3)
C200.053 (3)0.036 (2)0.098 (4)0.003 (2)−0.016 (3)−0.001 (3)
C210.043 (2)0.038 (2)0.063 (3)−0.0031 (18)−0.001 (2)−0.001 (2)
C220.054 (2)0.039 (2)0.062 (3)0.001 (2)0.017 (2)−0.001 (2)
C230.057 (3)0.044 (3)0.059 (3)0.010 (2)0.012 (2)0.006 (2)
C240.068 (3)0.041 (2)0.067 (3)0.003 (2)0.005 (3)−0.001 (2)
C250.091 (4)0.048 (3)0.072 (4)0.015 (3)0.003 (3)−0.002 (2)
C260.100 (4)0.059 (3)0.081 (4)0.034 (3)0.017 (3)0.006 (3)
C270.086 (4)0.070 (4)0.130 (5)0.017 (3)0.047 (4)0.015 (3)
C280.076 (3)0.055 (3)0.136 (5)0.006 (3)0.043 (3)0.012 (3)
Cl1—C101.721 (4)C11—H110.9300
Cl2—C241.724 (4)C12—C131.379 (5)
N1—C11.350 (4)C12—H120.9300
N1—N21.386 (4)C13—C141.364 (5)
N1—H10.8600C13—H130.9300
N2—C81.277 (4)C14—H140.9300
N3—C151.347 (4)C15—C161.487 (5)
N3—N41.385 (4)C16—C171.375 (5)
N3—H30.8600C16—C211.389 (5)
N4—C221.264 (4)C17—C181.379 (5)
O1—C11.230 (4)C17—H170.9300
O2—C151.230 (4)C18—C191.375 (6)
C1—C21.488 (5)C18—H180.9300
C2—C31.382 (5)C19—C201.364 (6)
C2—C71.381 (5)C19—H190.9300
C3—C41.387 (5)C20—C211.385 (5)
C3—H3A0.9300C20—H200.9300
C4—C51.362 (6)C21—H210.9300
C4—H40.9300C22—C231.461 (5)
C5—C61.362 (6)C22—H220.9300
C5—H50.9300C23—C241.385 (5)
C6—C71.389 (5)C23—C281.388 (5)
C6—H60.9300C24—C251.376 (5)
C7—H70.9300C25—C261.359 (6)
C8—C91.459 (5)C25—H250.9300
C8—H80.9300C26—C271.376 (6)
C9—C141.388 (5)C26—H260.9300
C9—C101.400 (5)C27—C281.378 (6)
C10—C111.390 (5)C27—H270.9300
C11—C121.374 (6)C28—H280.9300
C1—N1—N2118.7 (3)C12—C13—H13120.4
C1—N1—H1120.6C13—C14—C9122.6 (4)
N2—N1—H1120.6C13—C14—H14118.7
C8—N2—N1114.5 (3)C9—C14—H14118.7
C15—N3—N4118.4 (3)O2—C15—N3122.4 (3)
C15—N3—H3120.8O2—C15—C16121.5 (3)
N4—N3—H3120.8N3—C15—C16116.1 (4)
C22—N4—N3115.5 (3)C17—C16—C21119.3 (4)
O1—C1—N1123.1 (3)C17—C16—C15123.0 (3)
O1—C1—C2120.8 (3)C21—C16—C15117.7 (4)
N1—C1—C2116.1 (3)C16—C17—C18120.3 (4)
C3—C2—C7119.4 (3)C16—C17—H17119.8
C3—C2—C1117.8 (3)C18—C17—H17119.8
C7—C2—C1122.6 (3)C19—C18—C17120.0 (5)
C2—C3—C4120.0 (4)C19—C18—H18120.0
C2—C3—H3A120.0C17—C18—H18120.0
C4—C3—H3A120.0C20—C19—C18120.3 (4)
C5—C4—C3120.0 (4)C20—C19—H19119.9
C5—C4—H4120.0C18—C19—H19119.9
C3—C4—H4120.0C19—C20—C21120.1 (4)
C6—C5—C4120.5 (4)C19—C20—H20120.0
C6—C5—H5119.8C21—C20—H20120.0
C4—C5—H5119.8C20—C21—C16120.0 (4)
C5—C6—C7120.3 (5)C20—C21—H21120.0
C5—C6—H6119.8C16—C21—H21120.0
C7—C6—H6119.8N4—C22—C23120.5 (4)
C2—C7—C6119.6 (4)N4—C22—H22119.7
C2—C7—H7120.2C23—C22—H22119.7
C6—C7—H7120.2C24—C23—C28117.4 (4)
N2—C8—C9120.8 (3)C24—C23—C22122.0 (4)
N2—C8—H8119.6C28—C23—C22120.6 (4)
C9—C8—H8119.6C25—C24—C23121.5 (4)
C14—C9—C10117.4 (3)C25—C24—Cl2118.3 (3)
C14—C9—C8121.7 (3)C23—C24—Cl2120.2 (3)
C10—C9—C8120.8 (4)C26—C25—C24120.3 (4)
C11—C10—C9120.3 (4)C26—C25—H25119.9
C11—C10—Cl1118.4 (3)C24—C25—H25119.9
C9—C10—Cl1121.3 (3)C25—C26—C27119.7 (4)
C12—C11—C10120.0 (4)C25—C26—H26120.1
C12—C11—H11120.0C27—C26—H26120.1
C10—C11—H11120.0C26—C27—C28120.2 (5)
C11—C12—C13120.5 (4)C26—C27—H27119.9
C11—C12—H12119.8C28—C27—H27119.9
C13—C12—H12119.8C27—C28—C23121.0 (4)
C14—C13—C12119.2 (4)C27—C28—H28119.5
C14—C13—H13120.4C23—C28—H28119.5
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.862.012.854 (4)168
N3—H3···O2ii0.862.092.928 (4)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.862.012.854 (4)168
N3—H3⋯O2ii0.862.092.928 (4)166

Symmetry codes: (i) ; (ii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and characterization of novel hydrazide-hydrazones and the study of their structure-antituberculosis activity.

Authors:  Koçyiğit-Kaymakçioğlu Bedia; Oruç Elçin; Unsalan Seda; Kandemirli Fatma; Shvets Nathaly; Rollas Sevim; Anatholy Dimoglo
Journal:  Eur J Med Chem       Date:  2006-08-17       Impact factor: 6.514

3.  N'-[4-(Dimethyl-amino)benzyl-idene]-3-hydroxy-benzohydrazide.

Authors:  Yi Nie
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-18

4.  N'-(5-Bromo-2-hydroxy-benzyl-idene)-3,4,5-trihydroxy-benzohydrazide dihydrate.

Authors:  Abeer A Alhadi; Hapipah M Ali; Subramaniam Puvaneswary; Ward T Robinson; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-23

5.  4-Chloro-N'-[(Z)-4-(dimethyl-amino)benzyl-idene]benzohydrazide mono-hydrate.

Authors:  Hoong-Kun Fun; P S Patil; Samuel Robinson Jebas; K V Sujith; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-26
  5 in total
  1 in total

1.  N'-Cyclo-hexyl-idenebenzohydrazide.

Authors:  Xiuping Ju; Yan Qiao; Zhiqing Gao; Lingqian Kong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-09
  1 in total

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