Literature DB >> 21578250

4-(2-Thienylmethyl-eneamino)benzoic acid.

Hui Cui, Xuquan Tao.   

Abstract

In the title mol-ecule, C(12)H(9)NO(2)S, the dihedral angle between benzene and thio-phene rings is 41.91 (8)°. The crystal packing exhibits short inter-molecular O-H⋯O and C-H⋯O hydrogen-bonding contacts.

Entities:  

Year:  2009        PMID: 21578250      PMCID: PMC2971023          DOI: 10.1107/S1600536809039208

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of substituted thio­phenes, see: Koike et al. (1999 ▶). For the anti­cancer activity of Schiff bases, see: Chakraborty & Patel (1996 ▶). For a related structure, see: Hu et al. (2008 ▶).

Experimental

Crystal data

C12H9NO2S M = 231.26 Monoclinic, a = 3.8801 (3) Å b = 10.0849 (11) Å c = 27.380 (3) Å β = 93.185 (1)° V = 1069.74 (18) Å3 Z = 4 Mo Kα radiation μ = 0.28 mm−1 T = 298 K 0.43 × 0.20 × 0.12 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.888, T max = 0.967 5213 measured reflections 1887 independent reflections 1496 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.140 S = 1.09 1887 reflections 145 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809039208/bq2161sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809039208/bq2161Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H9NO2SF(000) = 480
Mr = 231.26Dx = 1.436 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1697 reflections
a = 3.8801 (3) Åθ = 3.0–24.6°
b = 10.0849 (11) ŵ = 0.28 mm1
c = 27.380 (3) ÅT = 298 K
β = 93.185 (1)°Block, red
V = 1069.74 (18) Å30.43 × 0.20 × 0.12 mm
Z = 4
Bruker SMART APEX CCD area-detector diffractometer1887 independent reflections
Radiation source: fine-focus sealed tube1496 reflections with I > 2σ(I)
graphiteRint = 0.044
φ and ω scansθmax = 25.0°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −4→4
Tmin = 0.888, Tmax = 0.967k = −12→9
5213 measured reflectionsl = −29→32
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0616P)2 + 0.4613P] where P = (Fo2 + 2Fc2)/3
1887 reflections(Δ/σ)max < 0.001
145 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.4137 (7)0.4083 (2)0.34590 (9)0.0410 (6)
O10.9679 (7)0.8245 (2)0.50746 (8)0.0580 (7)
H11.03830.89430.51970.087*
O20.7517 (7)0.9632 (2)0.45013 (7)0.0543 (6)
S10.3211 (2)0.18720 (8)0.26947 (3)0.0476 (3)
C10.2843 (8)0.3008 (3)0.36133 (11)0.0438 (8)
H1A0.22970.29540.39390.053*
C20.2192 (8)0.1869 (3)0.32997 (10)0.0389 (7)
C30.0828 (9)0.0673 (3)0.34261 (11)0.0472 (8)
H30.01140.04830.37370.057*
C40.0618 (9)−0.0239 (3)0.30361 (12)0.0506 (9)
H4−0.0252−0.10940.30610.061*
C50.1821 (9)0.0267 (3)0.26221 (12)0.0515 (9)
H50.1888−0.02020.23300.062*
C60.8065 (8)0.8483 (3)0.46603 (10)0.0397 (7)
C70.6845 (7)0.7322 (3)0.43688 (9)0.0354 (7)
C80.7347 (8)0.6033 (3)0.45455 (10)0.0403 (7)
H80.83200.59020.48600.048*
C90.6413 (8)0.4952 (3)0.42586 (10)0.0419 (8)
H90.67740.40980.43790.050*
C100.4922 (7)0.5141 (3)0.37856 (10)0.0358 (7)
C110.4398 (8)0.6428 (3)0.36128 (10)0.0407 (7)
H110.34130.65610.32990.049*
C120.5320 (8)0.7508 (3)0.39001 (10)0.0395 (7)
H120.49240.83620.37810.047*
U11U22U33U12U13U23
N10.0479 (16)0.0341 (14)0.0407 (14)−0.0028 (12)−0.0002 (11)−0.0039 (11)
O10.0861 (18)0.0389 (13)0.0463 (13)−0.0045 (12)−0.0194 (12)−0.0047 (10)
O20.0839 (18)0.0321 (12)0.0455 (12)−0.0027 (12)−0.0094 (11)−0.0006 (10)
S10.0579 (6)0.0426 (5)0.0424 (5)−0.0005 (4)0.0042 (4)−0.0011 (3)
C10.0488 (19)0.0427 (18)0.0404 (16)0.0005 (15)0.0060 (14)−0.0051 (14)
C20.0392 (17)0.0358 (16)0.0414 (16)0.0019 (14)−0.0008 (13)−0.0027 (13)
C30.055 (2)0.0433 (19)0.0432 (17)−0.0036 (16)0.0038 (15)0.0041 (14)
C40.055 (2)0.0341 (17)0.062 (2)−0.0043 (15)−0.0028 (17)−0.0020 (15)
C50.057 (2)0.0443 (19)0.052 (2)0.0033 (17)−0.0097 (16)−0.0126 (16)
C60.0469 (19)0.0373 (17)0.0349 (15)0.0007 (14)0.0025 (13)−0.0004 (13)
C70.0389 (17)0.0316 (15)0.0356 (15)−0.0002 (13)0.0011 (12)−0.0021 (12)
C80.0497 (19)0.0375 (16)0.0327 (15)0.0014 (14)−0.0056 (13)0.0000 (13)
C90.052 (2)0.0308 (16)0.0426 (17)0.0016 (14)−0.0003 (14)0.0016 (13)
C100.0376 (17)0.0364 (16)0.0335 (15)−0.0015 (13)0.0025 (12)−0.0049 (12)
C110.0470 (19)0.0400 (17)0.0341 (15)−0.0011 (15)−0.0058 (13)0.0013 (13)
C120.0477 (18)0.0302 (15)0.0403 (16)0.0011 (14)−0.0005 (13)0.0020 (13)
N1—C11.277 (4)C4—H40.9300
N1—C101.414 (3)C5—H50.9300
O1—C61.287 (3)C6—C71.480 (4)
O1—H10.8200C7—C121.396 (4)
O2—C61.252 (3)C7—C81.397 (4)
S1—C51.714 (3)C8—C91.380 (4)
S1—C21.724 (3)C8—H80.9300
C1—C21.448 (4)C9—C101.402 (4)
C1—H1A0.9300C9—H90.9300
C2—C31.369 (4)C10—C111.392 (4)
C3—C41.408 (4)C11—C121.379 (4)
C3—H30.9300C11—H110.9300
C4—C51.350 (4)C12—H120.9300
C1—N1—C10120.4 (3)O1—C6—C7116.9 (3)
C6—O1—H1109.5C12—C7—C8119.2 (3)
C5—S1—C291.28 (15)C12—C7—C6119.8 (3)
N1—C1—C2122.4 (3)C8—C7—C6121.0 (2)
N1—C1—H1A118.8C9—C8—C7120.7 (3)
C2—C1—H1A118.8C9—C8—H8119.6
C3—C2—C1127.3 (3)C7—C8—H8119.6
C3—C2—S1110.9 (2)C8—C9—C10120.0 (3)
C1—C2—S1121.8 (2)C8—C9—H9120.0
C2—C3—C4113.0 (3)C10—C9—H9120.0
C2—C3—H3123.5C11—C10—C9119.0 (3)
C4—C3—H3123.5C11—C10—N1117.8 (2)
C5—C4—C3112.4 (3)C9—C10—N1123.0 (3)
C5—C4—H4123.8C12—C11—C10120.9 (3)
C3—C4—H4123.8C12—C11—H11119.5
C4—C5—S1112.4 (2)C10—C11—H11119.5
C4—C5—H5123.8C11—C12—C7120.1 (3)
S1—C5—H5123.8C11—C12—H12120.0
O2—C6—O1123.0 (3)C7—C12—H12120.0
O2—C6—C7120.1 (3)
C10—N1—C1—C2−176.1 (3)O1—C6—C7—C81.8 (4)
N1—C1—C2—C3179.9 (3)C12—C7—C8—C91.2 (5)
N1—C1—C2—S11.4 (4)C6—C7—C8—C9−175.6 (3)
C5—S1—C2—C3−0.4 (3)C7—C8—C9—C10−0.4 (5)
C5—S1—C2—C1178.3 (3)C8—C9—C10—C11−0.1 (4)
C1—C2—C3—C4−178.4 (3)C8—C9—C10—N1175.2 (3)
S1—C2—C3—C40.2 (4)C1—N1—C10—C11−143.8 (3)
C2—C3—C4—C50.2 (4)C1—N1—C10—C940.8 (4)
C3—C4—C5—S1−0.5 (4)C9—C10—C11—C12−0.1 (5)
C2—S1—C5—C40.5 (3)N1—C10—C11—C12−175.7 (3)
O2—C6—C7—C124.9 (4)C10—C11—C12—C70.9 (5)
O1—C6—C7—C12−175.0 (3)C8—C7—C12—C11−1.5 (5)
O2—C6—C7—C8−178.2 (3)C6—C7—C12—C11175.4 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.821.832.641 (3)172
C3—H3···O2ii0.932.523.441 (4)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.821.832.641 (3)172
C3—H3⋯O2ii0.932.523.441 (4)169

Symmetry codes: (i) ; (ii) .

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Authors:  George M Sheldrick
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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06
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