Literature DB >> 21578045

Poly[[aqua-(μ-4,4'-bipyridine-κN:N')(μ(3)-2-nitro-5-sulfonatobenzoato-κO:O:O)copper(II)] 4,4'-bipyridine hemisolvate].

Zheyu Zhang1.   

Abstract

In the title compound, [Cu(C(7)H(3)NO(7)S)(C(10)H(8)N(2))(H(2)O)]·0.5C(10)H(8)N(2), the Cu(II) atom is six-coordinated by two N atoms from two different bipyridine (bipy) ligands, one sulfonate O atom and two carboxyl-ate O atoms from three 2-nitro-5-sulfonatobenzoate ligands and one water O atom in a distorted octa-hedral geometry. The bipy solvent mol-ecule lies on an inversion center. The Cu(II) atoms are linked by the bipy ligands, forming one-dimensional chains, which are connected by the 2-nitro-5-sulfonatobenzoate ligands into a two-dimensional layer-like network. The two-dimensional structure is extended by O-H⋯O and O-H⋯N hydrogen bonds into a three-dimensional supra-molecular network.

Entities:  

Year:  2009        PMID: 21578045      PMCID: PMC2971335          DOI: 10.1107/S1600536809039294

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to copper(II) sulfonate complexes, see: Du et al. (2009 ▶); Li et al. (2009 ▶); Liu et al. (2009 ▶); Sonnauer & Stock (2008 ▶); Sonnauer et al. (2009 ▶). For related structures, see: Dong et al. (2009 ▶).

Experimental

Crystal data

[Cu(C7H3NO7S)(C10H8N2)(H2O)]·0.5C10H8N2 M = 561.00 Monoclinic, a = 11.4549 (17) Å b = 11.0447 (16) Å c = 17.089 (3) Å β = 92.738 (3)° V = 2159.5 (5) Å3 Z = 4 Mo Kα radiation μ = 1.17 mm−1 T = 293 K 0.23 × 0.17 × 0.14 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.767, T max = 0.850 11892 measured reflections 4260 independent reflections 2560 reflections with I > 2σ(I) R int = 0.088

Refinement

R[F 2 > 2σ(F 2)] = 0.065 wR(F 2) = 0.135 S = 1.00 4260 reflections 331 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.86 e Å−3 Δρmin = −0.46 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809039294/hy2230sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809039294/hy2230Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C7H3NO7S)(C10H8N2)(H2O)]·0.5C10H8N2F(000) = 1144
Mr = 561.00Dx = 1.725 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4260 reflections
a = 11.4549 (17) Åθ = 1.8–26.0°
b = 11.0447 (16) ŵ = 1.17 mm1
c = 17.089 (3) ÅT = 293 K
β = 92.738 (3)°Block, blue
V = 2159.5 (5) Å30.23 × 0.17 × 0.14 mm
Z = 4
Bruker SMART APEX CCD diffractometer4260 independent reflections
Radiation source: fine-focus sealed tube2560 reflections with I > 2σ(I)
graphiteRint = 0.088
φ and ω scansθmax = 26.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −14→14
Tmin = 0.767, Tmax = 0.850k = −13→13
11892 measured reflectionsl = −21→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.065Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.135H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0455P)2] where P = (Fo2 + 2Fc2)/3
4260 reflections(Δ/σ)max = 0.001
331 parametersΔρmax = 0.86 e Å3
0 restraintsΔρmin = −0.46 e Å3
xyzUiso*/Ueq
C10.2223 (4)0.7923 (4)0.6944 (3)0.0215 (13)
C20.2994 (4)0.7254 (4)0.6511 (3)0.0198 (12)
H20.35650.76560.62430.024*
C30.2929 (4)0.5989 (5)0.6472 (3)0.0195 (12)
C40.2051 (5)0.5449 (4)0.6866 (3)0.0224 (13)
C50.1244 (5)0.6090 (5)0.7293 (4)0.0321 (15)
H50.06490.56920.75420.039*
C60.1356 (5)0.7338 (5)0.7335 (4)0.0313 (15)
H60.08460.77860.76270.038*
C70.3842 (5)0.5338 (4)0.6006 (3)0.0177 (12)
C80.5609 (4)0.2511 (4)0.6504 (3)0.0229 (13)
H80.51290.29360.68310.027*
C90.5560 (4)0.1262 (4)0.6501 (3)0.0237 (13)
H90.50670.08600.68310.028*
C100.6248 (5)0.0607 (4)0.6005 (3)0.0183 (13)
C110.6982 (4)0.1266 (4)0.5532 (3)0.0205 (13)
H110.74540.08690.51860.025*
C120.6997 (4)0.2501 (4)0.5582 (3)0.0208 (13)
H120.75040.29240.52730.025*
C130.6233 (4)−0.0732 (4)0.5994 (3)0.0191 (13)
C140.6096 (4)−0.1390 (4)0.6673 (3)0.0207 (13)
H140.5960−0.09920.71400.025*
C150.6162 (5)−0.2632 (4)0.6656 (3)0.0241 (13)
H150.6098−0.30570.71220.029*
C160.6431 (5)−0.2628 (4)0.5338 (3)0.0248 (13)
H160.6541−0.30540.48780.030*
C170.6397 (5)−0.1375 (4)0.5304 (3)0.0236 (13)
H170.6482−0.09710.48330.028*
C180.0395 (6)0.2255 (6)1.0226 (4)0.052 (2)
H180.03160.16411.05930.063*
C190.0134 (6)0.3431 (6)1.0445 (4)0.0483 (19)
H19−0.00570.35971.09570.058*
C200.0160 (5)0.4360 (5)0.9900 (4)0.0353 (16)
C210.0488 (5)0.4042 (6)0.9165 (4)0.0408 (17)
H210.05090.46290.87760.049*
C220.0790 (5)0.2855 (6)0.8995 (4)0.0421 (17)
H220.10280.26770.84950.051*
N10.1916 (4)0.4121 (4)0.6833 (3)0.0327 (13)
N20.6323 (4)0.3136 (3)0.6052 (3)0.0212 (11)
N30.6313 (4)−0.3253 (4)0.5997 (3)0.0194 (10)
N40.0754 (4)0.1954 (5)0.9520 (3)0.0406 (14)
O10.1331 (3)0.9957 (3)0.7351 (2)0.0321 (9)
O20.3416 (3)0.9755 (3)0.7461 (2)0.0283 (10)
O30.2451 (4)0.9910 (3)0.6178 (2)0.0373 (10)
O40.4740 (3)0.5046 (3)0.6409 (2)0.0223 (8)
O50.3643 (3)0.5231 (3)0.5297 (2)0.0277 (9)
O60.8116 (3)0.4917 (4)0.6061 (2)0.0259 (9)
O70.2618 (3)0.3519 (3)0.6486 (3)0.0376 (11)
O80.1112 (4)0.3662 (4)0.7165 (3)0.0676 (17)
S10.23675 (13)0.95326 (12)0.69752 (9)0.0243 (4)
Cu10.63413 (5)0.49342 (5)0.60435 (4)0.0195 (2)
H1A0.833 (5)0.486 (5)0.653 (3)0.029*
H1B0.843 (5)0.543 (5)0.576 (3)0.029*
U11U22U33U12U13U23
C10.025 (3)0.019 (3)0.021 (3)0.002 (2)−0.001 (3)−0.003 (3)
C20.024 (3)0.018 (3)0.019 (3)−0.002 (2)0.004 (2)0.001 (2)
C30.020 (3)0.018 (3)0.021 (3)0.003 (2)0.001 (3)−0.002 (3)
C40.027 (3)0.013 (3)0.027 (4)0.001 (2)0.005 (3)0.005 (2)
C50.027 (3)0.029 (3)0.042 (4)−0.001 (3)0.018 (3)0.007 (3)
C60.032 (3)0.026 (3)0.037 (4)0.009 (3)0.013 (3)0.001 (3)
C70.030 (3)0.007 (3)0.016 (3)−0.005 (2)0.006 (3)0.001 (2)
C80.029 (3)0.015 (3)0.027 (3)0.000 (2)0.014 (3)0.001 (3)
C90.030 (3)0.014 (3)0.028 (4)−0.004 (2)0.007 (3)0.002 (3)
C100.029 (3)0.005 (2)0.020 (3)0.002 (2)−0.007 (3)0.001 (2)
C110.028 (3)0.011 (3)0.024 (3)−0.001 (2)0.010 (3)−0.004 (2)
C120.026 (3)0.011 (3)0.027 (3)−0.001 (2)0.007 (3)0.004 (2)
C130.024 (3)0.009 (3)0.025 (4)0.000 (2)0.005 (3)−0.002 (3)
C140.030 (3)0.013 (3)0.021 (3)0.002 (2)0.010 (3)0.000 (2)
C150.032 (3)0.016 (3)0.025 (4)−0.001 (2)0.008 (3)0.005 (3)
C160.040 (3)0.014 (3)0.022 (3)0.003 (3)0.011 (3)−0.006 (3)
C170.035 (3)0.015 (3)0.021 (3)−0.001 (3)0.006 (3)0.006 (3)
C180.068 (5)0.043 (4)0.048 (5)0.014 (4)0.020 (4)0.011 (4)
C190.066 (5)0.034 (4)0.045 (5)0.019 (4)0.013 (4)−0.004 (4)
C200.030 (4)0.039 (4)0.038 (4)0.007 (3)0.004 (3)−0.004 (3)
C210.049 (4)0.037 (4)0.037 (4)0.010 (3)0.003 (4)0.000 (3)
C220.047 (4)0.043 (4)0.037 (4)0.007 (3)0.004 (3)−0.013 (4)
N10.033 (3)0.025 (3)0.041 (4)−0.006 (2)0.006 (3)0.001 (3)
N20.029 (3)0.011 (2)0.024 (3)0.002 (2)0.005 (2)−0.003 (2)
N30.022 (2)0.011 (2)0.026 (3)−0.0013 (19)0.005 (2)0.001 (2)
N40.038 (3)0.036 (3)0.048 (4)0.002 (2)0.000 (3)−0.003 (3)
O10.031 (2)0.026 (2)0.039 (2)0.0052 (19)0.0013 (19)−0.006 (2)
O20.029 (2)0.020 (2)0.036 (3)−0.0042 (16)0.0006 (19)−0.0048 (19)
O30.065 (3)0.023 (2)0.025 (2)0.002 (2)0.002 (2)0.001 (2)
O40.0249 (19)0.0142 (18)0.028 (2)0.0021 (17)0.0053 (17)0.0024 (19)
O50.045 (2)0.017 (2)0.021 (2)0.0056 (17)0.0079 (19)−0.0030 (18)
O60.030 (2)0.021 (2)0.027 (2)−0.0013 (18)0.0064 (19)0.006 (2)
O70.046 (3)0.019 (2)0.049 (3)−0.005 (2)0.019 (2)−0.007 (2)
O80.066 (3)0.035 (3)0.106 (5)−0.012 (2)0.056 (3)0.005 (3)
S10.0298 (8)0.0166 (7)0.0269 (9)0.0041 (6)0.0063 (7)−0.0020 (6)
Cu10.0252 (3)0.0066 (3)0.0273 (4)0.0008 (3)0.0082 (3)−0.0005 (3)
C1—C61.382 (7)C15—H150.9300
C1—C21.391 (7)C16—N31.334 (6)
C1—S11.787 (5)C16—C171.385 (7)
C2—C31.401 (6)C16—H160.9300
C2—H20.9300C17—H170.9300
C3—C41.373 (7)C18—N41.335 (8)
C3—C71.525 (7)C18—C191.389 (9)
C4—C51.398 (7)C18—H180.9300
C4—N11.475 (7)C19—C201.386 (9)
C5—C61.386 (7)C19—H190.9300
C5—H50.9300C20—C211.375 (8)
C6—H60.9300C20—C20i1.505 (11)
C7—O51.227 (6)C21—C221.390 (8)
C7—O41.254 (6)C21—H210.9300
C8—N21.341 (6)C22—N41.342 (8)
C8—C91.381 (7)C22—H220.9300
C8—H80.9300N1—O81.216 (6)
C9—C101.388 (7)N1—O71.219 (6)
C9—H90.9300O1—S11.454 (4)
C10—C111.398 (7)O2—S11.448 (4)
C10—C131.479 (6)O3—S11.432 (4)
C11—C121.366 (6)O6—H1A0.83 (5)
C11—H110.9300O6—H1B0.86 (5)
C12—N21.339 (6)Cu1—N21.986 (4)
C12—H120.9300Cu1—N3ii2.004 (4)
C13—C141.384 (7)Cu1—O2iii2.565 (4)
C13—C171.397 (7)Cu1—O41.969 (3)
C14—C151.374 (6)Cu1—O5iv2.299 (4)
C14—H140.9300Cu1—O62.032 (4)
C15—N31.337 (6)
C6—C1—C2119.9 (5)N4—C18—C19123.8 (7)
C6—C1—S1121.2 (4)N4—C18—H18118.1
C2—C1—S1118.9 (4)C19—C18—H18118.1
C1—C2—C3121.4 (5)C20—C19—C18119.9 (7)
C1—C2—H2119.3C20—C19—H19120.0
C3—C2—H2119.3C18—C19—H19120.0
C4—C3—C2116.7 (5)C21—C20—C19116.2 (6)
C4—C3—C7126.0 (5)C21—C20—C20i121.8 (8)
C2—C3—C7117.3 (5)C19—C20—C20i122.0 (8)
C3—C4—C5123.6 (5)C20—C21—C22120.9 (6)
C3—C4—N1119.4 (5)C20—C21—H21119.5
C5—C4—N1116.9 (5)C22—C21—H21119.5
C6—C5—C4117.9 (5)N4—C22—C21122.9 (6)
C6—C5—H5121.0N4—C22—H22118.6
C4—C5—H5121.0C21—C22—H22118.6
C1—C6—C5120.5 (5)O8—N1—O7122.2 (5)
C1—C6—H6119.8O8—N1—C4118.4 (5)
C5—C6—H6119.8O7—N1—C4119.4 (5)
O5—C7—O4128.8 (5)C12—N2—C8117.4 (4)
O5—C7—C3117.5 (5)C12—N2—Cu1120.8 (4)
O4—C7—C3113.6 (5)C8—N2—Cu1121.7 (4)
N2—C8—C9122.5 (5)C16—N3—C15117.9 (4)
N2—C8—H8118.7C16—N3—Cu1v123.2 (4)
C9—C8—H8118.7C15—N3—Cu1v118.8 (4)
C8—C9—C10119.9 (5)C18—N4—C22116.2 (6)
C8—C9—H9120.0C7—O4—Cu1126.4 (3)
C10—C9—H9120.0C7—O5—Cu1iv168.9 (4)
C9—C10—C11117.2 (4)Cu1—O6—H1A105 (4)
C9—C10—C13121.5 (5)Cu1—O6—H1B115 (4)
C11—C10—C13121.4 (5)H1A—O6—H1B122 (5)
C12—C11—C10119.3 (5)O3—S1—O2113.9 (2)
C12—C11—H11120.4O3—S1—O1114.8 (2)
C10—C11—H11120.4O2—S1—O1111.4 (2)
N2—C12—C11123.7 (5)O3—S1—C1105.8 (3)
N2—C12—H12118.1O2—S1—C1105.0 (2)
C11—C12—H12118.1O1—S1—C1104.9 (2)
C14—C13—C17117.7 (5)O4—Cu1—N292.84 (16)
C14—C13—C10121.1 (5)O4—Cu1—N3ii86.36 (16)
C17—C13—C10121.1 (5)N2—Cu1—N3ii177.66 (18)
C15—C14—C13119.9 (5)O4—Cu1—O6160.42 (16)
C15—C14—H14120.1N2—Cu1—O690.09 (17)
C13—C14—H14120.1N3ii—Cu1—O691.39 (17)
N3—C15—C14122.6 (5)O4—Cu1—O5iv111.89 (14)
N3—C15—H15118.7N2—Cu1—O5iv85.92 (16)
C14—C15—H15118.7N3ii—Cu1—O5iv92.34 (16)
N3—C16—C17123.2 (5)O6—Cu1—O5iv87.62 (15)
N3—C16—H16118.4O2iii—Cu1—N285.20 (17)
C17—C16—H16118.4O2iii—Cu1—N3ii96.74 (17)
C16—C17—C13118.5 (5)O2iii—Cu1—O475.35 (13)
C16—C17—H17120.7O2iii—Cu1—O5iv168.81 (12)
C13—C17—H17120.7O2iii—Cu1—O685.63 (13)
C6—C1—C2—C3−1.2 (8)C20i—C20—C21—C22179.5 (7)
S1—C1—C2—C3179.4 (4)C20—C21—C22—N41.7 (10)
C1—C2—C3—C41.4 (8)C3—C4—N1—O8−177.7 (6)
C1—C2—C3—C7−177.9 (5)C5—C4—N1—O80.9 (8)
C2—C3—C4—C50.1 (9)C3—C4—N1—O73.5 (8)
C7—C3—C4—C5179.2 (5)C5—C4—N1—O7−178.0 (5)
C2—C3—C4—N1178.5 (5)C11—C12—N2—C81.0 (8)
C7—C3—C4—N1−2.3 (9)C11—C12—N2—Cu1−176.6 (4)
C3—C4—C5—C6−1.7 (9)C9—C8—N2—C120.5 (8)
N1—C4—C5—C6179.8 (5)C9—C8—N2—Cu1178.1 (4)
C2—C1—C6—C5−0.5 (9)C17—C16—N3—C15−0.4 (8)
S1—C1—C6—C5178.9 (5)C17—C16—N3—Cu1v179.2 (4)
C4—C5—C6—C11.9 (9)C14—C15—N3—C161.6 (8)
C4—C3—C7—O595.3 (7)C14—C15—N3—Cu1v−178.0 (4)
C2—C3—C7—O5−85.6 (6)C19—C18—N4—C22−3.8 (10)
C4—C3—C7—O4−88.7 (7)C21—C22—N4—C180.7 (9)
C2—C3—C7—O490.4 (6)O5—C7—O4—Cu126.7 (7)
N2—C8—C9—C10−1.5 (9)C3—C7—O4—Cu1−148.7 (3)
C8—C9—C10—C110.9 (8)O4—C7—O5—Cu1iv−29 (2)
C8—C9—C10—C13179.0 (5)C3—C7—O5—Cu1iv146.5 (15)
C9—C10—C11—C120.6 (8)C6—C1—S1—O3−130.7 (5)
C13—C10—C11—C12−177.6 (5)C2—C1—S1—O348.7 (5)
C10—C11—C12—N2−1.6 (8)C6—C1—S1—O2108.6 (5)
C9—C10—C13—C14−35.0 (8)C2—C1—S1—O2−72.0 (5)
C11—C10—C13—C14143.0 (5)C6—C1—S1—O1−9.0 (5)
C9—C10—C13—C17147.2 (5)C2—C1—S1—O1170.5 (4)
C11—C10—C13—C17−34.7 (8)C7—O4—Cu1—N2−106.1 (4)
C17—C13—C14—C152.0 (8)C7—O4—Cu1—N3ii71.7 (4)
C10—C13—C14—C15−175.8 (5)C7—O4—Cu1—O6155.6 (5)
C13—C14—C15—N3−2.5 (8)C7—O4—Cu1—O5iv−19.4 (4)
N3—C16—C17—C130.1 (8)C12—N2—Cu1—O4153.9 (4)
C14—C13—C17—C16−0.9 (8)C8—N2—Cu1—O4−23.6 (4)
C10—C13—C17—C16176.9 (5)C12—N2—Cu1—O6−45.4 (4)
N4—C18—C19—C204.6 (11)C8—N2—Cu1—O6137.1 (4)
C18—C19—C20—C21−2.0 (10)C12—N2—Cu1—O5iv42.2 (4)
C18—C19—C20—C20i177.6 (7)C8—N2—Cu1—O5iv−135.3 (4)
C19—C20—C21—C22−0.9 (10)
D—H···AD—HH···AD···AD—H···A
O6—H1A···O1iii0.83 (5)1.94 (5)2.758 (5)171 (6)
O6—H1B···N4vi0.86 (5)2.00 (5)2.801 (6)156 (5)
Table 1

Selected bond lengths (Å)

Cu1—N21.986 (4)
Cu1—N3i2.004 (4)
Cu1—O2ii2.565 (4)
Cu1—O41.969 (3)
Cu1—O5iii2.299 (4)
Cu1—O62.032 (4)

Symmetry codes: (i) ; (ii) ; (iii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H1A⋯O1ii0.83 (5)1.94 (5)2.758 (5)171 (6)
O6—H1B⋯N4iv0.86 (5)2.00 (5)2.801 (6)156 (5)

Symmetry codes: (ii) ; (iv) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Tetra-aqua-bis[4-(4-pyrid-yl)pyrimidine-2-sulfonato]copper(II) dihydrate.

Authors:  Lei Li; Gang Xu; Hai-Bin Zhu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-02
  2 in total

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