Literature DB >> 21577917

4-[1-(Hydroxy-imino)ethyl]-N-(4-nitro-benzyl-idene)aniline.

Li Zhao1, Wen-Kui Dong, Jian-Chao Wu, Yin-Xia Sun, Li Xu.   

Abstract

In the title compound, C(15)H(13)N(3)O(3), the dihedral angle formed by the two benzene rings is 44.23 (2)°. The crystal structure is stabilized by aromatic π-π stacking inter-actions, with centroid-centroid distances of 3.825 (3) and 3.870 (4) Å between the aniline and the nitro-benzene rings of neighbouring mol-ecules, respectively. In addition, the stacked mol-ecules exhibit inter-molecular C-H⋯N and C-H⋯O inter-actions.

Entities:  

Year:  2009        PMID: 21577917      PMCID: PMC2970305          DOI: 10.1107/S1600536809033753

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases, see: Lozier et al. (1975 ▶). For the synthesis, see: Rafiq et al. (2008 ▶); Duan et al. (2007 ▶); Dong et al. (2008 ▶). For related structures, see: Bomfim et al. (2005 ▶); Fun et al. (2008 ▶).

Experimental

Crystal data

C15H13N3O3 M = 283.28 Orthorhombic, a = 7.375 (1) Å b = 10.770 (2) Å c = 16.906 (2) Å V = 1342.8 (3) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.50 × 0.35 × 0.10 mm

Data collection

Bruker SMART1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.952, T max = 0.990 7656 measured reflections 1700 independent reflections 899 reflections with I > 2σ(I) R int = 0.068

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.115 S = 1.03 1700 reflections 195 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks 2, I. DOI: 10.1107/S1600536809033753/lx2109sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033753/lx2109Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13N3O3F(000) = 592
Mr = 283.28Dx = 1.401 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 1209 reflections
a = 7.375 (1) Åθ = 2.2–21.4°
b = 10.770 (2) ŵ = 0.10 mm1
c = 16.906 (2) ÅT = 298 K
V = 1342.8 (3) Å3Block-like, pale-yellow
Z = 40.50 × 0.35 × 0.10 mm
Bruker SMART1000 CCD area-detector diffractometer1700 independent reflections
Radiation source: fine-focus sealed tube899 reflections with I > 2σ(I)
graphiteRint = 0.068
phi and ω scansθmax = 27.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.952, Tmax = 0.990k = −13→13
7656 measured reflectionsl = −14→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0438P)2 + 0.0834P] where P = (Fo2 + 2Fc2)/3
1700 reflections(Δ/σ)max < 0.001
195 parametersΔρmax = 0.20 e Å3
2 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.7084 (5)0.5375 (3)0.90756 (16)0.0478 (9)
N20.6140 (4)0.6960 (3)0.54920 (16)0.0389 (8)
N30.6281 (5)0.8627 (4)0.1831 (2)0.0601 (11)
O10.7150 (4)0.5267 (3)0.99032 (15)0.0636 (10)
H10.784 (6)0.454 (4)0.999 (3)0.100 (18)*
O20.6733 (5)0.9635 (3)0.15589 (17)0.0830 (11)
O30.5894 (6)0.7723 (3)0.14311 (17)0.0939 (13)
C10.5534 (7)0.7318 (4)0.9402 (2)0.0755 (15)
H1A0.58210.70900.99360.113*
H1B0.42410.73520.93390.113*
H1C0.60460.81170.92860.113*
C20.6304 (5)0.6371 (3)0.8846 (2)0.0384 (9)
C30.6214 (5)0.6542 (3)0.79802 (19)0.0319 (9)
C40.5531 (5)0.7611 (3)0.76460 (19)0.0394 (10)
H40.50840.82350.79720.047*
C50.5498 (5)0.7776 (3)0.6832 (2)0.0391 (10)
H50.50410.85100.66210.047*
C60.6133 (5)0.6869 (3)0.63323 (19)0.0328 (9)
C70.6787 (5)0.5777 (3)0.6663 (2)0.0381 (10)
H70.72010.51450.63340.046*
C80.6832 (5)0.5618 (3)0.7469 (2)0.0377 (9)
H80.72830.48800.76770.045*
C90.6249 (5)0.8019 (3)0.5170 (2)0.0402 (10)
H90.63640.87190.54890.048*
C100.6198 (5)0.8171 (3)0.43071 (19)0.0375 (10)
C110.6747 (5)0.9298 (3)0.3977 (2)0.0454 (11)
H110.70980.99480.43050.055*
C120.6773 (5)0.9453 (4)0.3167 (2)0.0466 (11)
H120.71561.01980.29440.056*
C130.6223 (5)0.8484 (4)0.2699 (2)0.0407 (10)
C140.5622 (5)0.7378 (3)0.3007 (2)0.0436 (11)
H140.52230.67430.26780.052*
C150.5627 (5)0.7232 (3)0.3816 (2)0.0405 (10)
H150.52370.64850.40340.049*
U11U22U33U12U13U23
N10.069 (3)0.0466 (19)0.0279 (16)0.0068 (19)−0.0017 (17)0.0065 (15)
N20.043 (2)0.0377 (17)0.0363 (18)0.0016 (17)0.0005 (16)0.0021 (14)
N30.060 (3)0.080 (3)0.040 (2)0.017 (3)0.003 (2)0.013 (2)
O10.097 (3)0.0590 (19)0.0348 (15)0.014 (2)−0.0051 (16)0.0064 (14)
O20.100 (3)0.094 (2)0.0551 (19)0.010 (2)0.0065 (19)0.0338 (19)
O30.139 (4)0.100 (3)0.0422 (19)0.005 (3)−0.002 (2)−0.0081 (19)
C10.111 (4)0.072 (3)0.044 (2)0.031 (3)−0.003 (3)−0.011 (2)
C20.043 (3)0.034 (2)0.038 (2)−0.007 (2)0.0012 (18)−0.0009 (17)
C30.030 (2)0.034 (2)0.032 (2)−0.0030 (19)−0.0013 (17)0.0024 (16)
C40.042 (3)0.038 (2)0.038 (2)0.002 (2)0.0005 (18)−0.0033 (18)
C50.042 (3)0.033 (2)0.043 (2)0.0047 (19)−0.0014 (18)0.0071 (17)
C60.034 (2)0.037 (2)0.027 (2)−0.0009 (19)0.0004 (17)0.0015 (15)
C70.042 (3)0.035 (2)0.037 (2)−0.001 (2)0.0061 (19)−0.0006 (17)
C80.043 (3)0.0325 (19)0.037 (2)0.002 (2)−0.0015 (18)0.0024 (17)
C90.044 (3)0.041 (2)0.035 (2)0.000 (2)−0.0051 (19)−0.0031 (17)
C100.038 (3)0.039 (2)0.035 (2)0.0029 (19)0.0034 (19)−0.0022 (17)
C110.045 (3)0.042 (2)0.049 (2)0.002 (2)−0.005 (2)0.0022 (18)
C120.048 (3)0.042 (2)0.050 (3)0.004 (2)0.000 (2)0.0166 (19)
C130.039 (3)0.051 (2)0.032 (2)0.013 (2)0.0026 (18)0.0079 (18)
C140.043 (3)0.044 (2)0.044 (2)0.008 (2)−0.0051 (18)−0.0009 (19)
C150.039 (3)0.042 (2)0.041 (2)0.003 (2)0.0038 (18)0.0064 (18)
N1—C21.278 (4)C5—H50.9300
N1—O11.405 (4)C6—C71.388 (4)
N2—C91.266 (4)C7—C81.375 (5)
N2—C61.424 (4)C7—H70.9300
N3—O31.219 (4)C8—H80.9300
N3—O21.225 (4)C9—C101.469 (5)
N3—C131.476 (5)C9—H90.9300
O1—H10.95 (4)C10—C151.375 (5)
C1—C21.498 (5)C10—C111.396 (5)
C1—H1A0.9600C11—C121.378 (5)
C1—H1B0.9600C11—H110.9300
C1—H1C0.9600C12—C131.371 (5)
C2—C31.477 (4)C12—H120.9300
C3—C41.378 (4)C13—C141.374 (5)
C3—C81.395 (4)C14—C151.376 (4)
C4—C51.388 (4)C14—H140.9300
C4—H40.9300C15—H150.9300
C5—C61.374 (5)
C2—N1—O1112.8 (3)C8—C7—C6120.9 (3)
C9—N2—C6119.4 (3)C8—C7—H7119.6
O3—N3—O2124.2 (4)C6—C7—H7119.6
O3—N3—C13117.5 (4)C7—C8—C3121.1 (3)
O2—N3—C13118.3 (4)C7—C8—H8119.4
N1—O1—H1104 (3)C3—C8—H8119.4
C2—C1—H1A109.5N2—C9—C10121.7 (3)
C2—C1—H1B109.5N2—C9—H9119.1
H1A—C1—H1B109.5C10—C9—H9119.1
C2—C1—H1C109.5C15—C10—C11119.1 (3)
H1A—C1—H1C109.5C15—C10—C9121.7 (3)
H1B—C1—H1C109.5C11—C10—C9119.2 (3)
N1—C2—C3115.2 (3)C12—C11—C10120.4 (4)
N1—C2—C1123.5 (3)C12—C11—H11119.8
C3—C2—C1121.3 (3)C10—C11—H11119.8
C4—C3—C8117.5 (3)C13—C12—C11118.5 (4)
C4—C3—C2121.8 (3)C13—C12—H12120.8
C8—C3—C2120.7 (3)C11—C12—H12120.8
C3—C4—C5121.3 (3)C12—C13—C14122.4 (3)
C3—C4—H4119.3C12—C13—N3119.1 (4)
C5—C4—H4119.3C14—C13—N3118.5 (4)
C6—C5—C4120.8 (3)C13—C14—C15118.4 (4)
C6—C5—H5119.6C13—C14—H14120.8
C4—C5—H5119.6C15—C14—H14120.8
C5—C6—C7118.3 (3)C10—C15—C14121.1 (4)
C5—C6—N2124.4 (3)C10—C15—H15119.5
C7—C6—N2117.3 (3)C14—C15—H15119.5
O1—N1—C2—C3179.3 (3)C6—N2—C9—C10−177.8 (3)
O1—N1—C2—C1−0.3 (6)N2—C9—C10—C1515.0 (6)
N1—C2—C3—C4−175.2 (3)N2—C9—C10—C11−164.9 (4)
C1—C2—C3—C44.4 (6)C15—C10—C11—C12−2.1 (6)
N1—C2—C3—C84.4 (5)C9—C10—C11—C12177.8 (3)
C1—C2—C3—C8−175.9 (4)C10—C11—C12—C131.0 (6)
C8—C3—C4—C5−1.5 (5)C11—C12—C13—C141.0 (6)
C2—C3—C4—C5178.2 (4)C11—C12—C13—N3−178.7 (4)
C3—C4—C5—C60.6 (6)O3—N3—C13—C12175.4 (4)
C4—C5—C6—C70.8 (6)O2—N3—C13—C12−3.7 (6)
C4—C5—C6—N2179.7 (3)O3—N3—C13—C14−4.3 (6)
C9—N2—C6—C528.3 (6)O2—N3—C13—C14176.5 (4)
C9—N2—C6—C7−152.8 (4)C12—C13—C14—C15−1.9 (6)
C5—C6—C7—C8−1.3 (6)N3—C13—C14—C15177.8 (4)
N2—C6—C7—C8179.8 (3)C11—C10—C15—C141.3 (6)
C6—C7—C8—C30.4 (6)C9—C10—C15—C14−178.6 (3)
C4—C3—C8—C71.0 (6)C13—C14—C15—C100.7 (6)
C2—C3—C8—C7−178.7 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···N2i0.95 (4)1.97 (4)2.887 (4)162 (4)
C1—H1A···O3ii0.962.623.469 (5)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N2i0.95 (4)1.97 (4)2.887 (4)162 (4)
C1—H1A⋯O3ii0.962.623.469 (5)148

Symmetry codes: (i) ; (ii) .

  6 in total

1.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.

Authors:  R H Lozier; R A Bogomolni; W Stoeckenius
Journal:  Biophys J       Date:  1975-09       Impact factor: 4.033

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  pi-Stacked hydrogen-bonded sheets in N,N'-bis(4-nitrobenzylidene)ethane-1,2-diamine and pi-stacked hydrogen-bonded chains in N,N'-bis(4-nitrobenzylidene)propane-1,3-diamine.

Authors:  Joao A S Bomfim; James L Wardell; John N Low; Janet M S Skakle; Christopher Glidewell
Journal:  Acta Crystallogr C       Date:  2004-12-18       Impact factor: 1.172

4.  4,4'-[2,2-Dimethyl-propane-1,3-diyl-bis(nitrilo-methyl-idyne)]dibenzonitrile.

Authors:  Hoong-Kun Fun; Hadi Kargar; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-19

5.  (E)-1-(4-Amino-phen-yl)ethanone oxime.

Authors:  Muhammad Rafiq; Muhammad Hanif; Ghulam Qadeer; Sauli Vuoti; Juho Autio
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-22

6.  6,6'-Dihydr-oxy-2,2'-[(butane-1,4-diyldi-oxy)bis-(nitrilo-methyl-idyne)]diphenol.

Authors:  Wen-Kui Dong; Xue-Ni He; Yin-Xia Sun; Li Xu; Yong-Hong Guan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13
  6 in total
  8 in total

1.  1-(4-{[(E)-5-Chloro-2-hy-droxy-benzyl-idene]amino}-phen-yl)ethanone oxime.

Authors:  Li Zhao; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-04

2.  Bis[(E)-4-bromo-2-(ethoxy-imino-meth-yl)phenolato-κN,O]copper(II).

Authors:  Shang-Sheng Gong; Wen-Kui Dong; Jun-Feng Tong; Li Li; Jian-Chao Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-31

3.  Bis[(E)-4-bromo-2-(methoxy-imino-meth-yl)phenolato-κN,O]copper(II).

Authors:  Lan-Qin Chai; Jian Yao; Shang-Sheng Gong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-18

4.  (E)-2-{4-[1-(Hydroxyimino)ethyl]phenyl-iminomethyl}-6-methoxyphenol mono-hydrate.

Authors:  Jun-Feng Tong; Su-Xia Gao; Wen-Kui Dong; Hong-Fu Li; Jian-Chao Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-17

5.  4-Chloro-2-((E)-{3-[1-(hydroxy-imino)eth-yl]phen-yl}imino-meth-yl)phenol.

Authors:  Li Xu; Lei Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-07

6.  4-({4-[1-(Methoxy-imino)eth-yl]anilino}(phen-yl)methyl-ene)-3-methyl-2-phenyl-1H-pyrazol-5(4H)-one.

Authors:  Jian Yao; Su-Xia Gao; Wen-Kui Dong; Jun-Feng Tong; Shang-Sheng Gong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-21

7.  4-Bromo-2-({4-[(hy-droxy-imino)-meth-yl]phen-yl}imino-meth-yl)phenol.

Authors:  Yu-Hua Yang; Jian-Chao Wu; Shang-Sheng Gong; Jiu-Si Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-14

8.  Bis{(E)-2-[1-(eth-oxy-imino)-eth-yl]-1-naphtho-lato-κN,O}copper(II).

Authors:  Wen-Kui Dong; Xiu-Yan Dong; Yin-Xia Sun; Jian-Chao Wu; Si-Jia Xing
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-24
  8 in total

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