Literature DB >> 21577887

Menthyl 2-oxo-2H-chromene-3-carboxyl-ate.

Cui-Lian Xu, Shan-Yu Liu, Gang Chen, Guo-Yu Yang, Ming-Qin Zhao.   

Abstract

The title compound, C(20)H(24)O(4), was synthesized from the reaction of 2-oxo-2H-chromene-3-acyl chloride and menthol. The mean plane of the ester group and that of the four essentially planar (maximum deviation 0.0112 Å) C atoms of the chair-form cyclo-hexyl ring form dihedral angles of 43.8 (3) ° and 81.8 (1)°, respectively, with the mean plane of the coumarin ring system. In the crystal structure, weak inter-molecular C-H⋯O hydrogen bonds connect the mol-ecules into a two-dimensional network.

Entities:  

Year:  2009        PMID: 21577887      PMCID: PMC2970470          DOI: 10.1107/S1600536809035995

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of coumarin compounds, see: Yu et al. (2003 ▶, 2007 ▶).

Experimental

Crystal data

C20H24O4 M = 328.39 Orthorhombic, a = 11.080 (2) Å b = 12.408 (3) Å c = 13.532 (3) Å V = 1860.3 (6) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 291 K 0.18 × 0.18 × 0.17 mm

Data collection

Rigaku R-AXIS-IV diffractometer Absorption correction: multi-scan (ABSCOR; Higashi,1995 ▶) T min = 0.986, T max = 0.986 5812 measured reflections 1943 independent reflections 1654 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.138 S = 1.09 1943 reflections 218 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.17 e Å−3 Data collection: R-AXIS (Rigaku, 1997 ▶); cell refinement: R-AXIS data reduction: R-AXIS; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: TEXSAN (Molecular Structure Corporation & Rigaku (2000 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: TEXSAN. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809035995/lh2883sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809035995/lh2883Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H24O4F(000) = 704
Mr = 328.39Dx = 1.173 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 489 reflections
a = 11.080 (2) Åθ = 2.2–25.5°
b = 12.408 (3) ŵ = 0.08 mm1
c = 13.532 (3) ÅT = 291 K
V = 1860.3 (6) Å3Prism, colorless
Z = 40.18 × 0.18 × 0.17 mm
Rigaku R-AXIS-IV diffractometer1943 independent reflections
Radiation source: fine-focus sealed tube1654 reflections with I > 2σ(I)
graphiteRint = 0.063
Detector resolution: 0 pixels mm-1θmax = 25.5°, θmin = 2.2°
Oscillation frames scansh = −13→13
Absorption correction: multi-scan (ABSCOR; Higashi,1995)k = 0→15
Tmin = 0.986, Tmax = 0.986l = −16→16
5812 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057H-atom parameters constrained
wR(F2) = 0.138w = 1/[σ2(Fo2) + (0.0742P)2 + 0.172P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
1943 reflectionsΔρmax = 0.15 e Å3
218 parametersΔρmin = −0.17 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.025 (5)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.1789 (2)1.01848 (18)0.10921 (18)0.0682 (7)
O21.0992 (3)1.1284 (2)0.2180 (2)0.0863 (8)
O30.9734 (2)1.0101 (2)0.37733 (18)0.0852 (8)
O40.83141 (18)0.92908 (18)0.28562 (15)0.0591 (6)
C11.1825 (3)0.9219 (3)0.0601 (2)0.0593 (8)
C21.2617 (3)0.9135 (3)−0.0176 (3)0.0814 (11)
H2A1.31240.9706−0.03370.098*
C31.2651 (4)0.8204 (4)−0.0710 (3)0.0929 (13)
H3A1.31790.8145−0.12420.111*
C41.1909 (5)0.7341 (4)−0.0468 (3)0.0931 (14)
H4A1.19470.6707−0.08330.112*
C51.1114 (4)0.7426 (3)0.0315 (3)0.0760 (10)
H5A1.06180.68490.04780.091*
C61.1055 (3)0.8379 (2)0.0861 (2)0.0545 (7)
C71.0247 (3)0.8555 (2)0.1674 (2)0.0547 (7)
H7A0.97380.80000.18730.066*
C81.0208 (3)0.9499 (2)0.2151 (2)0.0508 (7)
C91.0994 (3)1.0387 (3)0.1849 (2)0.0611 (8)
C100.9412 (3)0.9684 (3)0.3017 (2)0.0571 (8)
C110.7426 (3)0.9362 (2)0.3663 (2)0.0565 (8)
H11A0.75451.00390.40220.068*
C120.6189 (3)0.9375 (3)0.3173 (2)0.0656 (9)
H12A0.61230.87080.27890.079*
C130.5222 (3)0.9316 (3)0.3989 (3)0.0834 (11)
H13A0.52420.99760.43730.100*
H13B0.44310.92610.36850.100*
C140.5413 (4)0.8365 (3)0.4669 (3)0.0853 (12)
H14A0.47940.83690.51750.102*
H14B0.53270.77040.42930.102*
C150.6634 (4)0.8376 (3)0.5156 (3)0.0755 (10)
H15A0.66900.90330.55550.091*
C160.7619 (3)0.8429 (3)0.4359 (3)0.0668 (9)
H16A0.84010.85020.46750.080*
H16B0.76200.77610.39860.080*
C170.5998 (4)1.0313 (4)0.2444 (3)0.0888 (12)
H17A0.66841.03050.19870.107*
C180.4854 (5)1.0146 (6)0.1819 (4)0.142 (2)
H18A0.48820.94500.15110.213*
H18B0.48111.06940.13200.213*
H18C0.41561.01900.22370.213*
C190.5982 (5)1.1416 (4)0.2928 (4)0.1272 (19)
H19A0.58621.19590.24320.191*
H19B0.67371.15390.32570.191*
H19C0.53361.14470.34000.191*
C200.6831 (6)0.7415 (4)0.5839 (4)0.1226 (19)
H20A0.62090.74010.63320.184*
H20B0.76040.74790.61540.184*
H20C0.68050.67610.54610.184*
U11U22U33U12U13U23
O10.0560 (13)0.0657 (14)0.0828 (15)−0.0095 (11)0.0147 (13)0.0056 (12)
O20.103 (2)0.0614 (14)0.0946 (18)−0.0128 (13)0.0082 (17)−0.0075 (14)
O30.0623 (15)0.122 (2)0.0708 (15)−0.0146 (15)0.0000 (13)−0.0310 (15)
O40.0420 (11)0.0798 (14)0.0556 (12)−0.0051 (10)0.0088 (10)−0.0100 (11)
C10.0418 (16)0.073 (2)0.0635 (19)0.0067 (15)0.0045 (15)0.0122 (17)
C20.060 (2)0.097 (3)0.087 (3)0.012 (2)0.026 (2)0.012 (2)
C30.070 (2)0.125 (3)0.084 (3)0.028 (3)0.032 (2)0.011 (3)
C40.095 (3)0.103 (3)0.081 (3)0.029 (3)0.011 (3)−0.019 (2)
C50.083 (3)0.070 (2)0.075 (2)0.008 (2)0.010 (2)−0.0050 (19)
C60.0466 (16)0.0606 (17)0.0564 (17)0.0036 (14)0.0032 (15)0.0057 (15)
C70.0450 (16)0.0618 (17)0.0572 (16)−0.0066 (14)−0.0003 (15)0.0057 (14)
C80.0407 (15)0.0583 (17)0.0533 (15)−0.0003 (13)−0.0028 (14)0.0008 (14)
C90.0510 (18)0.064 (2)0.069 (2)−0.0023 (15)−0.0058 (16)0.0037 (17)
C100.0445 (17)0.0688 (19)0.0579 (18)0.0017 (15)−0.0032 (15)−0.0072 (16)
C110.0494 (17)0.0660 (18)0.0541 (17)0.0028 (14)0.0092 (15)−0.0053 (15)
C120.0461 (17)0.083 (2)0.068 (2)0.0034 (17)0.0045 (16)−0.0060 (18)
C130.0520 (19)0.105 (3)0.093 (3)0.001 (2)0.016 (2)−0.008 (2)
C140.075 (3)0.095 (3)0.086 (3)−0.019 (2)0.036 (2)−0.015 (2)
C150.082 (3)0.079 (2)0.066 (2)−0.004 (2)0.020 (2)−0.0009 (19)
C160.063 (2)0.074 (2)0.0637 (19)0.0068 (17)0.0091 (17)0.0003 (18)
C170.062 (2)0.113 (3)0.091 (3)0.016 (2)−0.002 (2)0.019 (2)
C180.107 (4)0.188 (6)0.130 (4)0.018 (4)−0.044 (4)0.027 (4)
C190.134 (4)0.099 (3)0.149 (4)0.025 (3)−0.001 (4)0.023 (4)
C200.148 (5)0.121 (4)0.099 (3)0.001 (4)0.038 (4)0.033 (3)
O1—C11.370 (4)C12—C131.540 (5)
O1—C91.374 (4)C12—H12A0.9800
O2—C91.199 (4)C13—C141.512 (6)
O3—C101.201 (4)C13—H13A0.9700
O4—C101.328 (4)C13—H13B0.9700
O4—C111.472 (4)C14—C151.504 (6)
C1—C21.374 (5)C14—H14A0.9700
C1—C61.392 (4)C14—H14B0.9700
C2—C31.363 (6)C15—C201.525 (6)
C2—H2A0.9300C15—C161.535 (5)
C3—C41.389 (6)C15—H15A0.9800
C3—H3A0.9300C16—H16A0.9700
C4—C51.382 (5)C16—H16B0.9700
C4—H4A0.9300C17—C191.517 (7)
C5—C61.396 (5)C17—C181.537 (7)
C5—H5A0.9300C17—H17A0.9800
C6—C71.434 (4)C18—H18A0.9600
C7—C81.338 (4)C18—H18B0.9600
C7—H7A0.9300C18—H18C0.9600
C8—C91.463 (4)C19—H19A0.9600
C8—C101.485 (4)C19—H19B0.9600
C11—C161.508 (5)C19—H19C0.9600
C11—C121.522 (4)C20—H20A0.9600
C11—H11A0.9800C20—H20B0.9600
C12—C171.539 (5)C20—H20C0.9600
C1—O1—C9122.7 (2)C12—C13—H13A109.2
C10—O4—C11117.9 (2)C14—C13—H13B109.2
O1—C1—C2117.1 (3)C12—C13—H13B109.2
O1—C1—C6120.9 (3)H13A—C13—H13B107.9
C2—C1—C6121.9 (3)C15—C14—C13112.6 (3)
C3—C2—C1119.2 (4)C15—C14—H14A109.1
C3—C2—H2A120.4C13—C14—H14A109.1
C1—C2—H2A120.4C15—C14—H14B109.1
C2—C3—C4120.8 (4)C13—C14—H14B109.1
C2—C3—H3A119.6H14A—C14—H14B107.8
C4—C3—H3A119.6C14—C15—C20112.8 (4)
C5—C4—C3119.9 (4)C14—C15—C16109.4 (3)
C5—C4—H4A120.1C20—C15—C16110.9 (4)
C3—C4—H4A120.1C14—C15—H15A107.9
C4—C5—C6120.1 (4)C20—C15—H15A107.9
C4—C5—H5A120.0C16—C15—H15A107.9
C6—C5—H5A120.0C11—C16—C15111.7 (3)
C1—C6—C5118.1 (3)C11—C16—H16A109.3
C1—C6—C7117.6 (3)C15—C16—H16A109.3
C5—C6—C7124.3 (3)C11—C16—H16B109.3
C8—C7—C6121.5 (3)C15—C16—H16B109.3
C8—C7—H7A119.2H16A—C16—H16B107.9
C6—C7—H7A119.2C19—C17—C18110.4 (4)
C7—C8—C9120.4 (3)C19—C17—C12114.0 (4)
C7—C8—C10122.4 (3)C18—C17—C12111.3 (4)
C9—C8—C10117.2 (3)C19—C17—H17A106.9
O2—C9—O1116.6 (3)C18—C17—H17A106.9
O2—C9—C8126.4 (3)C12—C17—H17A106.9
O1—C9—C8116.9 (3)C17—C18—H18A109.5
O3—C10—O4124.8 (3)C17—C18—H18B109.5
O3—C10—C8124.3 (3)H18A—C18—H18B109.5
O4—C10—C8110.9 (3)C17—C18—H18C109.5
O4—C11—C16108.8 (2)H18A—C18—H18C109.5
O4—C11—C12106.2 (2)H18B—C18—H18C109.5
C16—C11—C12114.1 (3)C17—C19—H19A109.5
O4—C11—H11A109.2C17—C19—H19B109.5
C16—C11—H11A109.2H19A—C19—H19B109.5
C12—C11—H11A109.2C17—C19—H19C109.5
C11—C12—C17114.3 (3)H19A—C19—H19C109.5
C11—C12—C13108.3 (3)H19B—C19—H19C109.5
C17—C12—C13113.6 (3)C15—C20—H20A109.5
C11—C12—H12A106.7C15—C20—H20B109.5
C17—C12—H12A106.7H20A—C20—H20B109.5
C13—C12—H12A106.7C15—C20—H20C109.5
C14—C13—C12112.1 (3)H20A—C20—H20C109.5
C14—C13—H13A109.2H20B—C20—H20C109.5
C9—O1—C1—C2176.7 (3)C11—O4—C10—C8177.2 (2)
C9—O1—C1—C6−1.0 (4)C7—C8—C10—O3133.2 (4)
O1—C1—C2—C3−177.6 (3)C9—C8—C10—O3−44.8 (5)
C6—C1—C2—C30.1 (5)C7—C8—C10—O4−44.5 (4)
C1—C2—C3—C4−0.8 (6)C9—C8—C10—O4137.5 (3)
C2—C3—C4—C50.7 (7)C10—O4—C11—C16−83.0 (3)
C3—C4—C5—C60.1 (6)C10—O4—C11—C12153.7 (3)
O1—C1—C6—C5178.3 (3)O4—C11—C12—C17−58.8 (4)
C2—C1—C6—C50.7 (5)C16—C11—C12—C17−178.7 (3)
O1—C1—C6—C7−1.3 (4)O4—C11—C12—C13173.5 (3)
C2—C1—C6—C7−178.9 (3)C16—C11—C12—C1353.6 (4)
C4—C5—C6—C1−0.8 (5)C11—C12—C13—C14−53.9 (4)
C4—C5—C6—C7178.8 (3)C17—C12—C13—C14178.0 (3)
C1—C6—C7—C81.6 (4)C12—C13—C14—C1557.7 (4)
C5—C6—C7—C8−178.0 (3)C13—C14—C15—C20−179.8 (3)
C6—C7—C8—C90.3 (4)C13—C14—C15—C16−55.8 (4)
C6—C7—C8—C10−177.6 (3)O4—C11—C16—C15−173.5 (3)
C1—O1—C9—O2−175.3 (3)C12—C11—C16—C15−55.1 (4)
C1—O1—C9—C82.9 (4)C14—C15—C16—C1153.8 (4)
C7—C8—C9—O2175.4 (3)C20—C15—C16—C11178.8 (4)
C10—C8—C9—O2−6.6 (5)C11—C12—C17—C19−66.3 (5)
C7—C8—C9—O1−2.5 (4)C13—C12—C17—C1958.5 (5)
C10—C8—C9—O1175.5 (2)C11—C12—C17—C18167.9 (4)
C11—O4—C10—O3−0.5 (5)C13—C12—C17—C18−67.2 (5)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O2i0.932.433.288 (5)154
C5—H5A···O3ii0.932.423.276 (5)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3A⋯O2i0.932.433.288 (5)154
C5—H5A⋯O3ii0.932.423.276 (5)152

Symmetry codes: (i) ; (ii) .

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Review 2.  New developments in natural products-based anti-AIDS research.

Authors:  Donglei Yu; Susan L Morris-Natschke; Kuo-Hsiung Lee
Journal:  Med Res Rev       Date:  2007-01       Impact factor: 12.944

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
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1.  Cinnamyl 2-oxo-2H-chromene-3-carboxyl-ate.

Authors:  Cui-Lian Xu; Nan Yang; Guo-Yu Yang; Su-Fang Fan; Cao-Yuan Niu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-04
  1 in total

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