Literature DB >> 21577856

(E)-N'-(3,4-Dimethoxy-benzyl-idene)-2,4-dihydroxy-benzohydrazide methanol solvate.

Qiao-Ling Zhang1, Li-Zi Yin, Xu-Ming Deng, Song-Cai Liu, De-Guang Song.   

Abstract

The title compound, C(16)H(16)N(2)O(5)·CH(3)OH, was obtained from a condensation reaction of 3,4-dimethoxy-benzaldehyde and 2,4-dihydroxy-benzohydrazide. The non-H atoms of the Schiff base mol-ecule are approximately coplanar (r.m.s. deviation = 0.043 Å) and the dihedral angle between the two benzene rings is 1.6 (1)°. The mol-ecule adopts an E configuration with respect to the C=N double bond. An intra-molecular O-H⋯O hydrogen bond is observed. The Schiff base and methanol mol-ecules are linked into a two-dimensional network parallel to (10) by inter-molecular N-H⋯O, O-H⋯N and O-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21577856      PMCID: PMC2970482          DOI: 10.1107/S1600536809035752

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff base compounds, hydrazone compounds and their biological properties, see: Kucukguzel et al. (2006 ▶); Khattab et al. (2005 ▶); Karthikeyan et al. (2006 ▶); Okabe et al. (1993 ▶). For bond-length data, see: Allen et al. (1987 ▶). For related structures, see: Shan et al. (2008 ▶); Fun et al. (2008 ▶); Ma et al. (2008 ▶); Diao et al. (2008a ▶,b ▶); Ejsmont et al. (2008 ▶).

Experimental

Crystal data

C16H16N2O5·CH4O M = 348.35 Monoclinic, a = 8.497 (1) Å b = 17.431 (2) Å c = 11.933 (2) Å β = 102.93 (2)° V = 1722.6 (4) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.25 × 0.23 × 0.23 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.975, T max = 0.977 10465 measured reflections 3732 independent reflections 2017 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.129 S = 1.03 3732 reflections 235 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809035752/ci2900sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809035752/ci2900Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16N2O5·CH4OF(000) = 736
Mr = 348.35Dx = 1.343 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1327 reflections
a = 8.497 (1) Åθ = 2.3–24.5°
b = 17.431 (2) ŵ = 0.10 mm1
c = 11.933 (2) ÅT = 298 K
β = 102.93 (2)°Block, colourless
V = 1722.6 (4) Å30.25 × 0.23 × 0.23 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3732 independent reflections
Radiation source: fine-focus sealed tube2017 reflections with I > 2σ(I)
graphiteRint = 0.043
ω scansθmax = 27.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −10→10
Tmin = 0.975, Tmax = 0.977k = −20→22
10465 measured reflectionsl = −15→7
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.129H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0522P)2 + 0.0211P] where P = (Fo2 + 2Fc2)/3
3732 reflections(Δ/σ)max = 0.001
235 parametersΔρmax = 0.15 e Å3
1 restraintΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.9655 (2)0.08862 (10)0.61461 (15)0.0408 (4)
N20.8536 (2)0.03538 (10)0.56016 (14)0.0414 (4)
O11.2219 (2)0.05972 (9)0.95309 (12)0.0623 (5)
H11.15610.03160.91180.093*
O21.52034 (18)0.28449 (9)0.94432 (11)0.0499 (4)
H21.54420.31490.89840.075*
O31.01873 (19)0.01674 (9)0.77490 (12)0.0544 (4)
O40.42243 (18)−0.17176 (9)0.40757 (13)0.0562 (4)
O50.29676 (18)−0.13286 (8)0.19882 (13)0.0582 (5)
O60.6296 (2)0.37824 (9)0.81028 (13)0.0639 (5)
H60.59490.42220.80070.096*
C11.1618 (2)0.13446 (11)0.77945 (16)0.0379 (5)
C21.2479 (3)0.12222 (12)0.89285 (17)0.0419 (5)
C31.3640 (3)0.17364 (13)0.94638 (17)0.0445 (5)
H31.41780.16551.02230.053*
C41.4008 (2)0.23680 (12)0.88820 (17)0.0393 (5)
C51.3173 (3)0.25089 (12)0.77654 (17)0.0461 (6)
H51.34010.29420.73750.055*
C61.2005 (2)0.20011 (12)0.72414 (17)0.0442 (6)
H6A1.14500.20980.64900.053*
C71.0444 (2)0.07663 (12)0.72359 (17)0.0401 (5)
C80.7848 (2)0.05124 (12)0.45725 (18)0.0412 (5)
H80.81520.09560.42420.049*
C90.6598 (2)0.00287 (11)0.38858 (17)0.0373 (5)
C100.6063 (2)−0.06345 (11)0.43485 (17)0.0408 (5)
H100.6532−0.07810.50980.049*
C110.4845 (2)−0.10693 (11)0.36970 (18)0.0414 (5)
C120.4150 (2)−0.08531 (12)0.25628 (18)0.0434 (5)
C130.4679 (3)−0.02028 (12)0.21043 (18)0.0479 (6)
H130.4218−0.00570.13530.057*
C140.5908 (3)0.02357 (12)0.27733 (17)0.0443 (5)
H140.62670.06740.24630.053*
C150.4975 (3)−0.19856 (14)0.5184 (2)0.0648 (7)
H15A0.6088−0.21000.52090.097*
H15B0.4437−0.24410.53530.097*
H15C0.4912−0.15970.57430.097*
C160.2220 (3)−0.11211 (15)0.0836 (2)0.0661 (7)
H16A0.1795−0.06100.08260.099*
H16B0.1358−0.14730.05390.099*
H16C0.3004−0.11410.03690.099*
C170.6766 (4)0.35311 (16)0.7103 (2)0.0814 (9)
H17A0.78120.37360.70930.122*
H17B0.59950.37050.64360.122*
H17C0.68120.29810.70990.122*
H1A0.979 (2)0.1297 (8)0.5719 (15)0.050*
U11U22U33U12U13U23
N10.0420 (10)0.0382 (11)0.0393 (11)−0.0067 (9)0.0028 (8)−0.0003 (8)
N20.0418 (10)0.0372 (11)0.0433 (11)−0.0048 (8)0.0056 (8)−0.0044 (8)
O10.0787 (13)0.0582 (11)0.0429 (10)−0.0152 (9)−0.0014 (8)0.0154 (8)
O20.0562 (10)0.0511 (10)0.0370 (9)−0.0089 (8)−0.0011 (7)−0.0071 (7)
O30.0647 (11)0.0474 (10)0.0475 (10)−0.0106 (8)0.0049 (8)0.0089 (7)
O40.0589 (10)0.0405 (9)0.0654 (11)−0.0096 (8)0.0057 (8)0.0064 (8)
O50.0585 (10)0.0475 (10)0.0598 (11)−0.0110 (8)−0.0056 (8)−0.0038 (8)
O60.0943 (14)0.0413 (10)0.0577 (11)−0.0014 (10)0.0201 (9)−0.0022 (8)
C10.0427 (12)0.0373 (12)0.0311 (12)0.0030 (10)0.0031 (9)0.0000 (9)
C20.0522 (13)0.0417 (13)0.0321 (12)0.0043 (11)0.0099 (10)0.0038 (10)
C30.0528 (13)0.0486 (14)0.0286 (12)0.0043 (11)0.0012 (10)−0.0003 (10)
C40.0408 (12)0.0401 (13)0.0340 (12)0.0023 (10)0.0023 (9)−0.0099 (10)
C50.0559 (14)0.0419 (14)0.0354 (13)−0.0025 (11)−0.0005 (10)0.0033 (10)
C60.0521 (13)0.0445 (14)0.0297 (12)−0.0002 (11)−0.0043 (10)0.0016 (10)
C70.0419 (12)0.0399 (13)0.0367 (13)0.0026 (10)0.0048 (10)0.0000 (10)
C80.0415 (12)0.0352 (12)0.0453 (14)−0.0023 (10)0.0063 (10)−0.0015 (10)
C90.0368 (12)0.0316 (12)0.0419 (13)−0.0005 (9)0.0053 (9)−0.0040 (9)
C100.0418 (12)0.0368 (13)0.0416 (13)0.0029 (10)0.0047 (10)−0.0026 (10)
C110.0424 (12)0.0294 (12)0.0530 (14)0.0006 (10)0.0116 (10)−0.0015 (10)
C120.0414 (12)0.0339 (12)0.0513 (15)−0.0027 (10)0.0026 (10)−0.0103 (10)
C130.0506 (14)0.0445 (14)0.0446 (14)−0.0028 (11)0.0022 (11)−0.0019 (11)
C140.0482 (13)0.0377 (13)0.0449 (14)−0.0052 (10)0.0059 (10)0.0011 (10)
C150.0699 (17)0.0456 (15)0.0781 (19)−0.0015 (13)0.0147 (14)0.0184 (13)
C160.0569 (15)0.0674 (18)0.0628 (18)−0.0137 (14)−0.0104 (12)−0.0078 (13)
C170.114 (3)0.072 (2)0.0633 (19)−0.0190 (18)0.0304 (17)−0.0166 (15)
N1—C71.339 (3)C5—H50.93
N1—N21.382 (2)C6—H6A0.93
N1—H1A0.901 (9)C8—C91.456 (3)
N2—C81.267 (2)C8—H80.93
O1—C21.350 (2)C9—C141.374 (3)
O1—H10.82C9—C101.400 (3)
O2—C41.367 (2)C10—C111.375 (3)
O2—H20.82C10—H100.93
O3—C71.254 (2)C11—C121.402 (3)
O4—C111.366 (2)C12—C131.377 (3)
O4—C151.413 (3)C13—C141.393 (3)
O5—C121.363 (2)C13—H130.93
O5—C161.426 (3)C14—H140.93
O6—C171.410 (3)C15—H15A0.96
O6—H60.82C15—H15B0.96
C1—C61.397 (3)C15—H15C0.96
C1—C21.403 (3)C16—H16A0.96
C1—C71.469 (3)C16—H16B0.96
C2—C31.380 (3)C16—H16C0.96
C3—C41.374 (3)C17—H17A0.96
C3—H30.93C17—H17B0.96
C4—C51.384 (3)C17—H17C0.96
C5—C61.372 (3)
C7—N1—N2119.58 (17)C10—C9—C8121.09 (19)
C7—N1—H1A125.0 (14)C11—C10—C9120.1 (2)
N2—N1—H1A115.4 (13)C11—C10—H10119.9
C8—N2—N1115.41 (17)C9—C10—H10119.9
C2—O1—H1109.5O4—C11—C10124.5 (2)
C4—O2—H2109.5O4—C11—C12115.55 (18)
C11—O4—C15117.13 (17)C10—C11—C12119.9 (2)
C12—O5—C16116.74 (18)O5—C12—C13124.7 (2)
C17—O6—H6109.5O5—C12—C11115.22 (19)
C6—C1—C2116.94 (18)C13—C12—C11120.03 (19)
C6—C1—C7123.76 (18)C12—C13—C14119.6 (2)
C2—C1—C7119.21 (18)C12—C13—H13120.2
O1—C2—C3117.58 (19)C14—C13—H13120.2
O1—C2—C1121.59 (19)C9—C14—C13120.9 (2)
C3—C2—C1120.83 (19)C9—C14—H14119.6
C4—C3—C2120.42 (19)C13—C14—H14119.6
C4—C3—H3119.8O4—C15—H15A109.5
C2—C3—H3119.8O4—C15—H15B109.5
O2—C4—C3117.89 (18)H15A—C15—H15B109.5
O2—C4—C5121.9 (2)O4—C15—H15C109.5
C3—C4—C5120.2 (2)H15A—C15—H15C109.5
C6—C5—C4119.1 (2)H15B—C15—H15C109.5
C6—C5—H5120.4O5—C16—H16A109.5
C4—C5—H5120.4O5—C16—H16B109.5
C5—C6—C1122.43 (19)H16A—C16—H16B109.5
C5—C6—H6A118.8O5—C16—H16C109.5
C1—C6—H6A118.8H16A—C16—H16C109.5
O3—C7—N1120.01 (19)H16B—C16—H16C109.5
O3—C7—C1121.63 (19)O6—C17—H17A109.5
N1—C7—C1118.35 (19)O6—C17—H17B109.5
N2—C8—C9122.7 (2)H17A—C17—H17B109.5
N2—C8—H8118.7O6—C17—H17C109.5
C9—C8—H8118.7H17A—C17—H17C109.5
C14—C9—C10119.45 (18)H17B—C17—H17C109.5
C14—C9—C8119.44 (19)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O2i0.90 (1)2.22 (1)3.108 (2)170 (2)
O6—H6···N2ii0.822.553.133 (2)129
O6—H6···O3ii0.822.022.807 (2)161
O2—H2···O6iii0.821.792.599 (2)171
O1—H1···O30.821.802.534 (2)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O2i0.90 (1)2.217 (10)3.108 (2)170 (2)
O6—H6⋯N2ii0.822.553.133 (2)129
O6—H6⋯O3ii0.822.022.807 (2)161
O2—H2⋯O6iii0.821.792.599 (2)171
O1—H1⋯O30.821.802.534 (2)148

Symmetry codes: (i) ; (ii) ; (iii) .

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