Literature DB >> 21577845

A chiral photochromic Schiff base: (R)-4-meth-oxy-2-[(1-phenyl-ethyl)imino-meth-yl]phenol.

Yukie Miura1, Yoshikazu Aritake, Takashiro Akitsu.   

Abstract

The title chiral photochromic Schiff base compound, C(16)H(17)NO(2), was synthesized from (R)-1-phenyl-ethyl-amine and 5-methoxy-salicylaldehyde. The mol-ecule of the title compound exists in the phenol-imine tautomeric form. The dihedral angle between the two aromatic rings is 62.61 (11)°. An intra-molecular O-H⋯N hydrogen bond with an O⋯N distance of 2.589 (2) Å is observed. The crystal packing is stabilized by C-H⋯π inter-actions involving the aromatic ring.

Entities:  

Year:  2009        PMID: 21577845      PMCID: PMC2970391          DOI: 10.1107/S1600536809035557

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For chiral metal complexes and their hybrid materials, see: Akitsu (2007 ▶); Akitsu & Einaga (2004 ▶, 2005a ▶,b ▶, 2006a ▶); Akitsu et al. (2009 ▶); Yamada (1999 ▶). For structral comparison of the 1-phenylethylamine moiety, see: Antonov et al. (1995 ▶); Liu et al. (1997 ▶). For related Schiff base ligands and their functions, see: Akitsu et al. (2004 ▶); Akitsu & Einaga (2006b ▶); Hadjoudis et al. (1987 ▶, 2004 ▶); Santoni & Rehder (2004 ▶); Sliwa et al. (2005 ▶).

Experimental

Crystal data

C16H17NO2 M = 255.31 Monoclinic, a = 8.270 (4) Å b = 5.886 (3) Å c = 13.920 (7) Å β = 93.254 (7)° V = 676.4 (6) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.21 × 0.19 × 0.07 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.983, T max = 0.994 3805 measured reflections 1677 independent reflections 1454 reflections with I > 2σ(I) R int = 0.074

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.088 S = 0.99 1677 reflections 240 parameters 1 restraint All H-atom parameters refined Δρmax = 0.31 e Å−3 Δρmin = −0.18 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809035557/ci2897sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809035557/ci2897Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report Enhanced figure: interactive version of Fig. 1
C16H17NO2F(000) = 272
Mr = 255.31Dx = 1.253 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 1657 reflections
a = 8.270 (4) Åθ = 2.5–27.5°
b = 5.886 (3) ŵ = 0.08 mm1
c = 13.920 (7) ÅT = 100 K
β = 93.254 (7)°Plate, yellow
V = 676.4 (6) Å30.21 × 0.19 × 0.07 mm
Z = 2
Brruker SMART CCD area-detector diffractometer1677 independent reflections
Radiation source: fine-focus sealed tube1454 reflections with I > 2σ(I)
graphiteRint = 0.074
Detector resolution: 8.333 pixels mm-1θmax = 27.5°, θmin = 1.5°
φ and ω scansh = −10→8
Absorption correction: multi-scan (SADABS; Bruker, 1998)k = −7→7
Tmin = 0.983, Tmax = 0.994l = −17→16
3805 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088All H-atom parameters refined
S = 0.99w = 1/[σ2(Fo2) + (0.038P)2] where P = (Fo2 + 2Fc2)/3
1677 reflections(Δ/σ)max = 0.001
240 parametersΔρmax = 0.31 e Å3
1 restraintΔρmin = −0.18 e Å3
Experimental. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R– factors based on ALL data will be even larger.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
O1−0.10235 (18)0.3421 (3)0.24677 (11)0.0246 (4)
O2−0.34502 (18)0.0560 (3)−0.11019 (11)0.0236 (4)
N10.0495 (2)−0.0409 (3)0.26781 (13)0.0209 (4)
C1−0.1599 (2)0.2610 (4)0.15989 (16)0.0204 (5)
C2−0.2717 (3)0.3907 (4)0.10592 (17)0.0235 (5)
C3−0.3316 (2)0.3147 (4)0.01743 (17)0.0214 (5)
C4−0.2782 (2)0.1095 (4)−0.02039 (15)0.0202 (5)
C5−0.1684 (3)−0.0231 (4)0.03255 (16)0.0200 (5)
C6−0.1087 (2)0.0500 (4)0.12470 (15)0.0190 (5)
C70.0002 (2)−0.0964 (4)0.18197 (16)0.0198 (5)
C80.1607 (3)−0.1916 (4)0.32334 (16)0.0204 (5)
C90.0764 (3)−0.2731 (5)0.41192 (19)0.0253 (6)
C100.3138 (2)−0.0565 (4)0.34822 (15)0.0200 (5)
C150.4606 (3)−0.1240 (5)0.31292 (16)0.0237 (5)
C140.5988 (3)0.0075 (5)0.32986 (17)0.0265 (6)
C130.5917 (3)0.2063 (5)0.38184 (17)0.0269 (6)
C120.4471 (3)0.2741 (5)0.41913 (16)0.0251 (5)
C110.3098 (3)0.1428 (4)0.40203 (16)0.0224 (5)
C16−0.3038 (3)−0.1589 (5)−0.14857 (18)0.0255 (6)
H1−0.041 (3)0.216 (6)0.2758 (19)0.044 (9)*
H2−0.307 (3)0.526 (5)0.1294 (16)0.020 (6)*
H3−0.408 (3)0.398 (5)−0.0179 (16)0.024 (6)*
H5−0.129 (3)−0.164 (4)0.0095 (14)0.013 (6)*
H70.039 (3)−0.236 (5)0.1538 (15)0.021 (6)*
H80.186 (3)−0.326 (5)0.2845 (16)0.022 (6)*
H150.466 (3)−0.261 (5)0.2753 (19)0.036 (8)*
H140.701 (3)−0.044 (5)0.3014 (16)0.030 (7)*
H130.684 (3)0.319 (6)0.390 (2)0.046 (8)*
H120.443 (3)0.421 (5)0.4568 (16)0.028 (7)*
H110.210 (3)0.198 (5)0.4247 (16)0.029 (6)*
H9A0.045 (3)−0.149 (5)0.4484 (17)0.031 (7)*
H16A−0.330 (3)−0.274 (5)−0.1053 (18)0.031 (7)*
H9B−0.020 (3)−0.371 (5)0.3935 (16)0.026 (6)*
H16B−0.191 (3)−0.172 (4)−0.1610 (14)0.014 (5)*
H9C0.147 (3)−0.381 (6)0.4531 (19)0.043 (8)*
H16C−0.365 (3)−0.172 (5)−0.2090 (18)0.027 (7)*
U11U22U33U12U13U23
O10.0236 (8)0.0249 (10)0.0252 (9)−0.0010 (8)0.0002 (7)−0.0063 (8)
O20.0230 (8)0.0276 (10)0.0198 (8)0.0002 (7)−0.0012 (6)0.0021 (8)
N10.0171 (8)0.0238 (11)0.0218 (10)−0.0012 (8)0.0011 (7)−0.0013 (9)
C10.0191 (10)0.0217 (14)0.0208 (12)−0.0029 (10)0.0046 (9)−0.0015 (10)
C20.0208 (10)0.0195 (13)0.0306 (13)0.0001 (10)0.0055 (9)−0.0011 (12)
C30.0144 (10)0.0230 (13)0.0268 (13)0.0015 (9)0.0023 (9)0.0066 (11)
C40.0174 (10)0.0251 (14)0.0184 (12)−0.0031 (9)0.0035 (9)0.0022 (10)
C50.0173 (10)0.0210 (13)0.0219 (12)−0.0021 (9)0.0033 (8)−0.0003 (10)
C60.0160 (9)0.0203 (12)0.0209 (11)−0.0021 (9)0.0031 (9)0.0001 (10)
C70.0155 (9)0.0230 (13)0.0212 (12)−0.0017 (9)0.0043 (8)0.0002 (10)
C80.0202 (10)0.0194 (12)0.0215 (12)0.0014 (9)0.0002 (9)−0.0014 (10)
C90.0233 (11)0.0265 (14)0.0263 (13)−0.0046 (11)0.0019 (10)0.0000 (11)
C100.0219 (10)0.0228 (13)0.0149 (11)−0.0009 (10)−0.0015 (8)0.0034 (10)
C150.0234 (11)0.0286 (14)0.0193 (12)0.0033 (10)0.0024 (9)0.0005 (11)
C140.0213 (11)0.0342 (16)0.0242 (13)0.0011 (10)0.0042 (9)0.0044 (11)
C130.0258 (12)0.0322 (15)0.0224 (13)−0.0081 (11)−0.0012 (10)0.0043 (11)
C120.0302 (12)0.0255 (14)0.0192 (12)−0.0041 (11)−0.0014 (9)0.0002 (11)
C110.0219 (11)0.0233 (13)0.0219 (12)0.0021 (10)0.0011 (9)0.0000 (10)
C160.0269 (12)0.0280 (15)0.0217 (14)0.0011 (11)0.0011 (10)−0.0009 (12)
O1—C11.361 (3)C8—H80.99 (3)
O1—H10.98 (3)C9—H9A0.93 (3)
O2—C41.374 (3)C9—H9B1.00 (3)
O2—C161.422 (3)C9—H9C1.02 (3)
N1—C71.283 (3)C10—C151.393 (3)
N1—C81.466 (3)C10—C111.393 (3)
C1—C21.387 (3)C15—C141.390 (4)
C1—C61.409 (3)C15—H150.96 (3)
C2—C31.376 (3)C14—C131.379 (4)
C2—H20.91 (3)C14—H141.00 (2)
C3—C41.399 (3)C13—C121.389 (3)
C3—H30.92 (3)C13—H131.01 (3)
C4—C51.379 (3)C12—C111.383 (3)
C5—C61.415 (3)C12—H121.01 (3)
C5—H50.95 (2)C11—H110.95 (3)
C6—C71.452 (3)C16—H16A0.94 (3)
C7—H70.97 (3)C16—H16B0.96 (2)
C8—C101.519 (3)C16—H16C0.96 (3)
C8—C91.528 (3)
C1—O1—H1104.5 (17)C8—C9—H9A110.3 (16)
C4—O2—C16116.9 (2)C8—C9—H9B111.4 (13)
C7—N1—C8119.6 (2)H9A—C9—H9B111 (2)
O1—C1—C2118.5 (2)C8—C9—H9C112.1 (14)
O1—C1—C6121.4 (2)H9A—C9—H9C110 (2)
C2—C1—C6120.1 (2)H9B—C9—H9C102 (2)
C3—C2—C1120.0 (2)C15—C10—C11118.5 (2)
C3—C2—H2119.8 (16)C15—C10—C8120.2 (2)
C1—C2—H2120.2 (16)C11—C10—C8121.22 (19)
C2—C3—C4120.8 (2)C14—C15—C10120.4 (2)
C2—C3—H3120.4 (16)C14—C15—H15119.8 (16)
C4—C3—H3118.8 (16)C10—C15—H15119.8 (16)
O2—C4—C5125.1 (2)C13—C14—C15120.2 (2)
O2—C4—C3114.9 (2)C13—C14—H14121.9 (17)
C5—C4—C3120.0 (2)C15—C14—H14117.9 (17)
C4—C5—C6119.9 (2)C14—C13—C12120.2 (2)
C4—C5—H5122.7 (14)C14—C13—H13124.3 (17)
C6—C5—H5117.4 (14)C12—C13—H13115.3 (18)
C1—C6—C5119.1 (2)C11—C12—C13119.4 (2)
C1—C6—C7121.4 (2)C11—C12—H12121.2 (14)
C5—C6—C7119.4 (2)C13—C12—H12119.4 (14)
N1—C7—C6121.0 (2)C12—C11—C10121.2 (2)
N1—C7—H7119.8 (14)C12—C11—H11117.8 (17)
C6—C7—H7119.2 (14)C10—C11—H11120.8 (17)
N1—C8—C10107.1 (2)O2—C16—H16A109.4 (17)
N1—C8—C9108.32 (18)O2—C16—H16B113.2 (14)
C10—C8—C9113.1 (2)H16A—C16—H16B109 (2)
N1—C8—H8110.1 (14)O2—C16—H16C106.1 (17)
C10—C8—H8110.1 (14)H16A—C16—H16C112 (2)
C9—C8—H8108.1 (14)H16B—C16—H16C107.6 (18)
O1—C1—C2—C3179.53 (18)C1—C6—C7—N12.0 (3)
C6—C1—C2—C3−0.6 (3)C5—C6—C7—N1−176.18 (18)
C1—C2—C3—C4−1.6 (3)C7—N1—C8—C10120.2 (2)
C16—O2—C4—C53.7 (3)C7—N1—C8—C9−117.5 (2)
C16—O2—C4—C3−175.42 (18)N1—C8—C10—C15−116.8 (2)
C2—C3—C4—O2−178.62 (18)C9—C8—C10—C15124.0 (2)
C2—C3—C4—C52.2 (3)N1—C8—C10—C1159.8 (3)
O2—C4—C5—C6−179.69 (17)C9—C8—C10—C11−59.5 (3)
C3—C4—C5—C6−0.6 (3)C11—C10—C15—C14−1.1 (3)
O1—C1—C6—C5−177.98 (17)C8—C10—C15—C14175.5 (2)
C2—C1—C6—C52.2 (3)C10—C15—C14—C130.0 (4)
O1—C1—C6—C73.8 (3)C15—C14—C13—C121.2 (4)
C2—C1—C6—C7−176.03 (19)C14—C13—C12—C11−1.3 (4)
C4—C5—C6—C1−1.5 (3)C13—C12—C11—C100.1 (4)
C4—C5—C6—C7176.70 (19)C15—C10—C11—C121.1 (3)
C8—N1—C7—C6−179.40 (18)C8—C10—C11—C12−175.5 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.97 (3)1.72 (5)2.589 (2)151 (3)
C12—H12···Cg1i1.03 (4)2.72 (3)3.536 (3)137 (3)
C16—H16C···Cg1ii0.98 (4)2.71 (3)3.563 (3)149 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.97 (3)1.72 (5)2.589 (2)151 (3)
C12—H12⋯Cg1i1.03 (4)2.72 (3)3.536 (3)137 (3)
C16—H16CCg1ii0.98 (4)2.71 (3)3.563 (3)149 (3)

Symmetry codes: (i) ; (ii) . Cg 1 is the centroid of the C10–C15 ring.

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Racemic 3,5-dichloro-2-[[(1-phenylethyl)imino]methyl]phenol.

Authors:  Takashiro Akitsu; Yuiri Takeuchi; Yasuaki Einaga
Journal:  Acta Crystallogr C       Date:  2004-10-22       Impact factor: 1.172

3.  Bis[(R)-3,5-dichloro-N-(1-phenylethyl)salicylideneaminato-kappa2N,O]copper(II) and bis[(R)-3-ethoxy-N-(1-phenylethyl)salicylideneaminato-kappa2N,O]copper(II).

Authors:  Takashiro Akitsu; Yasuaki Einaga
Journal:  Acta Crystallogr C       Date:  2004-11-11       Impact factor: 1.172

4.  Structural models for the reduced form of vanadate-dependent peroxidases: vanadyl complexes with bidentate chiral Schiff base ligands.

Authors:  Gabriella Santoni; Dieter Rehder
Journal:  J Inorg Biochem       Date:  2004-05       Impact factor: 4.155

  4 in total
  6 in total

1.  4-Phenyl-diazenyl-2-[(R)-(1-phenyl-ethyl)imino-meth-yl]phenol.

Authors:  Yoshikazu Aritake; Yoshimasa Watanabe; Takashiro Akitsu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-06

2.  2-(1H-Benzimidazol-2-yl)-4-nitro-phenol.

Authors:  Jingya Sun; Xiangdi Tong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-15

3.  2-Bromo-4-chloro-6-(cyclo-hexyl-imino-meth-yl)phenol.

Authors:  Dong-Yue Wang; Xu-Feng Meng; Jing-Jun Ma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-02

4.  4-Dimethyl-amino-N'-(2-hy-droxy-4-meth-oxy-benzyl-idene)benzohydrazide methanol monosolvate.

Authors:  Jingya Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-26

5.  N'-(3,5-Dichloro-2-hy-droxy-benzyl-idene)-4-(dimethyl-amino)-benzohydrazide methanol monosolvate.

Authors:  Huanzhi Xu; Jingya Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-10

6.  Crystal structure of 2-{(R)-[1-(4-bromo-phen-yl)eth-yl]imino-meth-yl}-4-(phenyl-diazen-yl)phenol, a chiral photochromic Schiff base.

Authors:  Ryoji Moriwaki; Takashiro Akitsu
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-10-28
  6 in total

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