Literature DB >> 21577703

Poly[[μ(2)-1,4-bis-(imidazol-1-ylmeth-yl)benzene]bis-(μ(4)-cyclo-hexane-1,4-dicarboxyl-ato)dicobalt(II)].

Qun-Di Yu, Da-Jun Sun, Edward R T Tiekink.   

Abstract

In the title compound, [Co(2)(C(8)H(10)O(4))(2)(C(14)H(14)N(4))](n), the two Co(II) atoms are both five-coordinated by four carboxyl-ate O atoms, derived from two different cyclo-hexane-1,4-dicarboxyl-ate (chdc) ligands, and an N atom, derived from one end of a 1,4-bis-(imidazol-1-ylmeth-yl)benzene mol-ecule (1,4-bix), in a distorted square-pyramidal environment. Each end of the chdc ligand links pairs of Co(II) atoms into a paddle-wheel assembly, i.e. Co(2)(O(2)CR')(4); these are connected into rows because of the bridging nature of the chdc ligands, and the rows are further connected into a two-dimensional layer through the 1,4-bix ligands. The 1,4-bix ligand, which is disposed about a centre of inversion, is disorderd. Two positions were discerned for the -CH(2)(C(6)H(4))CH(2)- residue, with the major component having a site-occupancy factor of 0.512 (9).

Entities:  

Year:  2009        PMID: 21577703      PMCID: PMC2970306          DOI: 10.1107/S160053680903428X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to coordination polymers, see: Yang et al. (2008 ▶). For the isotypic Ni(II) structure, see: Li et al. (2009 ▶).

Experimental

Crystal data

[Co2(C8H10O4)2(C14H14N4)] M = 696.48 Triclinic, a = 8.5415 (6) Å b = 8.8051 (5) Å c = 10.8007 (5) Å α = 93.824 (4)° β = 100.940 (4)° γ = 105.413 (5)° V = 762.95 (8) Å3 Z = 1 Mo Kα radiation μ = 1.14 mm−1 T = 293 K 0.24 × 0.22 × 0.21 mm

Data collection

Bruker APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.756, T max = 0.788 6296 measured reflections 2663 independent reflections 2212 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.150 S = 1.06 2663 reflections 206 parameters 30 restraints H-atom parameters constrained Δρmax = 1.34 e Å−3 Δρmin = −1.40 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680903428X/bt5034sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680903428X/bt5034Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co2(C8H10O4)2(C14H14N4)]Z = 1
Mr = 696.48F(000) = 360
Triclinic, P1Dx = 1.516 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.5415 (6) ÅCell parameters from 2663 reflections
b = 8.8051 (5) Åθ = 3.0–25.0°
c = 10.8007 (5) ŵ = 1.14 mm1
α = 93.824 (4)°T = 293 K
β = 100.940 (4)°Block, purple
γ = 105.413 (5)°0.24 × 0.22 × 0.21 mm
V = 762.95 (8) Å3
Bruker APEX diffractometer2663 independent reflections
Radiation source: fine-focus sealed tube2212 reflections with I > 2σ(I)
graphiteRint = 0.030
φ and ω scansθmax = 25.0°, θmin = 4.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→10
Tmin = 0.756, Tmax = 0.788k = −10→10
6296 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.150H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0864P)2 + 1.1188P] where P = (Fo2 + 2Fc2)/3
2663 reflections(Δ/σ)max = 0.001
206 parametersΔρmax = 1.34 e Å3
30 restraintsΔρmin = −1.40 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Co1.02761 (7)0.46504 (6)0.62430 (5)0.0287 (2)
O10.9612 (4)0.6678 (4)0.6589 (3)0.0424 (8)
O20.9184 (4)0.7201 (4)0.4586 (3)0.0416 (8)
O30.2725 (4)0.5894 (4)0.6746 (3)0.0469 (8)
O40.2232 (4)0.6331 (4)0.4730 (3)0.0471 (8)
N10.9757 (6)0.3705 (5)0.7847 (4)0.0516 (8)
C10.9135 (5)0.7472 (5)0.5736 (4)0.0320 (9)
C20.8510 (5)0.8860 (5)0.6110 (4)0.0336 (10)
H20.94670.98100.62990.040*
C30.7803 (6)0.8675 (6)0.7305 (4)0.0432 (11)
H3A0.86030.84300.79690.052*
H3B0.76350.96740.75970.052*
C40.6161 (5)0.7374 (6)0.7083 (4)0.0370 (10)
H4A0.63360.63570.68520.044*
H4B0.57460.73200.78590.044*
C50.4889 (5)0.7709 (5)0.6026 (4)0.0268 (8)
H50.47770.87520.62960.032*
C60.5562 (5)0.7871 (5)0.4806 (4)0.0337 (10)
H6A0.57100.68660.45070.040*
H6B0.47610.81310.41520.040*
C70.7222 (6)0.9163 (5)0.5037 (5)0.0382 (10)
H7A0.76430.92020.42630.046*
H7B0.70491.01850.52520.046*
C80.3170 (5)0.6554 (5)0.5811 (4)0.0337 (10)
C91.0536 (7)0.2819 (7)0.8583 (6)0.0653 (17)
H91.14460.24840.84610.078*
C100.9687 (11)0.2518 (9)0.9557 (6)0.104 (3)
H100.99350.19301.02130.125*
C110.8543 (7)0.3871 (6)0.8375 (5)0.0512 (13)
H110.77950.44180.80480.061*
N20.8493 (6)0.3188 (5)0.9406 (4)0.0516 (8)
C120.7737 (19)0.2877 (17)1.0436 (13)0.055 (3)0.488 (9)
H12A0.71960.36901.05840.066*0.488 (9)
H12B0.85910.29451.11880.066*0.488 (9)
C130.6462 (19)0.1259 (17)1.0251 (14)0.047 (3)0.488 (9)
C140.653 (3)0.034 (3)1.120 (2)0.064 (5)0.488 (9)
H140.73790.03931.18930.077*0.488 (9)
C150.516 (3)0.076 (3)0.9209 (18)0.062 (4)0.488 (9)
H150.54340.13020.85360.074*0.488 (9)
C12'0.6974 (18)0.3329 (16)1.0078 (12)0.055 (3)0.512 (9)
H12C0.74100.37831.09600.066*0.512 (9)
H12D0.63910.40170.96480.066*0.512 (9)
C13'0.5796 (18)0.1695 (16)1.0001 (13)0.047 (3)0.512 (9)
C14'0.598 (3)0.076 (3)1.093 (2)0.064 (5)0.512 (9)
H14'0.65960.13671.16950.077*0.512 (9)
C15'0.456 (2)0.110 (3)0.8901 (17)0.062 (4)0.512 (9)
H15'0.41580.16370.82540.074*0.512 (9)
U11U22U33U12U13U23
Co0.0260 (3)0.0332 (3)0.0288 (3)0.0076 (2)0.0100 (2)0.0080 (2)
O10.0416 (19)0.0388 (17)0.0489 (18)0.0177 (15)0.0047 (15)0.0077 (15)
O20.045 (2)0.0374 (17)0.0500 (19)0.0156 (15)0.0224 (15)0.0082 (14)
O30.0319 (18)0.052 (2)0.054 (2)−0.0014 (15)0.0210 (15)0.0051 (16)
O40.0237 (17)0.051 (2)0.056 (2)0.0035 (15)−0.0051 (15)0.0008 (16)
N10.056 (2)0.0509 (18)0.0342 (15)−0.0122 (15)0.0144 (14)0.0067 (13)
C10.017 (2)0.027 (2)0.049 (3)0.0003 (16)0.0098 (18)0.0050 (19)
C20.019 (2)0.027 (2)0.052 (3)0.0010 (16)0.0096 (18)0.0020 (19)
C30.026 (2)0.058 (3)0.040 (2)0.011 (2)−0.0007 (19)−0.010 (2)
C40.027 (2)0.054 (3)0.034 (2)0.014 (2)0.0094 (18)0.015 (2)
C50.018 (2)0.029 (2)0.035 (2)0.0073 (16)0.0076 (16)0.0060 (17)
C60.026 (2)0.043 (2)0.034 (2)0.0116 (19)0.0066 (17)0.0079 (18)
C70.032 (2)0.037 (2)0.055 (3)0.016 (2)0.021 (2)0.019 (2)
C80.026 (2)0.031 (2)0.047 (3)0.0101 (18)0.013 (2)0.0025 (19)
C90.051 (3)0.057 (3)0.074 (4)0.004 (3)−0.012 (3)0.035 (3)
C100.128 (7)0.085 (5)0.041 (3)−0.046 (5)−0.023 (4)0.047 (3)
C110.052 (3)0.051 (3)0.048 (3)−0.005 (2)0.031 (2)0.005 (2)
N20.056 (2)0.0509 (18)0.0342 (15)−0.0122 (15)0.0144 (14)0.0067 (13)
C120.064 (9)0.051 (6)0.041 (6)−0.012 (5)0.034 (6)−0.005 (4)
C130.056 (9)0.040 (6)0.044 (5)−0.007 (4)0.038 (6)−0.006 (4)
C140.060 (13)0.074 (12)0.043 (8)−0.014 (7)0.021 (8)−0.005 (7)
C150.071 (12)0.067 (9)0.040 (8)−0.002 (7)0.022 (7)0.011 (5)
C12'0.064 (9)0.051 (6)0.041 (6)−0.012 (5)0.034 (6)−0.005 (4)
C13'0.056 (9)0.040 (6)0.044 (5)−0.007 (4)0.038 (6)−0.006 (4)
C14'0.060 (13)0.074 (12)0.043 (8)−0.014 (7)0.021 (8)−0.005 (7)
C15'0.071 (12)0.067 (9)0.040 (8)−0.002 (7)0.022 (7)0.011 (5)
Co—O2i2.008 (3)C6—H6B0.9700
Co—O3ii2.035 (3)C7—H7A0.9700
Co—O12.044 (3)C7—H7B0.9700
Co—N12.044 (4)C9—C101.388 (10)
Co—O4iii2.117 (3)C9—H90.9300
Co—Coi2.7758 (10)C10—N21.298 (11)
O1—C11.265 (5)C10—H100.9300
O2—C11.260 (5)C11—N21.303 (7)
O2—Coi2.008 (3)C11—H110.9300
O3—C81.268 (6)N2—C121.395 (13)
O3—Coiv2.035 (3)N2—C12'1.630 (14)
O4—C81.255 (5)C12—C131.52 (2)
O4—Coiii2.117 (3)C12—H12A0.9700
N1—C111.310 (7)C12—H12B0.9700
N1—C91.356 (7)C13—C141.34 (3)
C1—C21.518 (6)C13—C151.38 (2)
C2—C31.526 (6)C14—C15v1.47 (4)
C2—C71.528 (6)C14—H140.9300
C2—H20.9800C15—C14v1.47 (4)
C3—C41.522 (6)C15—H150.9300
C3—H3A0.9700C12'—C13'1.507 (19)
C3—H3B0.9700C12'—H12C0.9700
C4—C51.521 (5)C12'—H12D0.9700
C4—H4A0.9700C13'—C14'1.35 (3)
C4—H4B0.9700C13'—C15'1.40 (2)
C5—C81.513 (6)C14'—C15'v1.62 (3)
C5—C61.535 (6)C14'—H14'0.9300
C5—H50.9800C15'—C14'v1.62 (3)
C6—C71.529 (6)C15'—H15'0.9300
C6—H6A0.9700
O2i—Co—O3ii91.45 (14)C2—C7—C6111.7 (3)
O2i—Co—O1164.36 (13)C2—C7—H7A109.3
O3ii—Co—O190.51 (14)C6—C7—H7A109.3
O2i—Co—N198.07 (16)C2—C7—H7B109.3
O3ii—Co—N1104.53 (16)C6—C7—H7B109.3
O1—Co—N196.44 (16)H7A—C7—H7B107.9
O2i—Co—O4iii88.63 (14)O4—C8—O3123.1 (4)
O3ii—Co—O4iii164.38 (14)O4—C8—C5118.6 (4)
O1—Co—O4iii85.35 (13)O3—C8—C5118.3 (4)
N1—Co—O4iii90.91 (16)N1—C9—C10105.5 (7)
O2i—Co—Coi81.73 (9)N1—C9—H9127.3
O3ii—Co—Coi97.00 (10)C10—C9—H9127.3
O1—Co—Coi82.63 (9)N2—C10—C9109.2 (5)
N1—Co—Coi158.46 (13)N2—C10—H10125.4
O4iii—Co—Coi67.55 (10)C9—C10—H10125.4
C1—O1—Co124.3 (3)N2—C11—N1112.8 (6)
C1—O2—Coi127.3 (3)N2—C11—H11123.6
C8—O3—Coiv109.5 (3)N1—C11—H11123.6
C8—O4—Coiii142.2 (3)C10—N2—C11106.6 (5)
C11—N1—C9105.9 (5)C10—N2—C12105.7 (9)
C11—N1—Co124.5 (4)C11—N2—C12147.6 (9)
C9—N1—Co129.6 (4)C10—N2—C12'138.7 (7)
O2—C1—O1123.6 (4)C11—N2—C12'114.6 (7)
O2—C1—C2117.6 (4)C12—N2—C12'33.2 (7)
O1—C1—C2118.8 (4)N2—C12—C13113.8 (10)
C1—C2—C3112.7 (4)N2—C12—H12A108.8
C1—C2—C7112.7 (4)C13—C12—H12A108.8
C3—C2—C7109.5 (4)N2—C12—H12B108.8
C1—C2—H2107.2C13—C12—H12B108.8
C3—C2—H2107.2H12A—C12—H12B107.7
C7—C2—H2107.2C14—C13—C15118.9 (18)
C4—C3—C2112.5 (4)C14—C13—C12118.3 (16)
C4—C3—H3A109.1C15—C13—C12122.6 (15)
C2—C3—H3A109.1C13—C14—C15v98.2 (16)
C4—C3—H3B109.1C13—C14—H14130.9
C2—C3—H3B109.1C15v—C14—H14130.9
H3A—C3—H3B107.8C13—C15—C14v141.3 (19)
C5—C4—C3110.3 (4)C13—C15—H15109.3
C5—C4—H4A109.6C14v—C15—H15109.3
C3—C4—H4A109.6C13'—C12'—N2108.8 (9)
C5—C4—H4B109.6C13'—C12'—H12C109.9
C3—C4—H4B109.6N2—C12'—H12C109.9
H4A—C4—H4B108.1C13'—C12'—H12D109.9
C8—C5—C4114.2 (3)N2—C12'—H12D109.9
C8—C5—C6112.8 (3)H12C—C12'—H12D108.3
C4—C5—C6110.2 (3)C14'—C13'—C15'119.8 (17)
C8—C5—H5106.3C14'—C13'—C12'121.5 (15)
C4—C5—H5106.3C15'—C13'—C12'118.6 (13)
C6—C5—H5106.3C13'—C14'—C15'v138.1 (19)
C7—C6—C5111.1 (3)C13'—C14'—H14'111.0
C7—C6—H6A109.4C15'v—C14'—H14'111.0
C5—C6—H6A109.4C13'—C15'—C14'v100.5 (13)
C7—C6—H6B109.4C13'—C15'—H15'129.7
C5—C6—H6B109.4C14'v—C15'—H15'129.7
H6A—C6—H6B108.0
O2i—Co—O1—C13.5 (7)Coiv—O3—C8—O4−5.3 (5)
O3ii—Co—O1—C1100.7 (3)Coiv—O3—C8—C5172.4 (3)
N1—Co—O1—C1−154.6 (3)C4—C5—C8—O4−153.7 (4)
O4iii—Co—O1—C1−64.2 (3)C6—C5—C8—O4−26.8 (5)
Coi—Co—O1—C13.7 (3)C4—C5—C8—O328.5 (5)
O2i—Co—N1—C11−139.8 (4)C6—C5—C8—O3155.4 (4)
O3ii—Co—N1—C11126.6 (4)C11—N1—C9—C10−0.6 (6)
O1—Co—N1—C1134.4 (4)Co—N1—C9—C10179.1 (4)
O4iii—Co—N1—C11−51.1 (4)N1—C9—C10—N2−0.2 (7)
Coi—Co—N1—C11−51.9 (6)C9—N1—C11—N21.2 (6)
O2i—Co—N1—C940.6 (5)Co—N1—C11—N2−178.5 (3)
O3ii—Co—N1—C9−53.1 (5)C9—C10—N2—C110.9 (7)
O1—Co—N1—C9−145.3 (5)C9—C10—N2—C12−178.2 (7)
O4iii—Co—N1—C9129.3 (5)C9—C10—N2—C12'177.2 (8)
Coi—Co—N1—C9128.5 (5)N1—C11—N2—C10−1.3 (6)
Coi—O2—C1—O18.4 (6)N1—C11—N2—C12177.0 (12)
Coi—O2—C1—C2−173.4 (3)N1—C11—N2—C12'−178.7 (6)
Co—O1—C1—O2−8.0 (6)C10—N2—C12—C13−83.2 (12)
Co—O1—C1—C2173.8 (3)C11—N2—C12—C1398.5 (15)
O2—C1—C2—C3155.3 (4)C12'—N2—C12—C1391.3 (19)
O1—C1—C2—C3−26.4 (5)N2—C12—C13—C14132.3 (16)
O2—C1—C2—C730.8 (5)N2—C12—C13—C15−54 (2)
O1—C1—C2—C7−150.9 (4)C15—C13—C14—C15v−12 (3)
C1—C2—C3—C4−70.3 (5)C12—C13—C14—C15v162.6 (15)
C7—C2—C3—C456.0 (5)C14—C13—C15—C14v18 (4)
C2—C3—C4—C5−57.7 (5)C12—C13—C15—C14v−155 (3)
C3—C4—C5—C8−175.0 (3)C10—N2—C12'—C13'−62.0 (14)
C3—C4—C5—C656.8 (5)C11—N2—C12'—C13'114.1 (10)
C8—C5—C6—C7174.5 (3)C12—N2—C12'—C13'−70.1 (16)
C4—C5—C6—C7−56.6 (5)N2—C12'—C13'—C14'90.6 (17)
C1—C2—C7—C671.5 (5)N2—C12'—C13'—C15'−85.0 (15)
C3—C2—C7—C6−54.8 (5)C15'—C13'—C14'—C15'v18 (4)
C5—C6—C7—C256.1 (5)C12'—C13'—C14'—C15'v−158 (2)
Coiii—O4—C8—O312.1 (8)C14'—C13'—C15'—C14'v−12 (3)
Coiii—O4—C8—C5−165.6 (3)C12'—C13'—C15'—C14'v163.8 (13)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Unusual parallel and inclined interlocking modes in polyrotaxane-like metal-organic frameworks.

Authors:  Jin Yang; Jian-Fang Ma; Stuart R Batten; Zhong-Min Su
Journal:  Chem Commun (Camb)       Date:  2008-03-10       Impact factor: 6.222

3.  Poly[[μ-1,4-bis-(imidazol-1-ylmeth-yl)benzene]bis-(μ(4)-cyclo-hexane-1,4-dicarboxyl-ato)dinickel(II)].

Authors:  Bing-Bing Li; Gai-Xia Fang; Xiao-Na Ji; Bo Xiao; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-31
  3 in total

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