Literature DB >> 21577691

5-Bromo-2,7-dimethyl-3-methyl-sulfinyl-1-benzofuran.

Pil Ja Seo, Hong Dae Choi, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(11)H(11)BrO(2)S, the O atom and the methyl group of the methyl-sulfinyl substituent are located on opposite sides of the plane of the benzofuran fragment. The crystal structure is stabilized by non-classical inter-molecular C-H⋯O hydrogen bonding, and by inter-molecular C-Br⋯π inter-actions, with C-BrCg = 3.629 Å (Cg is the centroid of the benzene ring). In addition, the crystal structure exhibits aromatic π-π interactions between the furan rings of neighbouring molecules [centroid-centroid distance = 4.206 (6) Å].

Entities:  

Year:  2009        PMID: 21577691      PMCID: PMC2970146          DOI: 10.1107/S1600536809034011

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 5-halo-2-methyl-3-methyl­sulfinyl-1-benzofuran derivatives. see: Choi et al. (2007 ▶). For natural products with a benzofuran ring, see: Akgul & Anil (2003 ▶); von Reuss & König (2004 ▶). For the pharmacological activity of benzofuran compounds, see: Howlett et al. (1999 ▶).

Experimental

Crystal data

C11H11BrO2S M = 287.17 Monoclinic, a = 16.929 (2) Å b = 5.1001 (6) Å c = 13.800 (2) Å β = 106.962 (2)° V = 1139.7 (3) Å3 Z = 4 Mo Kα radiation μ = 3.77 mm−1 T = 173 K 0.60 × 0.30 × 0.15 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.211, T max = 0.602 3270 measured reflections 1832 independent reflections 1760 reflections with I > 2σ(I) R int = 0.111

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.102 S = 1.06 1832 reflections 138 parameters 2 restraints H-atom parameters constrained Δρmax = 1.31 e Å−3 Δρmin = −0.82 e Å−3 Absolute structure: Flack (1983 ▶), 582 Friedel pairs Flack parameter: −0.003 (12) Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809034011/hg2560sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809034011/hg2560Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H11BrO2SF(000) = 576
Mr = 287.17Dx = 1.674 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 2606 reflections
a = 16.929 (2) Åθ = 2.5–27.4°
b = 5.1001 (6) ŵ = 3.77 mm1
c = 13.800 (2) ÅT = 173 K
β = 106.962 (2)°Block, colorless
V = 1139.7 (3) Å30.60 × 0.30 × 0.15 mm
Z = 4
Bruker SMART CCD diffractometer1832 independent reflections
Radiation source: fine-focus sealed tube1760 reflections with I > 2σ(I)
graphiteRint = 0.111
Detector resolution: 10.0 pixels mm-1θmax = 27.0°, θmin = 2.5°
φ and ω scansh = −21→19
Absorption correction: multi-scan (SADABS; Sheldrick, 2000)k = −6→6
Tmin = 0.211, Tmax = 0.602l = −13→17
3270 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.102w = 1/[σ2(Fo2) + (0.071P)2 + 0.1P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
1832 reflectionsΔρmax = 1.31 e Å3
138 parametersΔρmin = −0.82 e Å3
2 restraintsAbsolute structure: Flack (1983), 582 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.003 (12)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br0.80657 (3)1.10273 (9)0.53574 (4)0.03592 (18)
S20.47258 (6)0.4834 (2)0.39045 (8)0.0260 (3)
O10.60773 (18)0.2770 (7)0.6641 (2)0.0234 (7)
C20.6253 (2)0.5717 (8)0.5481 (3)0.0210 (9)
C10.5474 (2)0.4374 (8)0.5090 (3)0.0196 (8)
C30.6679 (2)0.7694 (9)0.5131 (3)0.0226 (8)
H30.64700.84670.44970.027*
C90.7699 (3)0.4064 (11)0.8116 (4)0.0362 (13)
H9A0.77680.22200.80270.043*
H9B0.73260.43240.85140.043*
H9C0.82250.48320.84570.043*
C80.5396 (2)0.2678 (9)0.5812 (3)0.0222 (9)
C60.7356 (3)0.5336 (10)0.7103 (3)0.0253 (9)
C40.7437 (3)0.8416 (9)0.5800 (4)0.0261 (9)
C70.6596 (2)0.4648 (9)0.6435 (3)0.0215 (8)
C50.7778 (3)0.7289 (10)0.6741 (4)0.0283 (10)
H50.82940.78370.71390.034*
O20.4684 (2)0.7724 (8)0.3685 (3)0.0389 (10)
C100.4738 (3)0.0806 (9)0.5865 (4)0.0279 (10)
H10A0.42860.09270.52550.042*
H10B0.45480.12270.64370.042*
H10C0.4955−0.09460.59370.042*
C110.5294 (4)0.3399 (11)0.3125 (4)0.0361 (12)
H11A0.49980.36590.24250.054*
H11B0.53620.15550.32640.054*
H11C0.58270.42160.32710.054*
U11U22U33U12U13U23
Br0.0297 (2)0.0241 (2)0.0578 (3)−0.00886 (19)0.01865 (19)−0.0052 (3)
S20.0213 (5)0.0276 (6)0.0247 (5)−0.0042 (4)−0.0002 (4)0.0032 (4)
O10.0239 (15)0.0250 (17)0.0218 (15)−0.0003 (12)0.0075 (12)0.0008 (13)
C20.018 (2)0.019 (2)0.025 (2)0.0008 (14)0.0051 (16)−0.0027 (16)
C10.0152 (17)0.0208 (19)0.0210 (19)−0.0012 (14)0.0024 (14)0.0019 (16)
C30.0211 (19)0.020 (2)0.026 (2)0.0005 (15)0.0066 (16)0.0004 (16)
C90.027 (2)0.051 (4)0.026 (3)0.007 (2)0.0003 (19)−0.002 (2)
C80.0208 (18)0.024 (2)0.021 (2)0.0003 (15)0.0043 (16)−0.0022 (16)
C60.0197 (19)0.027 (2)0.027 (2)0.0039 (16)0.0047 (16)−0.0055 (19)
C40.0216 (19)0.0183 (19)0.040 (3)−0.0028 (15)0.0121 (17)−0.0054 (19)
C70.0190 (18)0.021 (2)0.025 (2)0.0022 (15)0.0071 (15)−0.0030 (18)
C50.0176 (18)0.034 (3)0.032 (2)−0.0017 (16)0.0051 (16)−0.012 (2)
O20.041 (2)0.0286 (19)0.039 (2)0.0081 (16)−0.0001 (18)0.0065 (16)
C100.027 (2)0.023 (2)0.035 (2)−0.0066 (17)0.0121 (19)0.0006 (18)
C110.052 (3)0.031 (3)0.026 (2)−0.007 (2)0.012 (2)−0.002 (2)
Br—C41.913 (5)C9—H9B0.9600
S2—O21.502 (4)C9—H9C0.9600
S2—C11.769 (4)C8—C101.486 (6)
S2—C111.795 (7)C6—C71.391 (6)
O1—C81.368 (5)C6—C51.400 (8)
O1—C71.384 (6)C4—C51.383 (8)
C2—C71.387 (6)C5—H50.9300
C2—C31.404 (7)C10—H10A0.9600
C2—C11.444 (5)C10—H10B0.9600
C1—C81.354 (7)C10—H10C0.9600
C3—C41.394 (6)C11—H11A0.9600
C3—H30.9300C11—H11B0.9600
C9—C61.496 (7)C11—H11C0.9600
C9—H9A0.9600
O2—S2—C1107.2 (2)C7—C6—C9122.8 (5)
O2—S2—C11106.4 (3)C5—C6—C9122.9 (4)
C1—S2—C1197.8 (2)C5—C4—C3124.3 (5)
C8—O1—C7106.4 (3)C5—C4—Br118.1 (3)
C7—C2—C3119.6 (4)C3—C4—Br117.6 (4)
C7—C2—C1104.6 (4)O1—C7—C2110.6 (3)
C3—C2—C1135.8 (4)O1—C7—C6123.9 (4)
C8—C1—C2107.6 (4)C2—C7—C6125.5 (5)
C8—C1—S2124.6 (3)C4—C5—C6121.0 (4)
C2—C1—S2127.7 (4)C4—C5—H5119.5
C4—C3—C2115.3 (4)C6—C5—H5119.5
C4—C3—H3122.4C8—C10—H10A109.5
C2—C3—H3122.4C8—C10—H10B109.5
C6—C9—H9A109.5H10A—C10—H10B109.5
C6—C9—H9B109.5C8—C10—H10C109.5
H9A—C9—H9B109.5H10A—C10—H10C109.5
C6—C9—H9C109.5H10B—C10—H10C109.5
H9A—C9—H9C109.5S2—C11—H11A109.5
H9B—C9—H9C109.5S2—C11—H11B109.5
C1—C8—O1110.8 (4)H11A—C11—H11B109.5
C1—C8—C10133.0 (4)S2—C11—H11C109.5
O1—C8—C10116.2 (4)H11A—C11—H11C109.5
C7—C6—C5114.3 (4)H11B—C11—H11C109.5
C7—C2—C1—C80.8 (5)C2—C3—C4—C51.1 (7)
C3—C2—C1—C8−178.2 (5)C2—C3—C4—Br178.2 (3)
C7—C2—C1—S2179.5 (3)C8—O1—C7—C2−0.7 (5)
C3—C2—C1—S20.6 (8)C8—O1—C7—C6179.5 (4)
O2—S2—C1—C8139.5 (4)C3—C2—C7—O1179.1 (4)
C11—S2—C1—C8−110.6 (5)C1—C2—C7—O1−0.1 (5)
O2—S2—C1—C2−39.0 (5)C3—C2—C7—C6−1.0 (7)
C11—S2—C1—C270.8 (5)C1—C2—C7—C6179.8 (4)
C7—C2—C3—C40.3 (7)C5—C6—C7—O1−179.8 (4)
C1—C2—C3—C4179.1 (5)C9—C6—C7—O11.1 (7)
C2—C1—C8—O1−1.3 (5)C5—C6—C7—C20.4 (7)
S2—C1—C8—O1179.9 (3)C9—C6—C7—C2−178.7 (5)
C2—C1—C8—C10179.1 (5)C3—C4—C5—C6−1.9 (8)
S2—C1—C8—C100.3 (8)Br—C4—C5—C6−179.0 (4)
C7—O1—C8—C11.2 (5)C7—C6—C5—C41.0 (7)
C7—O1—C8—C10−179.0 (4)C9—C6—C5—C4−179.9 (5)
D—H···AD—HH···AD···AD—H···A
C11—H11B···O2i0.962.423.242 (7)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11B⋯O2i0.962.423.242 (7)143

Symmetry code: (i) .

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1.  Inhibition of fibril formation in beta-amyloid peptide by a novel series of benzofurans.

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Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

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4.  Corsifurans A-C, 2-arylbenzofurans of presumed stilbenoid origin from Corsinia coriandrina (Hepaticae).

Authors:  Stephan H von Reuss; Wilfried A König
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2.  5-Bromo-3-cyclo-hexyl-sulfinyl-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
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