Literature DB >> 21577662

Isopropyl 2-[5-(4-hydroxy-phen-yl)-3-methyl-sulfanyl-1-benzofuran-2-yl]acetate.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(20)H(20)O(4)S, the 4-hydroxy-phenyl ring is rotated out of the plane of the benzofuran unit by 32.87 (8)°. The S-C(meth-yl) bond is almost perpendicular to the plane of the benzofuran fragment [77.8 (1)°] and is slightly tilted towards it. The crystal structure is stabilized by inter-molecular O-H⋯O and C-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21577662      PMCID: PMC2970158          DOI: 10.1107/S1600536809033492

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of a similar alkyl 2-[5-(4-hydroxy­phen­yl)-3-methyl­sulfanyl-1-benzofuran-2-yl]acetate derivative, see: Choi et al. (2006 ▶). For the pharmacological activity of benzofuran compounds, see: Howlett et al. (1999 ▶); Twyman & Allsop (1999 ▶). For natural products containing the benzofuran unit, see: Akgul & Anil (2003 ▶); von Reuss & König (2004 ▶).

Experimental

Crystal data

C20H20O4S M = 356.42 Monoclinic, a = 31.375 (3) Å b = 8.0055 (7) Å c = 15.274 (1) Å β = 107.727 (1)° V = 3654.2 (5) Å3 Z = 8 Mo Kα radiation μ = 0.20 mm−1 T = 173 K 0.45 × 0.40 × 0.10 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.916, T max = 0.981 15589 measured reflections 4158 independent reflections 2474 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.111 S = 1.06 4158 reflections 233 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.25 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809033492/bt5043sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033492/bt5043Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H20O4SF(000) = 1504
Mr = 356.42Dx = 1.296 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 4594 reflections
a = 31.375 (3) Åθ = 2.6–27.3°
b = 8.0055 (7) ŵ = 0.20 mm1
c = 15.274 (1) ÅT = 173 K
β = 107.727 (1)°Block, colorless
V = 3654.2 (5) Å30.45 × 0.40 × 0.10 mm
Z = 8
Bruker SMART CCD diffractometer4158 independent reflections
Radiation source: fine-focus sealed tube2474 reflections with I > 2σ(I)
graphiteRint = 0.051
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 1.4°
φ and ω scansh = −39→40
Absorption correction: multi-scan (SADABS; Sheldrick, 2000)k = −10→10
Tmin = 0.916, Tmax = 0.981l = −19→19
15589 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: difference Fourier map
wR(F2) = 0.111H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.024P)2 + 3.8686P] where P = (Fo2 + 2Fc2)/3
4158 reflections(Δ/σ)max < 0.001
233 parametersΔρmax = 0.17 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.15080 (2)0.69811 (7)0.43431 (4)0.0571 (2)
O10.11004 (5)0.2623 (2)0.49946 (11)0.0540 (4)
O20.00249 (5)0.6432 (2)0.36507 (10)0.0547 (4)
O30.04570 (5)0.6124 (2)0.51076 (10)0.0588 (5)
O40.43182 (6)0.2543 (2)0.81139 (14)0.0639 (5)
H40.4366 (11)0.204 (4)0.860 (2)0.097 (12)*
C10.14460 (8)0.4954 (3)0.47235 (15)0.0471 (6)
C20.17779 (8)0.3928 (3)0.53678 (14)0.0430 (5)
C30.22327 (7)0.4045 (3)0.58158 (14)0.0427 (5)
H30.23930.49730.57280.051*
C40.24484 (7)0.2758 (3)0.64005 (14)0.0421 (5)
C50.21960 (8)0.1362 (3)0.65124 (16)0.0501 (6)
H50.23410.05030.68990.060*
C60.17442 (8)0.1219 (3)0.60733 (16)0.0531 (6)
H60.15820.02930.61560.064*
C70.15455 (8)0.2522 (3)0.55045 (16)0.0475 (6)
C80.10569 (8)0.4117 (3)0.45225 (16)0.0517 (6)
C90.06007 (8)0.4503 (3)0.39027 (16)0.0571 (6)
H9A0.04270.34800.37750.069*
H9B0.06250.49240.33240.069*
C100.03578 (7)0.5767 (3)0.43027 (15)0.0459 (5)
C11−0.02201 (8)0.7816 (3)0.39016 (17)0.0596 (7)
H11−0.02510.76150.45120.072*
C12−0.06727 (9)0.7810 (4)0.31955 (19)0.0779 (9)
H12A−0.06400.79790.25970.117*
H12B−0.08520.86920.33270.117*
H12C−0.08160.67560.32110.117*
C130.00498 (10)0.9398 (4)0.3919 (2)0.0810 (9)
H13A0.03360.92960.43790.121*
H13B−0.01081.03370.40600.121*
H13C0.00920.95610.33280.121*
C140.29366 (7)0.2806 (2)0.68845 (14)0.0412 (5)
C150.31181 (8)0.2046 (3)0.77431 (15)0.0482 (6)
H150.29270.15830.80370.058*
C160.35724 (8)0.1966 (3)0.81618 (15)0.0489 (6)
H160.36840.14440.87300.059*
C170.38628 (8)0.2652 (3)0.77459 (15)0.0462 (5)
C180.36918 (8)0.3480 (3)0.69133 (15)0.0472 (5)
H180.38850.39920.66400.057*
C190.32372 (7)0.3543 (2)0.64927 (14)0.0429 (5)
H190.31280.40910.59320.051*
C200.18438 (10)0.6628 (3)0.3595 (2)0.0753 (8)
H20A0.21320.62100.39470.113*
H20B0.18800.76590.33060.113*
H20C0.16990.58250.31340.113*
U11U22U33U12U13U23
S0.0746 (5)0.0372 (3)0.0542 (4)0.0154 (3)0.0118 (3)0.0026 (3)
O10.0501 (10)0.0527 (10)0.0582 (10)0.0071 (8)0.0151 (8)0.0052 (8)
O20.0574 (10)0.0634 (10)0.0371 (8)0.0202 (8)0.0051 (7)−0.0031 (7)
O30.0536 (10)0.0758 (12)0.0392 (9)0.0075 (9)0.0023 (8)−0.0064 (8)
O40.0525 (11)0.0710 (12)0.0578 (12)−0.0048 (9)0.0013 (9)0.0086 (10)
C10.0551 (15)0.0395 (12)0.0441 (13)0.0103 (11)0.0113 (11)−0.0003 (10)
C20.0521 (14)0.0363 (11)0.0416 (12)0.0091 (10)0.0157 (10)0.0003 (9)
C30.0533 (14)0.0339 (11)0.0420 (12)0.0062 (10)0.0162 (11)0.0003 (9)
C40.0509 (13)0.0382 (11)0.0396 (12)0.0093 (10)0.0176 (10)0.0027 (9)
C50.0528 (15)0.0460 (13)0.0554 (14)0.0114 (11)0.0223 (12)0.0146 (11)
C60.0553 (16)0.0467 (13)0.0628 (15)0.0053 (11)0.0262 (13)0.0137 (12)
C70.0440 (14)0.0493 (13)0.0505 (13)0.0080 (10)0.0162 (11)0.0023 (11)
C80.0576 (16)0.0459 (13)0.0490 (14)0.0128 (12)0.0124 (12)−0.0014 (11)
C90.0569 (15)0.0560 (15)0.0518 (14)0.0118 (12)0.0066 (12)−0.0075 (12)
C100.0420 (13)0.0497 (13)0.0405 (13)0.0015 (10)0.0043 (10)−0.0011 (10)
C110.0624 (16)0.0686 (17)0.0468 (14)0.0251 (14)0.0150 (12)−0.0004 (12)
C120.0672 (19)0.096 (2)0.0622 (17)0.0311 (17)0.0075 (14)0.0046 (16)
C130.092 (2)0.0672 (19)0.078 (2)0.0169 (17)0.0178 (18)−0.0034 (15)
C140.0531 (14)0.0326 (11)0.0390 (11)0.0071 (10)0.0154 (10)0.0007 (9)
C150.0576 (15)0.0453 (12)0.0441 (12)0.0056 (11)0.0190 (11)0.0084 (11)
C160.0592 (15)0.0457 (13)0.0381 (12)0.0053 (11)0.0090 (11)0.0048 (10)
C170.0494 (14)0.0392 (12)0.0444 (12)0.0006 (10)0.0059 (11)−0.0040 (10)
C180.0560 (15)0.0417 (12)0.0447 (13)−0.0034 (11)0.0164 (11)−0.0004 (10)
C190.0558 (15)0.0349 (11)0.0373 (11)0.0057 (10)0.0133 (11)0.0033 (9)
C200.099 (2)0.0535 (16)0.0803 (19)0.0075 (15)0.0382 (18)0.0049 (14)
S—C11.754 (2)C9—H9B0.9700
S—C201.796 (3)C11—C121.499 (3)
O1—C71.379 (3)C11—C131.519 (4)
O1—C81.381 (3)C11—H110.9800
O2—C101.316 (3)C12—H12A0.9600
O2—C111.465 (3)C12—H12B0.9600
O3—C101.207 (2)C12—H12C0.9600
O4—C171.370 (3)C13—H13A0.9600
O4—H40.81 (3)C13—H13B0.9600
C1—C81.344 (3)C13—H13C0.9600
C1—C21.450 (3)C14—C191.393 (3)
C2—C31.385 (3)C14—C151.400 (3)
C2—C71.391 (3)C15—C161.374 (3)
C3—C41.396 (3)C15—H150.9300
C3—H30.9300C16—C171.374 (3)
C4—C51.409 (3)C16—H160.9300
C4—C141.485 (3)C17—C181.389 (3)
C5—C61.376 (3)C18—C191.375 (3)
C5—H50.9300C18—H180.9300
C6—C71.379 (3)C19—H190.9300
C6—H60.9300C20—H20A0.9600
C8—C91.489 (3)C20—H20B0.9600
C9—C101.504 (3)C20—H20C0.9600
C9—H9A0.9700
C1—S—C20102.15 (11)O2—C11—H11109.7
C7—O1—C8105.56 (18)C12—C11—H11109.7
C10—O2—C11117.84 (17)C13—C11—H11109.7
C17—O4—H4106 (2)C11—C12—H12A109.5
C8—C1—C2106.7 (2)C11—C12—H12B109.5
C8—C1—S124.77 (18)H12A—C12—H12B109.5
C2—C1—S128.29 (18)C11—C12—H12C109.5
C3—C2—C7119.2 (2)H12A—C12—H12C109.5
C3—C2—C1135.7 (2)H12B—C12—H12C109.5
C7—C2—C1105.0 (2)C11—C13—H13A109.5
C2—C3—C4119.5 (2)C11—C13—H13B109.5
C2—C3—H3120.3H13A—C13—H13B109.5
C4—C3—H3120.3C11—C13—H13C109.5
C3—C4—C5118.8 (2)H13A—C13—H13C109.5
C3—C4—C14121.7 (2)H13B—C13—H13C109.5
C5—C4—C14119.53 (19)C19—C14—C15116.8 (2)
C6—C5—C4122.7 (2)C19—C14—C4121.87 (19)
C6—C5—H5118.6C15—C14—C4121.2 (2)
C4—C5—H5118.6C16—C15—C14121.6 (2)
C5—C6—C7116.4 (2)C16—C15—H15119.2
C5—C6—H6121.8C14—C15—H15119.2
C7—C6—H6121.8C17—C16—C15120.4 (2)
O1—C7—C6125.9 (2)C17—C16—H16119.8
O1—C7—C2110.76 (19)C15—C16—H16119.8
C6—C7—C2123.3 (2)O4—C17—C16122.7 (2)
C1—C8—O1112.0 (2)O4—C17—C18118.0 (2)
C1—C8—C9132.3 (2)C16—C17—C18119.2 (2)
O1—C8—C9115.8 (2)C19—C18—C17120.1 (2)
C8—C9—C10112.92 (19)C19—C18—H18119.9
C8—C9—H9A109.0C17—C18—H18119.9
C10—C9—H9A109.0C18—C19—C14121.7 (2)
C8—C9—H9B109.0C18—C19—H19119.2
C10—C9—H9B109.0C14—C19—H19119.2
H9A—C9—H9B107.8S—C20—H20A109.5
O3—C10—O2125.0 (2)S—C20—H20B109.5
O3—C10—C9124.6 (2)H20A—C20—H20B109.5
O2—C10—C9110.39 (19)S—C20—H20C109.5
O2—C11—C12105.5 (2)H20A—C20—H20C109.5
O2—C11—C13107.5 (2)H20B—C20—H20C109.5
C12—C11—C13114.6 (2)
C20—S—C1—C8−113.8 (2)C7—O1—C8—C1−1.1 (2)
C20—S—C1—C272.8 (2)C7—O1—C8—C9179.05 (19)
C8—C1—C2—C3178.3 (2)C1—C8—C9—C10−77.0 (3)
S—C1—C2—C3−7.3 (4)O1—C8—C9—C10102.7 (2)
C8—C1—C2—C7−0.6 (2)C11—O2—C10—O35.8 (4)
S—C1—C2—C7173.76 (17)C11—O2—C10—C9−173.8 (2)
C7—C2—C3—C4−0.5 (3)C8—C9—C10—O3−18.4 (4)
C1—C2—C3—C4−179.3 (2)C8—C9—C10—O2161.2 (2)
C2—C3—C4—C50.5 (3)C10—O2—C11—C12−155.9 (2)
C2—C3—C4—C14178.91 (19)C10—O2—C11—C1381.4 (3)
C3—C4—C5—C6−0.4 (3)C3—C4—C14—C19−33.2 (3)
C14—C4—C5—C6−178.9 (2)C5—C4—C14—C19145.2 (2)
C4—C5—C6—C70.3 (3)C3—C4—C14—C15149.6 (2)
C8—O1—C7—C6−178.9 (2)C5—C4—C14—C15−32.0 (3)
C8—O1—C7—C20.7 (2)C19—C14—C15—C16−2.7 (3)
C5—C6—C7—O1179.3 (2)C4—C14—C15—C16174.6 (2)
C5—C6—C7—C2−0.3 (3)C14—C15—C16—C170.6 (3)
C3—C2—C7—O1−179.24 (18)C15—C16—C17—O4−177.1 (2)
C1—C2—C7—O1−0.1 (2)C15—C16—C17—C182.3 (3)
C3—C2—C7—C60.4 (3)O4—C17—C18—C19176.5 (2)
C1—C2—C7—C6179.5 (2)C16—C17—C18—C19−2.9 (3)
C2—C1—C8—O11.1 (3)C17—C18—C19—C140.7 (3)
S—C1—C8—O1−173.51 (15)C15—C14—C19—C182.1 (3)
C2—C1—C8—C9−179.1 (2)C4—C14—C19—C18−175.23 (19)
S—C1—C8—C96.3 (4)
D—H···AD—HH···AD···AD—H···A
O4—H4···O3i0.81 (3)2.02 (3)2.829 (3)171 (3)
C13—H13B···O4ii0.962.573.325 (3)135
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O3i0.81 (3)2.02 (3)2.829 (3)171 (3)
C13—H13B⋯O4ii0.962.573.325 (3)135

Symmetry codes: (i) ; (ii) .

  4 in total

1.  Inhibition of fibril formation in beta-amyloid peptide by a novel series of benzofurans.

Authors:  D R Howlett; A E Perry; F Godfrey; J E Swatton; K H Jennings; C Spitzfaden; H Wadsworth; S J Wood; R E Markwell
Journal:  Biochem J       Date:  1999-05-15       Impact factor: 3.857

2.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Corsifurans A-C, 2-arylbenzofurans of presumed stilbenoid origin from Corsinia coriandrina (Hepaticae).

Authors:  Stephan H von Reuss; Wilfried A König
Journal:  Phytochemistry       Date:  2004-12       Impact factor: 4.072

  4 in total
  1 in total

1.  Methyl 2-[5-(4-hydroxy-phen-yl)-3-methyl-sulfanyl-1-benzofuran-2-yl]acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-26
  1 in total

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