Literature DB >> 21577657

A second ortho-rhom-bic polymorph of 3,5-diphenyl-4H-1,2,4-triazol-4-amine.

Ya-Wen Zhang, Jian-Quan Wang, Lin Cheng.   

Abstract

The present crystal structure is the second ortho-rhom-bic polymorph of the title compound, C(14)H(12)N(4). Whereas the structure in Pnma with Z' = 0.5 is already known [Ikemi et al. (2002 ▶). Heterocycl. Commun.8, 439-442], the present structure crystallizes in the space group Pbca with Z' = 1. The dihedral angle between the two phenyl rings is 23.5 (4)° and the dihedral angles between central ring and the phenyl rings are 41.0 (3) and 26.3 (5)°. In the 4-amino-1,2,4-trizole fragment, the C=N distances are 1.321 (3) and 1.315 (3) Å, which are much shorter than the C-N distances of 1.367 (3) and 1.357 (3) Å. In the crystal, adjacent mol-ecules are linked by N-H⋯N hydrogen bonds.

Entities:  

Year:  2009        PMID: 21577657      PMCID: PMC2970008          DOI: 10.1107/S1600536809033807

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For 4-amino-1,2,4-triazoles derivatives, see: Beckmann & Brooker (2003 ▶); Collin et al. (2003 ▶). For the other polymorph, see: Ikemi et al. (2002 ▶).

Experimental

Crystal data

C14H12N4 M = 236.28 Orthorhombic, a = 7.5521 (9) Å b = 11.2309 (14) Å c = 28.278 (3) Å V = 2398.4 (5) Å3 Z = 8 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.30 × 0.28 × 0.25 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.976, T max = 0.980 9495 measured reflections 2307 independent reflections 1613 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.161 S = 1.07 2307 reflections 164 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.18 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809033807/bt5044sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033807/bt5044Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12N4F(000) = 992
Mr = 236.28Dx = 1.309 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 1617 reflections
a = 7.5521 (9) Åθ = 2.9–27.7°
b = 11.2309 (14) ŵ = 0.08 mm1
c = 28.278 (3) ÅT = 293 K
V = 2398.4 (5) Å3Block, colorless
Z = 80.30 × 0.28 × 0.25 mm
Bruker SMART CCD diffractometer2307 independent reflections
Radiation source: fine-focus sealed tube1613 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 26.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2000)h = −8→8
Tmin = 0.976, Tmax = 0.980k = −8→13
9495 measured reflectionsl = −34→34
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.056H-atom parameters constrained
wR(F2) = 0.161w = 1/[σ2(Fo2) + (0.075P)2 + 0.3879P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2307 reflectionsΔρmax = 0.16 e Å3
164 parametersΔρmin = −0.18 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0018 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1186 (4)0.1019 (2)0.34391 (9)0.0903 (8)
H1A0.14950.04700.36710.108*
C20.0906 (5)0.0634 (3)0.29855 (10)0.1183 (11)
H2A0.1035−0.01680.29120.142*
C30.0438 (5)0.1425 (5)0.26392 (13)0.1355 (13)
H3A0.02150.11660.23330.163*
C40.0307 (6)0.2600 (4)0.27534 (14)0.1452 (16)
H4A0.00200.31470.25190.174*
C50.0585 (5)0.2991 (3)0.32027 (12)0.1164 (11)
H5A0.04820.37990.32700.140*
C60.1018 (3)0.2208 (2)0.35588 (9)0.0750 (7)
C70.1304 (3)0.26686 (18)0.40343 (9)0.0672 (6)
C80.1462 (2)0.28566 (15)0.48031 (9)0.0646 (6)
C90.1367 (2)0.26276 (16)0.53087 (8)0.0623 (6)
C100.0670 (3)0.35010 (19)0.56046 (10)0.0766 (7)
H10A0.02380.42060.54760.092*
C110.0618 (3)0.3326 (2)0.60841 (11)0.0893 (8)
H11A0.01590.39140.62800.107*
C120.1239 (3)0.2287 (2)0.62747 (10)0.0901 (8)
H12A0.11970.21710.66000.108*
C130.1924 (3)0.1416 (2)0.59877 (10)0.0839 (7)
H13A0.23390.07110.61200.101*
C140.1998 (3)0.15788 (18)0.55063 (9)0.0694 (6)
H14A0.24710.09880.53130.083*
N10.1804 (3)0.37701 (15)0.41296 (9)0.0858 (7)
N20.1900 (3)0.38864 (15)0.46152 (9)0.0816 (6)
N30.1098 (2)0.20701 (13)0.44473 (6)0.0597 (5)
N40.0340 (2)0.09288 (13)0.44985 (6)0.0639 (5)
H4B0.12140.03270.45330.077*
H4C−0.04670.09330.47560.077*
U11U22U33U12U13U23
C10.109 (2)0.0712 (17)0.0906 (18)−0.0055 (14)−0.0115 (14)0.0118 (13)
C20.157 (3)0.103 (2)0.095 (2)−0.014 (2)−0.0136 (18)0.0066 (18)
C30.147 (3)0.166 (4)0.094 (2)0.000 (3)−0.009 (2)0.014 (2)
C40.180 (4)0.142 (4)0.114 (3)0.052 (3)0.017 (2)0.053 (3)
C50.143 (3)0.094 (2)0.112 (2)0.0370 (19)0.033 (2)0.0354 (19)
C60.0566 (13)0.0589 (13)0.1096 (18)0.0088 (10)0.0127 (11)0.0270 (13)
C70.0547 (13)0.0442 (12)0.1026 (17)0.0067 (9)0.0109 (10)0.0087 (11)
C80.0410 (11)0.0299 (10)0.1228 (18)−0.0006 (7)0.0057 (10)−0.0089 (10)
C90.0407 (11)0.0405 (10)0.1057 (16)−0.0069 (8)0.0007 (9)−0.0121 (10)
C100.0526 (13)0.0444 (12)0.133 (2)−0.0024 (9)0.0074 (12)−0.0186 (12)
C110.0712 (16)0.0771 (18)0.120 (2)−0.0073 (13)0.0126 (14)−0.0343 (16)
C120.0805 (18)0.0828 (18)0.1069 (19)−0.0079 (14)0.0000 (13)−0.0208 (15)
C130.0754 (16)0.0659 (15)0.110 (2)−0.0029 (12)−0.0134 (13)−0.0073 (13)
C140.0521 (13)0.0455 (12)0.1107 (19)−0.0004 (9)−0.0064 (11)−0.0167 (11)
N10.0767 (14)0.0379 (10)0.143 (2)−0.0021 (9)0.0250 (12)0.0139 (11)
N20.0750 (14)0.0409 (10)0.1290 (18)−0.0081 (8)0.0187 (11)−0.0036 (10)
N30.0452 (9)0.0324 (8)0.1015 (13)0.0009 (6)0.0045 (8)0.0037 (8)
N40.0606 (11)0.0310 (8)0.1000 (13)−0.0052 (7)0.0100 (8)0.0013 (7)
C1—C21.370 (4)C8—C91.454 (3)
C1—C61.383 (3)C9—C141.388 (3)
C1—H1A0.9300C9—C101.393 (3)
C2—C31.368 (5)C10—C111.371 (4)
C2—H2A0.9300C10—H10A0.9300
C3—C41.362 (5)C11—C121.368 (4)
C3—H3A0.9300C11—H11A0.9300
C4—C51.361 (5)C12—C131.373 (3)
C4—H4A0.9300C12—H12A0.9300
C5—C61.377 (3)C13—C141.375 (3)
C5—H5A0.9300C13—H13A0.9300
C6—C71.457 (3)C14—H14A0.9300
C7—N11.321 (3)N1—N21.381 (3)
C7—N31.356 (3)N3—N41.411 (2)
C8—N21.315 (2)N4—H4B0.9499
C8—N31.367 (3)N4—H4C0.9498
C2—C1—C6121.3 (3)C14—C9—C8121.92 (18)
C2—C1—H1A119.4C10—C9—C8119.0 (2)
C6—C1—H1A119.4C11—C10—C9120.3 (2)
C3—C2—C1120.4 (3)C11—C10—H10A119.9
C3—C2—H2A119.8C9—C10—H10A119.9
C1—C2—H2A119.8C12—C11—C10120.1 (2)
C4—C3—C2118.6 (4)C12—C11—H11A119.9
C4—C3—H3A120.7C10—C11—H11A119.9
C2—C3—H3A120.7C11—C12—C13120.3 (3)
C5—C4—C3121.5 (3)C11—C12—H12A119.9
C5—C4—H4A119.2C13—C12—H12A119.9
C3—C4—H4A119.2C12—C13—C14120.4 (2)
C4—C5—C6120.9 (3)C12—C13—H13A119.8
C4—C5—H5A119.6C14—C13—H13A119.8
C6—C5—H5A119.6C13—C14—C9119.8 (2)
C5—C6—C1117.4 (3)C13—C14—H14A120.1
C5—C6—C7118.9 (3)C9—C14—H14A120.1
C1—C6—C7123.7 (2)C7—N1—N2107.83 (19)
N1—C7—N3108.7 (2)C8—N2—N1107.78 (18)
N1—C7—C6124.3 (2)C7—N3—C8106.89 (17)
N3—C7—C6126.98 (19)C7—N3—N4125.81 (18)
N2—C8—N3108.8 (2)C8—N3—N4126.36 (17)
N2—C8—C9124.41 (19)N3—N4—H4B112.0
N3—C8—C9126.83 (17)N3—N4—H4C109.5
C14—C9—C10119.1 (2)H4B—N4—H4C111.8
D—H···AD—HH···AD···AD—H···A
N4—H4B···N2i0.952.173.117 (2)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H4B⋯N2i0.952.173.117 (2)177

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1,2,4-Triazolo mercapto and aminonitriles as potent antifungal agents.

Authors:  Xavier Collin; Armelle Sauleau; Joël Coulon
Journal:  Bioorg Med Chem Lett       Date:  2003-08-04       Impact factor: 2.823

  2 in total
  2 in total

1.  3,5-Bis(4-hy-droxy-phen-yl)-4H-1,2,4-triazol-4-amine monohydrate.

Authors:  Sidik Silong; Mohamad Zaki Ab Rahman; Mansor Hj Ahmad; Huey Chong Kwong; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-28

2.  3,5-Bis(4-meth-oxy-phen-yl)-4H-1,2,4-triazol-4-amine.

Authors:  Hui Yang; Zhan-Dong Huang; Guang Yang; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-11
  2 in total

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