Literature DB >> 21577610

Diethyl 2-(2-nitro-benzyl-idene)malonate.

S Thenmozhi, S Ranjith, A Subbiahpandi, V Dhayalan, A K Mohanakrishnan.   

Abstract

In the title compound, C(14)H(15)NO(6), the ethoxy-carbonyl groups adopt extended conformations. In the crystal, mol-ecules are linked into centrosymmetric dimers via pairs of C-H⋯O hydrogen bonds with a R(2) (2)(20) motif.

Entities:  

Year:  2009        PMID: 21577610      PMCID: PMC2969968          DOI: 10.1107/S1600536809032668

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological activity of nitro­gen-containing building blocks derived from α-methyl­ene-β-hydr­oxy esters, see: Singh & Batra (2008 ▶); Masson et al. (2007 ▶); Basavaiah et al. (2003 ▶); Youngme et al. (2007 ▶); Ma et al. (2005 ▶); Soldatov et al. (2003 ▶); Hinckley (1969 ▶).

Experimental

Crystal data

C14H15NO6 M = 293.27 Triclinic, a = 7.8410 (2) Å b = 8.5571 (2) Å c = 12.3533 (4) Å α = 80.866 (2)° β = 75.037 (1)° γ = 64.402 (1)° V = 721.10 (3) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.21 × 0.19 × 0.17 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.978, T max = 0.982 19570 measured reflections 4226 independent reflections 3259 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.145 S = 1.06 4226 reflections 192 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809032668/bt5022sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809032668/bt5022Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H15NO6Z = 2
Mr = 293.27F(000) = 308
Triclinic, P1Dx = 1.351 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.8410 (2) ÅCell parameters from 4226 reflections
b = 8.5571 (2) Åθ = 1.7–30.7°
c = 12.3533 (4) ŵ = 0.11 mm1
α = 80.866 (2)°T = 293 K
β = 75.037 (1)°Block, colourless
γ = 64.402 (1)°0.21 × 0.19 × 0.17 mm
V = 721.10 (3) Å3
Bruker Kappa APEXII CCD diffractometer4226 independent reflections
Radiation source: fine-focus sealed tube3259 reflections with I > 2σ(I)
graphiteRint = 0.025
ω scansθmax = 30.2°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −6→11
Tmin = 0.978, Tmax = 0.982k = −11→12
19570 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.145H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0732P)2 + 0.1321P] where P = (Fo2 + 2Fc2)/3
4226 reflections(Δ/σ)max < 0.001
192 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.32734 (17)0.26054 (16)0.00483 (10)0.0324 (3)
C20.4208 (2)0.18112 (18)−0.09512 (11)0.0393 (3)
H20.35300.1563−0.13670.047*
C30.6156 (2)0.1390 (2)−0.13275 (12)0.0445 (3)
H30.68080.0854−0.20020.053*
C40.7138 (2)0.1765 (2)−0.07003 (12)0.0444 (3)
H40.84580.1469−0.09510.053*
C50.61807 (19)0.25790 (18)0.02979 (11)0.0380 (3)
H50.68670.28340.07040.046*
C60.42104 (17)0.30233 (16)0.07069 (10)0.0307 (2)
C70.32275 (18)0.40052 (17)0.17243 (11)0.0335 (3)
H70.20960.49960.16940.040*
C80.38277 (18)0.35895 (16)0.26840 (10)0.0322 (3)
C90.54181 (19)0.18778 (16)0.28991 (10)0.0339 (3)
C100.8427 (2)0.0493 (2)0.34618 (14)0.0517 (4)
H10A0.95760.07090.33600.062*
H10B0.8725−0.04130.29720.062*
C110.7894 (3)−0.0099 (2)0.46438 (15)0.0570 (4)
H11A0.75330.08180.51260.086*
H11B0.8980−0.10920.48400.086*
H11C0.6824−0.04080.47300.086*
C120.27995 (18)0.48151 (17)0.36030 (11)0.0350 (3)
C130.2334 (2)0.51216 (19)0.55376 (11)0.0432 (3)
H13A0.09350.56180.56460.052*
H13B0.27520.60610.54190.052*
C140.2947 (3)0.4002 (2)0.65347 (13)0.0581 (4)
H14A0.24400.31310.66780.087*
H14B0.24620.46970.71740.087*
H14C0.43340.34520.63970.087*
N0.12284 (17)0.29396 (16)0.04462 (12)0.0446 (3)
O10.03150 (19)0.3042 (2)−0.02475 (13)0.0753 (4)
O20.05294 (17)0.30788 (19)0.14427 (11)0.0651 (4)
O30.53708 (18)0.05173 (13)0.28408 (10)0.0536 (3)
O40.17045 (18)0.63004 (14)0.34780 (9)0.0564 (3)
O50.32173 (14)0.40462 (12)0.45770 (8)0.0394 (2)
O60.68593 (13)0.20702 (12)0.31542 (9)0.0417 (2)
U11U22U33U12U13U23
C10.0360 (6)0.0334 (6)0.0324 (6)−0.0158 (5)−0.0140 (5)0.0017 (5)
C20.0546 (8)0.0390 (7)0.0318 (6)−0.0213 (6)−0.0185 (6)−0.0007 (5)
C30.0560 (8)0.0465 (8)0.0301 (7)−0.0220 (7)−0.0034 (6)−0.0068 (6)
C40.0409 (7)0.0516 (8)0.0402 (7)−0.0221 (6)0.0000 (6)−0.0065 (6)
C50.0384 (6)0.0467 (7)0.0357 (7)−0.0220 (6)−0.0098 (5)−0.0037 (6)
C60.0364 (6)0.0320 (6)0.0264 (6)−0.0150 (5)−0.0105 (4)0.0001 (4)
C70.0345 (6)0.0339 (6)0.0331 (6)−0.0130 (5)−0.0095 (5)−0.0037 (5)
C80.0374 (6)0.0303 (6)0.0299 (6)−0.0130 (5)−0.0083 (5)−0.0052 (5)
C90.0445 (6)0.0313 (6)0.0249 (6)−0.0119 (5)−0.0099 (5)−0.0057 (4)
C100.0354 (7)0.0476 (8)0.0584 (10)−0.0017 (6)−0.0121 (6)−0.0072 (7)
C110.0533 (9)0.0496 (9)0.0595 (10)−0.0091 (7)−0.0232 (7)0.0035 (8)
C120.0382 (6)0.0330 (6)0.0333 (6)−0.0120 (5)−0.0089 (5)−0.0059 (5)
C130.0523 (8)0.0386 (7)0.0336 (7)−0.0118 (6)−0.0064 (6)−0.0129 (6)
C140.0844 (12)0.0509 (9)0.0335 (8)−0.0210 (8)−0.0129 (8)−0.0067 (7)
N0.0378 (6)0.0457 (7)0.0561 (8)−0.0183 (5)−0.0164 (5)−0.0047 (6)
O10.0558 (7)0.1031 (11)0.0868 (10)−0.0357 (7)−0.0377 (7)−0.0131 (8)
O20.0455 (6)0.0896 (10)0.0628 (8)−0.0328 (6)0.0022 (5)−0.0185 (7)
O30.0800 (8)0.0325 (5)0.0580 (7)−0.0194 (5)−0.0361 (6)−0.0042 (5)
O40.0665 (7)0.0376 (6)0.0441 (6)0.0029 (5)−0.0168 (5)−0.0086 (5)
O50.0511 (5)0.0328 (5)0.0292 (5)−0.0096 (4)−0.0096 (4)−0.0086 (4)
O60.0364 (5)0.0370 (5)0.0497 (6)−0.0103 (4)−0.0137 (4)−0.0033 (4)
C1—C21.3756 (19)C10—O61.4566 (17)
C1—C61.3991 (16)C10—C111.482 (2)
C1—N1.4615 (17)C10—H10A0.9700
C2—C31.375 (2)C10—H10B0.9700
C2—H20.9300C11—H11A0.9600
C3—C41.377 (2)C11—H11B0.9600
C3—H30.9300C11—H11C0.9600
C4—C51.383 (2)C12—O41.1998 (16)
C4—H40.9300C12—O51.3244 (16)
C5—C61.3917 (17)C13—O51.4512 (16)
C5—H50.9300C13—C141.483 (2)
C6—C71.4680 (17)C13—H13A0.9700
C7—C81.3278 (17)C13—H13B0.9700
C7—H70.9300C14—H14A0.9600
C8—C121.4878 (17)C14—H14B0.9600
C8—C91.4967 (17)C14—H14C0.9600
C9—O31.1947 (16)N—O21.2132 (18)
C9—O61.3283 (16)N—O11.2222 (17)
C2—C1—C6123.07 (12)O6—C10—H10B109.4
C2—C1—N117.21 (11)C11—C10—H10B109.4
C6—C1—N119.66 (12)H10A—C10—H10B108.0
C3—C2—C1119.15 (12)C10—C11—H11A109.5
C3—C2—H2120.4C10—C11—H11B109.5
C1—C2—H2120.4H11A—C11—H11B109.5
C4—C3—C2119.66 (13)C10—C11—H11C109.5
C4—C3—H3120.2H11A—C11—H11C109.5
C2—C3—H3120.2H11B—C11—H11C109.5
C3—C4—C5120.72 (13)O4—C12—O5124.51 (12)
C3—C4—H4119.6O4—C12—C8124.15 (12)
C5—C4—H4119.6O5—C12—C8111.33 (10)
C4—C5—C6121.29 (12)O5—C13—C14107.61 (12)
C4—C5—H5119.4O5—C13—H13A110.2
C6—C5—H5119.4C14—C13—H13A110.2
C5—C6—C1116.11 (11)O5—C13—H13B110.2
C5—C6—C7119.28 (11)C14—C13—H13B110.2
C1—C6—C7124.41 (11)H13A—C13—H13B108.5
C8—C7—C6125.13 (11)C13—C14—H14A109.5
C8—C7—H7117.4C13—C14—H14B109.5
C6—C7—H7117.4H14A—C14—H14B109.5
C7—C8—C12118.91 (11)C13—C14—H14C109.5
C7—C8—C9122.12 (11)H14A—C14—H14C109.5
C12—C8—C9118.84 (10)H14B—C14—H14C109.5
O3—C9—O6125.05 (12)O2—N—O1123.34 (13)
O3—C9—C8123.16 (12)O2—N—C1118.78 (11)
O6—C9—C8111.79 (11)O1—N—C1117.87 (13)
O6—C10—C11111.16 (12)C12—O5—C13116.56 (10)
O6—C10—H10A109.4C9—O6—C10116.65 (11)
C11—C10—H10A109.4
C6—C1—C2—C30.5 (2)C7—C8—C9—O6123.02 (13)
N—C1—C2—C3−176.61 (12)C12—C8—C9—O6−61.15 (15)
C1—C2—C3—C40.1 (2)C7—C8—C12—O4−15.0 (2)
C2—C3—C4—C5−0.7 (2)C9—C8—C12—O4169.01 (14)
C3—C4—C5—C60.8 (2)C7—C8—C12—O5163.66 (12)
C4—C5—C6—C1−0.28 (19)C9—C8—C12—O5−12.30 (16)
C4—C5—C6—C7−175.29 (12)C2—C1—N—O2155.65 (14)
C2—C1—C6—C5−0.36 (19)C6—C1—N—O2−21.53 (19)
N—C1—C6—C5176.64 (11)C2—C1—N—O1−23.42 (19)
C2—C1—C6—C7174.37 (12)C6—C1—N—O1159.40 (14)
N—C1—C6—C7−8.63 (18)O4—C12—O5—C13−2.7 (2)
C5—C6—C7—C8−50.59 (19)C8—C12—O5—C13178.64 (11)
C1—C6—C7—C8134.84 (14)C14—C13—O5—C12178.49 (13)
C6—C7—C8—C12173.32 (11)O3—C9—O6—C10−4.6 (2)
C6—C7—C8—C9−10.8 (2)C8—C9—O6—C10175.61 (11)
C7—C8—C9—O3−56.78 (19)C11—C10—O6—C9−79.96 (17)
C12—C8—C9—O3119.05 (15)
D—H···AD—HH···AD···AD—H···A
C2—H2···O3i0.932.473.1683 (18)132
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O3i0.932.473.1683 (18)132

Symmetry code: (i) .

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