| Literature DB >> 21577560 |
Abstract
The asymmetric unit of the title compound, C(4)H(14)N(2) (2+)·2C(6)H(4)NO(2) (-)·H(2)O, consists of half of a doubly protonated tetra-methyl-enediammonium dication, a pyridine-2-carboxyl-ate anion and half of a solvent water mol-ecule; the dication is located on a centre of inversion and a twofold rotation axis passes through the O atom of the water mol-ecule. The carboxyl-ate group of the anion appears to be delocalized on the basis of the C-O bond lengths. In the crystal structure, the components are linked by inter-molecular N-H⋯O, N-H⋯N and O-H⋯O hydrogen bonds.Entities:
Year: 2009 PMID: 21577560 PMCID: PMC2970077 DOI: 10.1107/S1600536809031493
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H14N22+·2C6H4NO2−·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 1114 reflections |
| θ = 2.9–22.5° | |
| µ = 0.10 mm−1 | |
| β = 113.789 (4)° | Block, colorless |
| 0.27 × 0.21 × 0.16 mm | |
| Bruker SMART 1000 CCD diffractometer | 2298 independent reflections |
| Radiation source: fine-focus sealed tube | 1040 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 6674 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 2298 reflections | (Δ/σ)max < 0.001 |
| 162 parameters | Δρmax = 0.18 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.42900 (8) | 0.4778 (2) | 0.55250 (14) | 0.0629 (6) | |
| O2 | 0.36511 (9) | 0.6362 (3) | 0.61996 (15) | 0.0793 (7) | |
| N1 | 0.31266 (9) | 0.3696 (3) | 0.37672 (16) | 0.0541 (6) | |
| C1 | 0.25453 (15) | 0.3005 (4) | 0.2959 (2) | 0.0663 (8) | |
| H1 | 0.2608 (13) | 0.230 (4) | 0.235 (2) | 0.089 (9)* | |
| C2 | 0.18842 (15) | 0.3185 (4) | 0.2948 (3) | 0.0685 (8) | |
| H2 | 0.1484 (13) | 0.262 (3) | 0.233 (2) | 0.073 (8)* | |
| C3 | 0.18017 (14) | 0.4148 (4) | 0.3778 (3) | 0.0646 (8) | |
| H3 | 0.1342 (14) | 0.439 (3) | 0.380 (2) | 0.085 (9)* | |
| C4 | 0.23908 (13) | 0.4901 (4) | 0.4606 (2) | 0.0547 (7) | |
| H4 | 0.2350 (11) | 0.556 (3) | 0.517 (2) | 0.055 (7)* | |
| C5 | 0.30461 (11) | 0.4623 (3) | 0.45825 (18) | 0.0429 (6) | |
| C6 | 0.37158 (13) | 0.5323 (3) | 0.5513 (2) | 0.0483 (6) | |
| N2 | 0.05485 (12) | 0.8325 (3) | 0.15154 (19) | 0.0463 (5) | |
| H2A | 0.0797 (12) | 0.853 (3) | 0.234 (2) | 0.072 (8)* | |
| H2B | 0.0116 (14) | 0.898 (3) | 0.121 (2) | 0.070 (8)* | |
| H2C | 0.0864 (14) | 0.863 (4) | 0.117 (2) | 0.091 (10)* | |
| C7 | 0.00642 (18) | 0.5974 (3) | 0.0102 (2) | 0.0599 (8) | |
| H7A | −0.0362 (16) | 0.665 (4) | −0.025 (3) | 0.106 (11)* | |
| H7B | 0.0374 (16) | 0.642 (4) | −0.025 (3) | 0.116 (12)* | |
| C8 | 0.04043 (18) | 0.6425 (4) | 0.1318 (2) | 0.0612 (8) | |
| H8A | 0.0144 (16) | 0.604 (4) | 0.173 (3) | 0.113 (13)* | |
| H8B | 0.0889 (17) | 0.577 (4) | 0.175 (3) | 0.127 (13)* | |
| O3 | 0.0000 | 0.2467 (4) | 0.2500 | 0.0872 (10) | |
| H3O | 0.018 (2) | 0.173 (5) | 0.311 (3) | 0.176 (18)* |
| O1 | 0.0443 (9) | 0.0705 (12) | 0.0630 (12) | −0.0030 (9) | 0.0102 (8) | −0.0125 (9) |
| O2 | 0.0782 (13) | 0.0863 (15) | 0.0542 (12) | 0.0161 (11) | 0.0066 (10) | −0.0263 (11) |
| N1 | 0.0472 (12) | 0.0625 (14) | 0.0459 (12) | −0.0017 (10) | 0.0117 (10) | −0.0095 (10) |
| C1 | 0.0599 (18) | 0.0692 (19) | 0.0532 (17) | −0.0025 (15) | 0.0056 (14) | −0.0149 (14) |
| C2 | 0.0483 (17) | 0.0638 (19) | 0.068 (2) | −0.0074 (14) | −0.0032 (14) | 0.0020 (15) |
| C3 | 0.0429 (16) | 0.073 (2) | 0.071 (2) | 0.0037 (14) | 0.0156 (15) | 0.0136 (16) |
| C4 | 0.0538 (16) | 0.0597 (18) | 0.0500 (16) | 0.0119 (13) | 0.0202 (13) | 0.0062 (13) |
| C5 | 0.0462 (13) | 0.0407 (13) | 0.0368 (13) | 0.0041 (11) | 0.0116 (10) | 0.0035 (10) |
| C6 | 0.0527 (14) | 0.0423 (14) | 0.0412 (14) | 0.0048 (12) | 0.0097 (12) | 0.0015 (11) |
| N2 | 0.0456 (12) | 0.0466 (13) | 0.0425 (13) | 0.0015 (10) | 0.0134 (11) | −0.0049 (10) |
| C7 | 0.082 (2) | 0.0495 (16) | 0.0436 (15) | −0.0082 (16) | 0.0205 (15) | −0.0045 (12) |
| C8 | 0.089 (2) | 0.0471 (17) | 0.0409 (15) | −0.0074 (15) | 0.0191 (15) | −0.0047 (12) |
| O3 | 0.108 (2) | 0.072 (2) | 0.063 (2) | 0.000 | 0.0152 (18) | 0.000 |
| O1—C6 | 1.251 (3) | C5—C6 | 1.517 (3) |
| O2—C6 | 1.235 (3) | N2—C8 | 1.479 (3) |
| N1—C5 | 1.332 (3) | N2—H2A | 0.99 (3) |
| N1—C1 | 1.341 (3) | N2—H2B | 0.96 (3) |
| C1—C2 | 1.367 (4) | N2—H2C | 0.95 (3) |
| C1—H1 | 1.01 (3) | C7—C8 | 1.478 (3) |
| C2—C3 | 1.364 (4) | C7—C7i | 1.512 (5) |
| C2—H2 | 0.98 (2) | C7—H7A | 0.96 (3) |
| C3—C4 | 1.380 (4) | C7—H7B | 0.98 (3) |
| C3—H3 | 0.98 (3) | C8—H8A | 0.95 (3) |
| C4—C5 | 1.383 (3) | C8—H8B | 1.05 (3) |
| C4—H4 | 0.91 (2) | O3—H3O | 0.92 (4) |
| C5—N1—C1 | 117.7 (2) | C8—N2—H2A | 108.6 (15) |
| N1—C1—C2 | 123.1 (3) | C8—N2—H2B | 110.4 (14) |
| N1—C1—H1 | 117.5 (15) | H2A—N2—H2B | 111 (2) |
| C2—C1—H1 | 119.4 (15) | C8—N2—H2C | 106.6 (17) |
| C3—C2—C1 | 119.1 (3) | H2A—N2—H2C | 108 (2) |
| C3—C2—H2 | 122.5 (15) | H2B—N2—H2C | 112 (2) |
| C1—C2—H2 | 118.4 (15) | C8—C7—C7i | 112.8 (3) |
| C2—C3—C4 | 118.8 (3) | C8—C7—H7A | 109.3 (19) |
| C2—C3—H3 | 123.6 (16) | C7i—C7—H7A | 112.5 (19) |
| C4—C3—H3 | 117.5 (16) | C8—C7—H7B | 106.8 (19) |
| C3—C4—C5 | 119.0 (3) | C7i—C7—H7B | 111.1 (19) |
| C3—C4—H4 | 120.6 (14) | H7A—C7—H7B | 104 (2) |
| C5—C4—H4 | 120.4 (14) | C7—C8—N2 | 112.7 (2) |
| N1—C5—C4 | 122.3 (2) | C7—C8—H8A | 113.3 (19) |
| N1—C5—C6 | 116.6 (2) | N2—C8—H8A | 108.9 (19) |
| C4—C5—C6 | 121.1 (2) | C7—C8—H8B | 113.5 (17) |
| O2—C6—O1 | 125.5 (2) | N2—C8—H8B | 106.6 (17) |
| O2—C6—C5 | 117.7 (2) | H8A—C8—H8B | 101 (3) |
| O1—C6—C5 | 116.8 (2) | ||
| C5—N1—C1—C2 | −1.1 (4) | C3—C4—C5—C6 | −176.1 (2) |
| N1—C1—C2—C3 | 1.7 (5) | N1—C5—C6—O2 | 171.3 (2) |
| C1—C2—C3—C4 | −0.4 (4) | C4—C5—C6—O2 | −10.4 (3) |
| C2—C3—C4—C5 | −1.4 (4) | N1—C5—C6—O1 | −9.5 (3) |
| C1—N1—C5—C4 | −0.8 (4) | C4—C5—C6—O1 | 168.8 (2) |
| C1—N1—C5—C6 | 177.5 (2) | C7i—C7—C8—N2 | 178.3 (3) |
| C3—C4—C5—N1 | 2.1 (4) |
| H··· | ||||
| N2—H2A···O2ii | 0.99 (3) | 1.77 (3) | 2.749 (3) | 170 (2) |
| N2—H2B···O1iii | 0.96 (3) | 1.84 (3) | 2.792 (3) | 176 (2) |
| N2—H2C···O1iv | 0.95 (3) | 2.26 (3) | 2.997 (3) | 134 (2) |
| N2—H2C···N1iv | 0.95 (3) | 2.06 (3) | 2.917 (3) | 149 (2) |
| O3—H3O···O1v | 0.92 (4) | 2.02 (4) | 2.926 (3) | 172 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.99 (3) | 1.77 (3) | 2.749 (3) | 170 (2) |
| N2—H2 | 0.96 (3) | 1.84 (3) | 2.792 (3) | 176 (2) |
| N2—H2 | 0.95 (3) | 2.26 (3) | 2.997 (3) | 134 (2) |
| N2—H2 | 0.95 (3) | 2.06 (3) | 2.917 (3) | 149 (2) |
| O3—H3 | 0.92 (4) | 2.02 (4) | 2.926 (3) | 172 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .