| Literature DB >> 21577554 |
Ming-Jian Li1, Chang-Jun Feng.
Abstract
The title compound, C(14)H(11)ClN(2)O, was synthesized by the reaction of 2-chloro-benzaldehyde and 2-amino-benzamide in an ionic liquid. The pyrimidine ring adopts a skew-boat conformation and the two benzene rings make a dihedral angle of 87.1 (1)°. In the crystal, N-H⋯O and C-H⋯N hydrogen bonding links the mol-ecules along b.Entities:
Year: 2009 PMID: 21577554 PMCID: PMC2970036 DOI: 10.1107/S1600536809031328
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H11ClN2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point = 485–486 K |
| Mo | |
| Cell parameters from 5614 reflections | |
| θ = 2.4–27.3° | |
| α = 100.639 (1)° | µ = 0.30 mm−1 |
| β = 92.726 (1)° | |
| γ = 101.786 (1)° | Block, colourless |
| 0.47 × 0.15 × 0.15 mm |
| Bruker SMART CCD area-detector diffractometer | 2204 independent reflections |
| Radiation source: fine-focus sealed tube | 2029 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.2°, θmin = 2.0° |
| Absorption correction: multi-scan (Jacobson, 1998) | |
| 8018 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2204 reflections | Δρmax = 0.20 e Å−3 |
| 176 parameters | Δρmin = −0.19 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.028 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.16029 (5) | 0.69778 (5) | 0.05650 (4) | 0.05390 (17) | |
| N2 | 0.50252 (18) | 1.00296 (13) | 0.18929 (11) | 0.0344 (3) | |
| C9 | 0.53903 (19) | 0.72253 (15) | 0.14393 (12) | 0.0301 (3) | |
| O1 | 1.08313 (14) | 1.09067 (13) | 0.17031 (11) | 0.0497 (3) | |
| C2 | 0.9066 (2) | 1.04662 (16) | 0.18541 (14) | 0.0370 (3) | |
| C8 | 0.61534 (19) | 1.08206 (15) | 0.30290 (12) | 0.0319 (3) | |
| N1 | 0.78205 (17) | 0.94682 (14) | 0.09040 (12) | 0.0367 (3) | |
| C14 | 0.3498 (2) | 0.62845 (16) | 0.12560 (13) | 0.0345 (3) | |
| C1 | 0.57649 (19) | 0.88323 (15) | 0.10227 (13) | 0.0315 (3) | |
| C10 | 0.6833 (2) | 0.66331 (18) | 0.20113 (14) | 0.0411 (3) | |
| H10A | 0.8115 | 0.7230 | 0.2153 | 0.049* | |
| C13 | 0.3048 (2) | 0.48197 (17) | 0.16089 (15) | 0.0451 (4) | |
| H13A | 0.1769 | 0.4217 | 0.1469 | 0.054* | |
| C3 | 0.8198 (2) | 1.10531 (17) | 0.30508 (13) | 0.0384 (3) | |
| C7 | 0.5326 (2) | 1.14921 (18) | 0.41197 (14) | 0.0419 (3) | |
| H7A | 0.3970 | 1.1339 | 0.4120 | 0.050* | |
| C11 | 0.6398 (3) | 0.5163 (2) | 0.23777 (16) | 0.0521 (4) | |
| H11A | 0.7385 | 0.4786 | 0.2765 | 0.063* | |
| C4 | 0.9362 (2) | 1.1958 (2) | 0.41504 (17) | 0.0613 (5) | |
| H4A | 1.0720 | 1.2122 | 0.4163 | 0.074* | |
| C12 | 0.4514 (3) | 0.42650 (18) | 0.21692 (16) | 0.0517 (4) | |
| H12A | 0.4232 | 0.3277 | 0.2409 | 0.062* | |
| C6 | 0.6509 (3) | 1.2379 (2) | 0.51937 (16) | 0.0582 (5) | |
| H6A | 0.5944 | 1.2828 | 0.5916 | 0.070* | |
| C5 | 0.8526 (3) | 1.2615 (3) | 0.52208 (17) | 0.0722 (6) | |
| H5A | 0.9312 | 1.3214 | 0.5957 | 0.087* | |
| H2A | 0.382 (2) | 0.9860 (18) | 0.1921 (14) | 0.037 (4)* | |
| H1A | 0.823 (2) | 0.9236 (19) | 0.0184 (18) | 0.045 (4)* | |
| H1B | 0.510 (2) | 0.8682 (16) | 0.0185 (14) | 0.027 (3)* |
| Cl1 | 0.0326 (2) | 0.0464 (2) | 0.0788 (3) | 0.00346 (16) | −0.01097 (18) | 0.01200 (19) |
| N2 | 0.0259 (6) | 0.0347 (6) | 0.0423 (7) | 0.0069 (5) | 0.0038 (5) | 0.0067 (5) |
| C9 | 0.0304 (7) | 0.0324 (6) | 0.0270 (6) | 0.0067 (5) | 0.0065 (5) | 0.0041 (5) |
| O1 | 0.0298 (5) | 0.0554 (7) | 0.0566 (7) | −0.0007 (5) | 0.0140 (5) | 0.0007 (5) |
| C2 | 0.0310 (7) | 0.0380 (7) | 0.0418 (8) | 0.0051 (6) | 0.0087 (6) | 0.0084 (6) |
| C8 | 0.0330 (7) | 0.0308 (6) | 0.0347 (7) | 0.0076 (5) | 0.0059 (5) | 0.0119 (5) |
| N1 | 0.0338 (6) | 0.0396 (6) | 0.0339 (6) | 0.0012 (5) | 0.0126 (5) | 0.0050 (5) |
| C14 | 0.0329 (7) | 0.0334 (7) | 0.0350 (7) | 0.0055 (6) | 0.0015 (5) | 0.0034 (5) |
| C1 | 0.0292 (7) | 0.0347 (7) | 0.0298 (7) | 0.0041 (5) | 0.0032 (5) | 0.0073 (5) |
| C10 | 0.0342 (8) | 0.0447 (8) | 0.0456 (8) | 0.0101 (6) | 0.0034 (6) | 0.0105 (6) |
| C13 | 0.0473 (9) | 0.0339 (7) | 0.0481 (9) | −0.0027 (6) | 0.0017 (7) | 0.0063 (6) |
| C3 | 0.0327 (7) | 0.0448 (8) | 0.0368 (7) | 0.0081 (6) | 0.0049 (6) | 0.0060 (6) |
| C7 | 0.0395 (8) | 0.0473 (8) | 0.0431 (8) | 0.0148 (6) | 0.0130 (6) | 0.0118 (6) |
| C11 | 0.0576 (10) | 0.0484 (9) | 0.0569 (10) | 0.0218 (8) | −0.0019 (8) | 0.0175 (7) |
| C4 | 0.0382 (9) | 0.0858 (13) | 0.0502 (10) | 0.0114 (9) | −0.0030 (7) | −0.0067 (9) |
| C12 | 0.0676 (11) | 0.0326 (7) | 0.0546 (9) | 0.0063 (7) | 0.0013 (8) | 0.0139 (7) |
| C6 | 0.0641 (11) | 0.0729 (12) | 0.0372 (8) | 0.0220 (9) | 0.0126 (7) | 0.0002 (8) |
| C5 | 0.0615 (12) | 0.0989 (15) | 0.0431 (10) | 0.0171 (11) | −0.0070 (8) | −0.0161 (9) |
| Cl1—C14 | 1.7453 (14) | C10—C11 | 1.388 (2) |
| N2—C8 | 1.3787 (17) | C10—H10A | 0.9300 |
| N2—C1 | 1.4523 (17) | C13—C12 | 1.372 (2) |
| N2—H2A | 0.831 (16) | C13—H13A | 0.9300 |
| C9—C10 | 1.3839 (19) | C3—C4 | 1.388 (2) |
| C9—C14 | 1.3915 (19) | C7—C6 | 1.371 (2) |
| C9—C1 | 1.5240 (18) | C7—H7A | 0.9300 |
| O1—C2 | 1.2421 (17) | C11—C12 | 1.373 (2) |
| C2—N1 | 1.3405 (18) | C11—H11A | 0.9300 |
| C2—C3 | 1.4716 (19) | C4—C5 | 1.375 (2) |
| C8—C7 | 1.3924 (19) | C4—H4A | 0.9300 |
| C8—C3 | 1.4001 (19) | C12—H12A | 0.9300 |
| N1—C1 | 1.4511 (17) | C6—C5 | 1.380 (3) |
| N1—H1A | 0.824 (18) | C6—H6A | 0.9300 |
| C14—C13 | 1.378 (2) | C5—H5A | 0.9300 |
| C1—H1B | 0.948 (14) | ||
| C8—N2—C1 | 118.48 (11) | C11—C10—H10A | 119.5 |
| C8—N2—H2A | 116.8 (10) | C12—C13—C14 | 118.97 (14) |
| C1—N2—H2A | 116.0 (10) | C12—C13—H13A | 120.5 |
| C10—C9—C14 | 116.97 (12) | C14—C13—H13A | 120.5 |
| C10—C9—C1 | 123.74 (12) | C4—C3—C8 | 119.58 (13) |
| C14—C9—C1 | 119.28 (11) | C4—C3—C2 | 121.32 (14) |
| O1—C2—N1 | 121.40 (13) | C8—C3—C2 | 118.80 (12) |
| O1—C2—C3 | 122.54 (13) | C6—C7—C8 | 120.05 (14) |
| N1—C2—C3 | 116.00 (12) | C6—C7—H7A | 120.0 |
| N2—C8—C7 | 121.83 (12) | C8—C7—H7A | 120.0 |
| N2—C8—C3 | 118.83 (12) | C12—C11—C10 | 120.13 (14) |
| C7—C8—C3 | 119.18 (13) | C12—C11—H11A | 119.9 |
| C2—N1—C1 | 124.90 (12) | C10—C11—H11A | 119.9 |
| C2—N1—H1A | 117.9 (12) | C5—C4—C3 | 120.63 (16) |
| C1—N1—H1A | 117.1 (12) | C5—C4—H4A | 119.7 |
| C13—C14—C9 | 122.57 (13) | C3—C4—H4A | 119.7 |
| C13—C14—Cl1 | 118.17 (11) | C13—C12—C11 | 120.28 (14) |
| C9—C14—Cl1 | 119.26 (10) | C13—C12—H12A | 119.9 |
| N1—C1—N2 | 108.17 (11) | C11—C12—H12A | 119.9 |
| N1—C1—C9 | 113.41 (11) | C7—C6—C5 | 121.06 (15) |
| N2—C1—C9 | 112.80 (10) | C7—C6—H6A | 119.5 |
| N1—C1—H1B | 106.9 (8) | C5—C6—H6A | 119.5 |
| N2—C1—H1B | 107.8 (8) | C4—C5—C6 | 119.49 (16) |
| C9—C1—H1B | 107.5 (8) | C4—C5—H5A | 120.3 |
| C9—C10—C11 | 121.08 (14) | C6—C5—H5A | 120.3 |
| C9—C10—H10A | 119.5 | ||
| C1—N2—C8—C7 | −154.80 (12) | Cl1—C14—C13—C12 | −179.15 (12) |
| C1—N2—C8—C3 | 29.94 (17) | N2—C8—C3—C4 | 174.78 (14) |
| O1—C2—N1—C1 | 176.67 (13) | C7—C8—C3—C4 | −0.6 (2) |
| C3—C2—N1—C1 | −5.9 (2) | N2—C8—C3—C2 | 0.93 (19) |
| C10—C9—C14—C13 | −0.6 (2) | C7—C8—C3—C2 | −174.45 (13) |
| C1—C9—C14—C13 | −179.95 (12) | O1—C2—C3—C4 | −9.3 (2) |
| C10—C9—C14—Cl1 | 178.92 (10) | N1—C2—C3—C4 | 173.25 (15) |
| C1—C9—C14—Cl1 | −0.48 (16) | O1—C2—C3—C8 | 164.39 (14) |
| C2—N1—C1—N2 | 33.01 (17) | N1—C2—C3—C8 | −13.0 (2) |
| C2—N1—C1—C9 | −92.90 (15) | N2—C8—C7—C6 | −174.73 (14) |
| C8—N2—C1—N1 | −44.49 (15) | C3—C8—C7—C6 | 0.5 (2) |
| C8—N2—C1—C9 | 81.78 (14) | C9—C10—C11—C12 | 0.3 (2) |
| C10—C9—C1—N1 | 17.84 (18) | C8—C3—C4—C5 | 0.6 (3) |
| C14—C9—C1—N1 | −162.81 (11) | C2—C3—C4—C5 | 174.27 (18) |
| C10—C9—C1—N2 | −105.57 (14) | C14—C13—C12—C11 | 0.3 (2) |
| C14—C9—C1—N2 | 73.78 (15) | C10—C11—C12—C13 | −0.6 (3) |
| C14—C9—C10—C11 | 0.2 (2) | C8—C7—C6—C5 | −0.4 (3) |
| C1—C9—C10—C11 | 179.58 (13) | C3—C4—C5—C6 | −0.5 (3) |
| C9—C14—C13—C12 | 0.3 (2) | C7—C6—C5—C4 | 0.4 (3) |
| H··· | ||||
| N2—H2A···O1i | 0.831 (16) | 2.461 (16) | 3.1847 (16) | 146.2 (14) |
| N1—H1A···O1ii | 0.824 (18) | 2.103 (18) | 2.9146 (16) | 168.4 (16) |
| C1—H1B···N2iii | 0.948 (14) | 2.635 (14) | 3.4369 (17) | 142.6 (11) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.831 (16) | 2.461 (16) | 3.1847 (16) | 146.2 (14) |
| N1—H1 | 0.824 (18) | 2.103 (18) | 2.9146 (16) | 168.4 (16) |
| C1—H1 | 0.948 (14) | 2.635 (14) | 3.4369 (17) | 142.6 (11) |
Symmetry codes: (i) ; (ii) ; (iii) .