| Literature DB >> 21577542 |
Lingyun Du1, Lei Du, Shuhao Wang.
Abstract
The mol-ecular skeleton of the title mol-ecule, C(9)H(11)ClN(4)O, is essentially planar, the dihedral angle between the ring and the and N/N/C plane being 6.7 (3)°. In the crystal, inter-molecular N-H⋯O and N-H⋯N hydrogen bonds link the mol-ecules into ribbons propagated along [010].Entities:
Year: 2009 PMID: 21577542 PMCID: PMC2969952 DOI: 10.1107/S1600536809030384
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11ClN4O | |
| Monoclinic, | Mo |
| Cell parameters from 963 reflections | |
| θ = 2.5–22.7° | |
| µ = 0.34 mm−1 | |
| β = 90.102 (1)° | |
| Needle, colourless | |
| 0.40 × 0.30 × 0.12 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 1837 independent reflections |
| Radiation source: fine-focus sealed tube | 1085 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 1.4° |
| Absorption correction: multi-scan ( | |
| 4419 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1837 reflections | (Δ/σ)max = 0.002 |
| 137 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.94869 (7) | 1.35122 (11) | 0.60169 (13) | 0.0725 (4) | |
| N1 | 0.57886 (16) | 0.7625 (2) | 0.3769 (3) | 0.0405 (7) | |
| H1 | 0.5945 | 0.6791 | 0.4057 | 0.049* | |
| N2 | 0.63579 (17) | 0.8715 (2) | 0.4127 (3) | 0.0375 (6) | |
| N3 | 0.47946 (16) | 0.9177 (2) | 0.2451 (3) | 0.0429 (7) | |
| H3 | 0.5175 | 0.9828 | 0.2719 | 0.051* | |
| N4 | 0.39947 (16) | 0.9500 (2) | 0.1494 (3) | 0.0434 (7) | |
| H4A | 0.4001 | 0.9058 | 0.0443 | 0.065* | |
| H4B | 0.3513 | 0.9224 | 0.2129 | 0.065* | |
| O1 | 0.44329 (14) | 0.6900 (2) | 0.2677 (3) | 0.0460 (6) | |
| C1 | 0.4970 (2) | 0.7867 (3) | 0.2949 (4) | 0.0358 (7) | |
| C2 | 0.7519 (2) | 0.7025 (3) | 0.5085 (4) | 0.0518 (9) | |
| H2A | 0.7062 | 0.6479 | 0.5682 | 0.078* | |
| H2B | 0.8056 | 0.7075 | 0.5825 | 0.078* | |
| H2C | 0.7669 | 0.6601 | 0.3955 | 0.078* | |
| C3 | 0.7158 (2) | 0.8469 (3) | 0.4762 (4) | 0.0357 (7) | |
| C4 | 0.77306 (19) | 0.9705 (3) | 0.5105 (4) | 0.0353 (7) | |
| C5 | 0.8596 (2) | 0.9605 (3) | 0.5861 (4) | 0.0458 (8) | |
| H5 | 0.8821 | 0.8733 | 0.6173 | 0.055* | |
| C6 | 0.9131 (2) | 1.0768 (4) | 0.6161 (4) | 0.0511 (9) | |
| H6 | 0.9710 | 1.0676 | 0.6663 | 0.061* | |
| C7 | 0.8802 (2) | 1.2056 (3) | 0.5714 (4) | 0.0443 (8) | |
| C8 | 0.7950 (2) | 1.2196 (4) | 0.4976 (4) | 0.0513 (9) | |
| H8 | 0.7729 | 1.3074 | 0.4678 | 0.062* | |
| C9 | 0.7423 (2) | 1.1031 (3) | 0.4676 (4) | 0.0475 (9) | |
| H9 | 0.6845 | 1.1136 | 0.4173 | 0.057* |
| Cl1 | 0.0749 (7) | 0.0666 (7) | 0.0758 (7) | −0.0359 (5) | −0.0187 (5) | 0.0017 (5) |
| N1 | 0.0364 (16) | 0.0234 (14) | 0.0618 (18) | 0.0002 (12) | −0.0087 (13) | 0.0031 (12) |
| N2 | 0.0367 (15) | 0.0287 (15) | 0.0471 (15) | −0.0058 (12) | −0.0022 (12) | −0.0013 (11) |
| N3 | 0.0377 (16) | 0.0238 (15) | 0.0671 (18) | −0.0020 (12) | −0.0125 (13) | 0.0000 (12) |
| N4 | 0.0361 (15) | 0.0335 (15) | 0.0605 (17) | 0.0027 (12) | −0.0060 (12) | 0.0004 (12) |
| O1 | 0.0397 (13) | 0.0231 (12) | 0.0753 (16) | −0.0055 (10) | −0.0085 (11) | 0.0006 (10) |
| C1 | 0.0372 (19) | 0.0216 (18) | 0.0488 (19) | 0.0004 (14) | 0.0016 (15) | −0.0018 (14) |
| C2 | 0.055 (2) | 0.043 (2) | 0.058 (2) | 0.0051 (18) | −0.0117 (17) | −0.0020 (16) |
| C3 | 0.0360 (19) | 0.0370 (18) | 0.0342 (16) | 0.0020 (15) | −0.0013 (14) | −0.0022 (14) |
| C4 | 0.0332 (18) | 0.0379 (19) | 0.0349 (17) | −0.0019 (14) | −0.0016 (14) | −0.0011 (14) |
| C5 | 0.042 (2) | 0.044 (2) | 0.051 (2) | −0.0002 (17) | −0.0057 (16) | 0.0064 (16) |
| C6 | 0.041 (2) | 0.061 (3) | 0.052 (2) | −0.0070 (19) | −0.0125 (16) | 0.0029 (18) |
| C7 | 0.045 (2) | 0.045 (2) | 0.0431 (19) | −0.0125 (17) | −0.0041 (16) | −0.0033 (15) |
| C8 | 0.052 (2) | 0.037 (2) | 0.065 (2) | −0.0075 (17) | −0.0142 (18) | 0.0026 (16) |
| C9 | 0.0366 (19) | 0.042 (2) | 0.064 (2) | −0.0034 (16) | −0.0142 (16) | 0.0021 (17) |
| Cl1—C7 | 1.735 (3) | C2—H2B | 0.9600 |
| N1—C1 | 1.364 (4) | C2—H2C | 0.9600 |
| N1—N2 | 1.364 (3) | C3—C4 | 1.476 (4) |
| N1—H1 | 0.8600 | C4—C5 | 1.388 (4) |
| N2—C3 | 1.285 (4) | C4—C9 | 1.387 (4) |
| N3—C1 | 1.336 (3) | C5—C6 | 1.382 (4) |
| N3—N4 | 1.404 (3) | C5—H5 | 0.9300 |
| N3—H3 | 0.8600 | C6—C7 | 1.368 (4) |
| N4—H4A | 0.8900 | C6—H6 | 0.9300 |
| N4—H4B | 0.8900 | C7—C8 | 1.369 (4) |
| O1—C1 | 1.234 (3) | C8—C9 | 1.378 (4) |
| C2—C3 | 1.502 (4) | C8—H8 | 0.9300 |
| C2—H2A | 0.9600 | C9—H9 | 0.9300 |
| C1—N1—N2 | 119.5 (2) | N2—C3—C2 | 123.3 (3) |
| C1—N1—H1 | 120.2 | C4—C3—C2 | 121.1 (3) |
| N2—N1—H1 | 120.3 | C5—C4—C9 | 116.9 (3) |
| C3—N2—N1 | 119.1 (2) | C5—C4—C3 | 122.1 (3) |
| C1—N3—N4 | 120.5 (2) | C9—C4—C3 | 121.0 (3) |
| C1—N3—H3 | 119.7 | C6—C5—C4 | 121.7 (3) |
| N4—N3—H3 | 119.7 | C6—C5—H5 | 119.1 |
| N3—N4—H4A | 109.2 | C4—C5—H5 | 119.1 |
| N3—N4—H4B | 109.1 | C7—C6—C5 | 119.5 (3) |
| H4A—N4—H4B | 109.5 | C7—C6—H6 | 120.2 |
| O1—C1—N3 | 122.8 (3) | C5—C6—H6 | 120.2 |
| O1—C1—N1 | 120.3 (3) | C6—C7—C8 | 120.4 (3) |
| N3—C1—N1 | 116.9 (3) | C6—C7—Cl1 | 119.6 (2) |
| C3—C2—H2A | 109.5 | C8—C7—Cl1 | 119.9 (3) |
| C3—C2—H2B | 109.5 | C7—C8—C9 | 119.7 (3) |
| H2A—C2—H2B | 109.5 | C7—C8—H8 | 120.2 |
| C3—C2—H2C | 109.5 | C9—C8—H8 | 120.2 |
| H2A—C2—H2C | 109.5 | C8—C9—C4 | 121.8 (3) |
| H2B—C2—H2C | 109.5 | C8—C9—H9 | 119.1 |
| N2—C3—C4 | 115.6 (3) | C4—C9—H9 | 119.1 |
| H··· | ||||
| N1—H1···N4i | 0.86 | 2.24 | 3.024 (3) | 152 |
| N3—H3···O1ii | 0.86 | 2.09 | 2.850 (3) | 147 |
| N4—H4A···O1iii | 0.89 | 2.34 | 3.206 (3) | 164 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯N4i | 0.86 | 2.24 | 3.024 (3) | 152 |
| N3—H3⋯O1ii | 0.86 | 2.09 | 2.850 (3) | 147 |
| N4—H4 | 0.89 | 2.34 | 3.206 (3) | 164 |
Symmetry codes: (i) ; (ii) ; (iii) .