Literature DB >> 21577494

(1Z)-1-(2,4-Dichloro-phen-yl)ethan-1-one semicarbazone.

Hoong-Kun Fun, Kasthuri Balasubramani, A M Vijesh, Shridhar Malladii, Arun M Isloor.   

Abstract

In the title compound, C(9)H(9)Cl(2)N(3)O, the semicarbazone group is approximately planar, with an r.m.s deviation from the mean plane of 0.011 (2) Å. The dihedral angle between the least-squares planes through the semicarbazone group and the benzene ring is 38.76 (9)°. The crystal structure is further stabilized by N-H⋯O and C-H⋯O hydrogen bonding.

Entities:  

Year:  2009        PMID: 21577494      PMCID: PMC2969861          DOI: 10.1107/S1600536809029900

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of semicarbazone derivatives, see: Warren et al. (1977 ▶); Chandra & Gupta (2005 ▶); Jain et al. (2002 ▶); Pilgram (1978 ▶); Yogeeswari et al. (2004 ▶); For semicarbazide preparations, see: Furniss et al. (1978 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C9H9Cl2N3O M = 246.09 Monoclinic, a = 37.8079 (17) Å b = 3.8097 (2) Å c = 14.4920 (7) Å β = 98.852 (2)° V = 2062.52 (17) Å3 Z = 8 Mo Kα radiation μ = 0.60 mm−1 T = 100 K 0.42 × 0.14 × 0.04 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.707, T max = 0.974 32124 measured reflections 4202 independent reflections 3654 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.072 wR(F 2) = 0.192 S = 1.11 4202 reflections 149 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 3.37 e Å−3 Δρmin = −0.82 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809029900/bq2153sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809029900/bq2153Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H9Cl2N3OF(000) = 1008
Mr = 246.09Dx = 1.585 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 9961 reflections
a = 37.8079 (17) Åθ = 2.9–34.0°
b = 3.8097 (2) ŵ = 0.60 mm1
c = 14.4920 (7) ÅT = 100 K
β = 98.852 (2)°Plate, colorless
V = 2062.52 (17) Å30.42 × 0.14 × 0.04 mm
Z = 8
Bruker SMART APEXII CCD area-detector diffractometer4202 independent reflections
Radiation source: fine-focus sealed tube3654 reflections with I > 2σ(I)
graphiteRint = 0.037
φ and ω scansθmax = 34.1°, θmin = 1.1°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −59→58
Tmin = 0.707, Tmax = 0.974k = −5→5
32124 measured reflectionsl = −22→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.072Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.192H atoms treated by a mixture of independent and constrained refinement
S = 1.11w = 1/[σ2(Fo2) + (0.1176P)2 + 5.115P] where P = (Fo2 + 2Fc2)/3
4202 reflections(Δ/σ)max = 0.001
149 parametersΔρmax = 3.37 e Å3
0 restraintsΔρmin = −0.82 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.254197 (12)1.14825 (12)0.14159 (3)0.01486 (13)
Cl20.149699 (12)0.64254 (12)−0.11406 (3)0.01413 (13)
O1−0.00572 (4)0.4635 (5)0.11828 (10)0.0162 (3)
N10.08094 (4)0.7191 (5)0.08948 (11)0.0127 (3)
N20.04458 (4)0.6666 (5)0.06771 (12)0.0141 (3)
N30.04484 (5)0.5433 (7)0.22395 (13)0.0222 (4)
C10.14889 (5)1.0482 (6)0.14140 (13)0.0132 (3)
H1A0.13271.09540.18190.016*
C20.18500 (5)1.1187 (5)0.17051 (14)0.0132 (3)
H2A0.19281.21310.22930.016*
C30.20913 (5)1.0451 (5)0.10974 (13)0.0120 (3)
C40.19805 (5)0.9013 (5)0.02261 (13)0.0124 (3)
H4A0.21450.8508−0.01720.015*
C50.16165 (5)0.8336 (5)−0.00436 (13)0.0112 (3)
C60.13617 (5)0.9086 (5)0.05322 (13)0.0112 (3)
C70.09697 (5)0.8539 (5)0.02541 (13)0.0116 (3)
C80.02647 (5)0.5559 (6)0.13727 (14)0.0152 (3)
C90.07833 (5)0.9765 (5)−0.06811 (13)0.0123 (3)
H9A0.05711.1034−0.06010.018*
H9B0.07200.7772−0.10780.018*
H9C0.09401.1272−0.09620.018*
H1N20.0320 (9)0.660 (8)0.014 (2)0.016 (7)*
H1N30.0663 (10)0.636 (10)0.231 (3)0.028 (9)*
H2N30.0324 (10)0.484 (10)0.262 (3)0.028 (9)*
U11U22U33U12U13U23
Cl10.0092 (2)0.0180 (2)0.0168 (2)−0.00196 (13)0.00036 (15)−0.00011 (14)
Cl20.0141 (2)0.0179 (2)0.0105 (2)−0.00169 (14)0.00232 (15)−0.00251 (14)
O10.0090 (6)0.0283 (8)0.0111 (6)−0.0027 (5)0.0010 (5)0.0002 (5)
N10.0076 (6)0.0192 (7)0.0111 (7)−0.0008 (5)0.0009 (5)0.0005 (5)
N20.0084 (6)0.0238 (8)0.0097 (7)−0.0026 (5)0.0005 (5)0.0012 (5)
N30.0114 (7)0.0461 (12)0.0088 (7)−0.0060 (8)0.0002 (6)0.0043 (7)
C10.0100 (7)0.0191 (8)0.0104 (7)−0.0019 (6)0.0016 (6)−0.0020 (6)
C20.0114 (7)0.0163 (8)0.0114 (7)−0.0007 (6)0.0005 (6)−0.0018 (6)
C30.0082 (7)0.0140 (8)0.0135 (8)−0.0007 (6)0.0006 (6)0.0011 (6)
C40.0119 (7)0.0126 (7)0.0130 (8)−0.0005 (6)0.0027 (6)−0.0004 (6)
C50.0113 (7)0.0127 (7)0.0097 (7)0.0001 (5)0.0021 (6)−0.0005 (5)
C60.0104 (7)0.0130 (7)0.0101 (7)−0.0007 (6)0.0015 (5)0.0013 (6)
C70.0099 (7)0.0141 (8)0.0105 (7)−0.0007 (5)0.0009 (6)−0.0003 (5)
C80.0109 (7)0.0234 (9)0.0116 (8)−0.0011 (7)0.0025 (6)0.0017 (7)
C90.0107 (7)0.0140 (8)0.0114 (7)−0.0011 (6)−0.0010 (6)0.0017 (6)
Cl1—C31.7403 (19)C1—H1A0.9300
Cl2—C51.7436 (19)C2—C31.391 (3)
O1—C81.256 (2)C2—H2A0.9300
N1—C71.291 (2)C3—C41.381 (3)
N1—N21.377 (2)C4—C51.395 (3)
N2—C81.369 (2)C4—H4A0.9300
N2—H1N20.85 (3)C5—C61.398 (3)
N3—C81.339 (3)C6—C71.489 (3)
N3—H1N30.88 (4)C7—C91.503 (3)
N3—H2N30.81 (4)C9—H9A0.9600
C1—C21.392 (3)C9—H9B0.9600
C1—C61.399 (3)C9—H9C0.9600
C7—N1—N2117.12 (16)C4—C5—C6122.38 (17)
C8—N2—N1118.08 (16)C4—C5—Cl2116.02 (14)
C8—N2—H1N2113 (2)C6—C5—Cl2121.59 (15)
N1—N2—H1N2128 (2)C5—C6—C1116.83 (17)
C8—N3—H1N3115 (2)C5—C6—C7123.95 (17)
C8—N3—H2N3112 (3)C1—C6—C7119.21 (16)
H1N3—N3—H2N3131 (4)N1—C7—C6114.76 (16)
C2—C1—C6122.24 (17)N1—C7—C9124.43 (17)
C2—C1—H1A118.9C6—C7—C9120.65 (16)
C6—C1—H1A118.9O1—C8—N3122.71 (18)
C3—C2—C1118.53 (17)O1—C8—N2120.16 (18)
C3—C2—H2A120.7N3—C8—N2117.11 (18)
C1—C2—H2A120.7C7—C9—H9A109.5
C4—C3—C2121.52 (17)C7—C9—H9B109.5
C4—C3—Cl1118.62 (14)H9A—C9—H9B109.5
C2—C3—Cl1119.83 (15)C7—C9—H9C109.5
C3—C4—C5118.48 (17)H9A—C9—H9C109.5
C3—C4—H4A120.8H9B—C9—H9C109.5
C5—C4—H4A120.8
C7—N1—N2—C8−173.82 (19)Cl2—C5—C6—C7−3.6 (3)
C6—C1—C2—C3−0.4 (3)C2—C1—C6—C51.6 (3)
C1—C2—C3—C4−0.7 (3)C2—C1—C6—C7−177.46 (18)
C1—C2—C3—Cl1177.08 (15)N2—N1—C7—C6179.31 (17)
C2—C3—C4—C50.7 (3)N2—N1—C7—C94.0 (3)
Cl1—C3—C4—C5−177.15 (14)C5—C6—C7—N1137.72 (19)
C3—C4—C5—C60.5 (3)C1—C6—C7—N1−43.3 (3)
C3—C4—C5—Cl2−178.54 (15)C5—C6—C7—C9−46.8 (3)
C4—C5—C6—C1−1.6 (3)C1—C6—C7—C9132.2 (2)
Cl2—C5—C6—C1177.39 (15)N1—N2—C8—O1−171.2 (2)
C4—C5—C6—C7177.37 (18)N1—N2—C8—N37.1 (3)
D—H···AD—HH···AD···AD—H···A
N2—H1N2···O1i0.85 (3)2.07 (3)2.907 (2)168 (3)
N3—H2N3···O1ii0.81 (4)2.13 (4)2.924 (2)164 (4)
C9—H9A···O1iii0.962.593.465 (2)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1N2⋯O1i0.85 (3)2.07 (3)2.907 (2)168 (3)
N3—H2N3⋯O1ii0.81 (4)2.13 (4)2.924 (2)164 (4)
C9—H9A⋯O1iii0.962.593.465 (2)152

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Spectroscopic and biological studies on newly synthesized nickel(II) complexes of semicarbazones and thiosemicarbazones.

Authors:  Sulekh Chandra; Lokesh Kumar Gupta
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2005-09-06       Impact factor: 4.098

3.  4-Substituted semicarbazones of mono- and dichlorobenzaldehydes as antihypertensive agents.

Authors:  J D Warren; D L Woodward; R T Hargreaves
Journal:  J Med Chem       Date:  1977-11       Impact factor: 7.446

4.  4-sulphamoylphenyl semicarbazones with anticonvulsant activity.

Authors:  P Yogeeswari; D Sriram; S N Pandeya; J P Stables
Journal:  Farmaco       Date:  2004-08

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  1 in total

1.  (E)-2-[1-(1-Benzothio-phen-2-yl)ethyl-idene]-N-phenyl-hydrazinecarboxamide.

Authors:  Safa'a Faris Kayed; Yang Farina; Jim Simpson; Ibrahim Baba
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-20
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.