| Literature DB >> 21577453 |
Abstract
The asymmetric unit of the title compound, [Zn(C(12)H(10)N(6))(2)(H(2)O)(2)](NO(3))(2), contains one-half of the complex molecule and one NO(3) (-) anion. The Zn(II) ion displays a distorted tetra-gonal-pyramidal geometry with four N atoms from two chelating 4-amino-3,5-di-2-pyridyl-1,2,4-triazole (2-bpt) lig-ands in the basal plane and one water mol-ecule occupying the apical site. Another water mol-ecule at the opposite of the apical site has a weak inter-action with the Zn(II) ion [Zn-O = 2.852 (5) Å]. The Zn(II) ion and the two water mol-ecules lie on a twofold rotation axis. An extensive system of hydrogen bonds involving the NH(2) groups of the 2-bpt ligands, water mol-ecules and nitrate anions links all residues into a three-dimensional network.Entities:
Year: 2009 PMID: 21577453 PMCID: PMC2969943 DOI: 10.1107/S1600536809032103
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C12H10N6)2(H2O)2](NO3)2 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3210 reflections |
| θ = 3.2–27.4° | |
| µ = 0.95 mm−1 | |
| β = 91.99 (3)° | Block, colorless |
| 0.25 × 0.20 × 0.20 mm | |
| Bruker SMART 1000 CCD diffractometer | 3210 independent reflections |
| Radiation source: sealed tube | 2424 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.4°, θmin = 3.2° |
| Absorption correction: multi-scan ( | |
| 13550 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3210 reflections | (Δ/σ)max < 0.001 |
| 228 parameters | Δρmax = 0.32 e Å−3 |
| 0 restraints | Δρmin = −0.64 e Å−3 |
| Zn1 | 0.0000 | 0.04107 (5) | 0.7500 | 0.03188 (15) | |
| O1W | 0.0000 | −0.1721 (3) | 0.7500 | 0.0441 (8) | |
| O2W | 0.0000 | 0.3439 (5) | 0.7500 | 0.1050 (19) | |
| O1 | 0.09893 (16) | 0.4526 (3) | 1.17312 (12) | 0.0646 (7) | |
| O2 | 0.03688 (16) | 0.4946 (2) | 1.07668 (12) | 0.0586 (6) | |
| O3 | −0.01516 (15) | 0.3294 (2) | 1.13778 (10) | 0.0511 (6) | |
| N1 | 0.03975 (14) | 0.0690 (2) | 0.84865 (10) | 0.0298 (5) | |
| N2 | 0.11637 (14) | 0.0466 (2) | 0.88711 (10) | 0.0304 (5) | |
| N3 | 0.01446 (13) | 0.1534 (2) | 0.94627 (9) | 0.0250 (4) | |
| N4 | −0.03229 (16) | 0.2187 (3) | 0.99862 (11) | 0.0345 (5) | |
| N5 | −0.12105 (14) | 0.1149 (2) | 0.79303 (10) | 0.0305 (5) | |
| N6 | 0.13761 (15) | 0.1407 (2) | 1.06063 (10) | 0.0335 (5) | |
| N7 | 0.04037 (16) | 0.4274 (2) | 1.12933 (12) | 0.0371 (5) | |
| C1 | −0.02138 (16) | 0.1310 (3) | 0.88464 (11) | 0.0251 (5) | |
| C2 | −0.11171 (16) | 0.1616 (3) | 0.85638 (12) | 0.0267 (5) | |
| C3 | −0.18075 (18) | 0.2271 (3) | 0.88886 (14) | 0.0349 (6) | |
| H3 | −0.1720 | 0.2599 | 0.9320 | 0.080* | |
| C4 | −0.26341 (18) | 0.2426 (3) | 0.85559 (15) | 0.0409 (7) | |
| H4 | −0.3112 | 0.2859 | 0.8762 | 0.080* | |
| C5 | −0.27402 (18) | 0.1930 (3) | 0.79131 (15) | 0.0428 (7) | |
| H5 | −0.3291 | 0.2014 | 0.7684 | 0.080* | |
| C6 | −0.20152 (18) | 0.1311 (3) | 0.76189 (13) | 0.0378 (7) | |
| H6 | −0.2087 | 0.0990 | 0.7185 | 0.080* | |
| C7 | 0.10017 (17) | 0.0992 (3) | 0.94616 (12) | 0.0268 (5) | |
| C8 | 0.16653 (17) | 0.0977 (3) | 1.00174 (12) | 0.0282 (5) | |
| C9 | 0.25491 (18) | 0.0556 (3) | 0.99173 (13) | 0.0331 (6) | |
| H9 | 0.2726 | 0.0256 | 0.9503 | 0.080* | |
| C10 | 0.31574 (18) | 0.0597 (3) | 1.04516 (15) | 0.0393 (7) | |
| H10 | 0.3750 | 0.0306 | 1.0404 | 0.080* | |
| C11 | 0.2877 (2) | 0.1073 (3) | 1.10541 (15) | 0.0416 (7) | |
| H11 | 0.3279 | 0.1131 | 1.1415 | 0.080* | |
| C12 | 0.1988 (2) | 0.1460 (3) | 1.11125 (13) | 0.0381 (6) | |
| H12 | 0.1802 | 0.1774 | 1.1522 | 0.080* | |
| H4A | −0.026 (3) | 0.317 (4) | 0.9919 (19) | 0.080* | |
| H4B | 0.004 (3) | 0.204 (4) | 1.034 (2) | 0.080* | |
| H1W | 0.001 (2) | −0.214 (3) | 0.7165 (14) | 0.046 (10)* | |
| H2W | 0.040 (3) | 0.410 (5) | 0.734 (3) | 0.13 (2)* |
| Zn1 | 0.0277 (2) | 0.0478 (3) | 0.0200 (2) | 0.000 | −0.00160 (16) | 0.000 |
| O1W | 0.066 (2) | 0.0431 (18) | 0.0229 (16) | 0.000 | −0.0029 (15) | 0.000 |
| O2W | 0.151 (5) | 0.057 (3) | 0.111 (4) | 0.000 | 0.071 (4) | 0.000 |
| O1 | 0.0634 (15) | 0.0664 (16) | 0.0616 (16) | −0.0025 (13) | −0.0322 (13) | −0.0026 (13) |
| O2 | 0.0622 (15) | 0.0615 (15) | 0.0514 (14) | −0.0047 (12) | −0.0083 (12) | 0.0277 (12) |
| O3 | 0.0537 (13) | 0.0614 (15) | 0.0383 (12) | −0.0128 (12) | 0.0016 (10) | 0.0083 (10) |
| N1 | 0.0270 (11) | 0.0368 (13) | 0.0253 (11) | 0.0028 (9) | −0.0030 (9) | −0.0018 (9) |
| N2 | 0.0271 (11) | 0.0375 (12) | 0.0261 (11) | 0.0024 (10) | −0.0054 (9) | −0.0002 (10) |
| N3 | 0.0267 (10) | 0.0266 (11) | 0.0215 (10) | 0.0003 (9) | −0.0009 (8) | −0.0023 (8) |
| N4 | 0.0344 (12) | 0.0418 (13) | 0.0273 (12) | 0.0038 (11) | 0.0018 (10) | −0.0097 (10) |
| N5 | 0.0278 (11) | 0.0394 (13) | 0.0242 (11) | 0.0010 (10) | −0.0028 (9) | 0.0017 (9) |
| N6 | 0.0422 (13) | 0.0328 (12) | 0.0250 (11) | 0.0006 (10) | −0.0047 (10) | 0.0003 (9) |
| N7 | 0.0366 (13) | 0.0393 (14) | 0.0350 (13) | 0.0044 (11) | −0.0049 (10) | 0.0015 (11) |
| C1 | 0.0262 (12) | 0.0264 (12) | 0.0225 (12) | −0.0008 (10) | −0.0026 (10) | 0.0001 (10) |
| C2 | 0.0278 (12) | 0.0245 (12) | 0.0275 (13) | 0.0000 (10) | −0.0022 (10) | 0.0012 (10) |
| C3 | 0.0326 (14) | 0.0338 (14) | 0.0380 (15) | 0.0030 (12) | −0.0006 (12) | −0.0029 (12) |
| C4 | 0.0293 (14) | 0.0428 (16) | 0.0505 (18) | 0.0073 (12) | −0.0015 (13) | −0.0043 (14) |
| C5 | 0.0302 (14) | 0.0546 (19) | 0.0430 (17) | 0.0058 (13) | −0.0079 (13) | 0.0075 (14) |
| C6 | 0.0300 (14) | 0.0540 (18) | 0.0288 (14) | 0.0012 (13) | −0.0068 (11) | 0.0038 (13) |
| C7 | 0.0278 (12) | 0.0265 (12) | 0.0261 (13) | 0.0003 (10) | −0.0014 (10) | 0.0010 (10) |
| C8 | 0.0328 (13) | 0.0265 (13) | 0.0252 (12) | −0.0028 (11) | −0.0027 (11) | 0.0017 (10) |
| C9 | 0.0317 (13) | 0.0338 (14) | 0.0334 (14) | −0.0006 (12) | −0.0040 (11) | −0.0006 (12) |
| C10 | 0.0320 (14) | 0.0390 (16) | 0.0463 (17) | −0.0017 (12) | −0.0092 (13) | 0.0050 (13) |
| C11 | 0.0438 (17) | 0.0413 (16) | 0.0384 (16) | −0.0059 (13) | −0.0173 (13) | 0.0066 (13) |
| C12 | 0.0479 (17) | 0.0404 (16) | 0.0251 (13) | −0.0030 (13) | −0.0097 (12) | 0.0019 (12) |
| Zn1—O1W | 2.008 (3) | N6—C12 | 1.346 (3) |
| Zn1—O2W | 2.852 (5) | C1—C2 | 1.469 (3) |
| Zn1—N1 | 2.078 (2) | C2—C3 | 1.382 (4) |
| Zn1—N5 | 2.141 (2) | C3—C4 | 1.387 (4) |
| O1W—H1W | 0.79 (3) | C3—H3 | 0.9300 |
| O2W—H2W | 0.92 (5) | C4—C5 | 1.386 (4) |
| O1—N7 | 1.243 (3) | C4—H4 | 0.9300 |
| O2—N7 | 1.238 (3) | C5—C6 | 1.378 (4) |
| O3—N7 | 1.253 (3) | C5—H5 | 0.9300 |
| N1—C1 | 1.319 (3) | C6—H6 | 0.9300 |
| N1—N2 | 1.373 (3) | C7—C8 | 1.469 (3) |
| N2—C7 | 1.323 (3) | C8—C9 | 1.393 (4) |
| N3—C1 | 1.355 (3) | C9—C10 | 1.385 (4) |
| N3—C7 | 1.372 (3) | C9—H9 | 0.9300 |
| N3—N4 | 1.426 (3) | C10—C11 | 1.377 (4) |
| N4—H4A | 0.94 (4) | C10—H10 | 0.9300 |
| N4—H4B | 0.89 (4) | C11—C12 | 1.379 (4) |
| N5—C6 | 1.340 (3) | C11—H11 | 0.9300 |
| N5—C2 | 1.358 (3) | C12—H12 | 0.9300 |
| N6—C8 | 1.343 (3) | ||
| O1W—Zn1—N1 | 97.28 (6) | N5—C2—C3 | 122.7 (2) |
| O1W—Zn1—N1i | 97.28 (6) | N5—C2—C1 | 111.5 (2) |
| N1—Zn1—N1i | 165.44 (12) | C3—C2—C1 | 125.9 (2) |
| O1W—Zn1—N5i | 108.96 (6) | C2—C3—C4 | 118.4 (3) |
| N1—Zn1—N5i | 97.73 (8) | C2—C3—H3 | 120.8 |
| N1i—Zn1—N5i | 77.47 (8) | C4—C3—H3 | 120.8 |
| O1W—Zn1—N5 | 108.96 (6) | C5—C4—C3 | 119.3 (3) |
| N1—Zn1—N5 | 77.47 (8) | C5—C4—H4 | 120.3 |
| N1i—Zn1—N5 | 97.73 (8) | C3—C4—H4 | 120.3 |
| N5i—Zn1—N5 | 142.09 (12) | C6—C5—C4 | 118.9 (3) |
| O2W—Zn1—N1 | 82.73 (5) | C6—C5—H5 | 120.6 |
| O2W—Zn1—N5 | 71.05 (5) | C4—C5—H5 | 120.6 |
| Zn1—O1W—H1W | 120 (2) | N5—C6—C5 | 122.9 (3) |
| C1—N1—N2 | 109.2 (2) | N5—C6—H6 | 118.6 |
| C1—N1—Zn1 | 114.07 (16) | C5—C6—H6 | 118.6 |
| N2—N1—Zn1 | 136.65 (16) | N2—C7—N3 | 109.8 (2) |
| C7—N2—N1 | 106.3 (2) | N2—C7—C8 | 123.3 (2) |
| C1—N3—C7 | 106.0 (2) | N3—C7—C8 | 126.9 (2) |
| C1—N3—N4 | 124.4 (2) | N6—C8—C9 | 123.1 (2) |
| C7—N3—N4 | 129.6 (2) | N6—C8—C7 | 116.7 (2) |
| N3—N4—H4A | 105 (2) | C9—C8—C7 | 120.2 (2) |
| N3—N4—H4B | 104 (2) | C10—C9—C8 | 118.1 (3) |
| H4A—N4—H4B | 102 (3) | C10—C9—H9 | 120.9 |
| C6—N5—C2 | 117.9 (2) | C8—C9—H9 | 120.9 |
| C6—N5—Zn1 | 126.42 (18) | C11—C10—C9 | 119.4 (3) |
| C2—N5—Zn1 | 115.42 (16) | C11—C10—H10 | 120.3 |
| C8—N6—C12 | 117.3 (2) | C9—C10—H10 | 120.3 |
| O2—N7—O1 | 121.5 (3) | C10—C11—C12 | 118.8 (3) |
| O2—N7—O3 | 119.0 (2) | C10—C11—H11 | 120.6 |
| O1—N7—O3 | 119.4 (2) | C12—C11—H11 | 120.6 |
| N1—C1—N3 | 108.7 (2) | N6—C12—C11 | 123.2 (3) |
| N1—C1—C2 | 120.6 (2) | N6—C12—H12 | 118.4 |
| N3—C1—C2 | 130.7 (2) | C11—C12—H12 | 118.4 |
| H··· | ||||
| N4—H4A···O2ii | 0.94 (4) | 2.25 (4) | 3.100 (3) | 149 (3) |
| N4—H4A···O2 | 0.94 (4) | 2.55 (4) | 3.192 (4) | 126 (3) |
| N4—H4B···N6 | 0.89 (4) | 2.13 (4) | 2.875 (3) | 141 (3) |
| N4—H4B···O3 | 0.89 (4) | 2.43 (4) | 3.005 (3) | 122 (3) |
| O1W—H1W···O3iii | 0.79 (3) | 1.93 (3) | 2.714 (3) | 170 (3) |
| O2W—H2W···O1iv | 0.92 (5) | 2.02 (5) | 2.900 (4) | 161 (5) |
Selected bond lengths (Å)
| Zn1—O1 | 2.008 (3) |
| Zn1—O2 | 2.852 (5) |
| Zn1—N1 | 2.078 (2) |
| Zn1—N5 | 2.141 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.94 (4) | 2.25 (4) | 3.100 (3) | 149 (3) |
| N4—H4 | 0.94 (4) | 2.55 (4) | 3.192 (4) | 126 (3) |
| N4—H4 | 0.89 (4) | 2.13 (4) | 2.875 (3) | 141 (3) |
| N4—H4 | 0.89 (4) | 2.43 (4) | 3.005 (3) | 122 (3) |
| O1 | 0.79 (3) | 1.93 (3) | 2.714 (3) | 170 (3) |
| O2 | 0.92 (5) | 2.02 (5) | 2.900 (4) | 161 (5) |
Symmetry codes: (i) ; (ii) ; (iii) .