Literature DB >> 21575730

Diffusion tensor microscopy in human nervous tissue with quantitative correlation based on direct histological comparison.

Brian Hansen1, Jeremy J Flint, Choong Heon-Lee, Michael Fey, Franck Vincent, Michael A King, Peter Vestergaard-Poulsen, Stephen J Blackband.   

Abstract

Thanks to its proven utility in both clinical and research applications, diffusion tensor tractography (DTT) is regularly employed as a means of delineating white-matter tracts. While successful efforts have been made to validate tractographic predictions, comparative methods which would permit the validation of such predictions at microscopic resolutions in complex biological tissues have remained elusive. In a previous study, we attempted to validate for the first time such predictions at microscopic resolutions in rat and pig spinal cords using a semi-quantitative analysis method. In the current study, we report improved quantitative analysis methods that can be used to determine the accuracy of DTT through comparative histology and apply these techniques for the first time to human tissue (spinal cord) samples. Histological images are down-sampled to resolutions equivalent to our magnetic resonance microscopy (MRM) and converted to binary maps using an automated thresholding tool. These maps (n=3) are co-registered to the MRM allowing us to quantify the agreement based on the number of pixels which contain tracts common to both imaging datasets. In our experiments, we find that-on average-89% of imaging pixels predicted by DTT to contain in-plane white-matter tract structure correspond to physical tracts identified by histology. In addition, angular analysis comparing the orientation of fiber tracts measured in histology to their corresponding in-plane primary eigenvector components is presented. Thus, as well as demonstrating feasibility in human tissue, we report a robust agreement between imaging datasets taken at microscopic resolution and confirm the primary eigenvector's role as a fundamental parameter with clear physical correlates in the microscopic regime. Published by Elsevier Inc.

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Year:  2011        PMID: 21575730      PMCID: PMC3138905          DOI: 10.1016/j.neuroimage.2011.04.052

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  39 in total

1.  Analysis of partial volume effects in diffusion-tensor MRI.

Authors:  A L Alexander; K M Hasan; M Lazar; J S Tsuruda; D L Parker
Journal:  Magn Reson Med       Date:  2001-05       Impact factor: 4.668

2.  Limitations and requirements of diffusion tensor fiber tracking: an assessment using simulations.

Authors:  J-D Tournier; F Calamante; M D King; D G Gadian; A Connelly
Journal:  Magn Reson Med       Date:  2002-04       Impact factor: 4.668

3.  Diffusion MRI of complex neural architecture.

Authors:  David S Tuch; Timothy G Reese; Mette R Wiegell; Van J Wedeen
Journal:  Neuron       Date:  2003-12-04       Impact factor: 17.173

4.  Characterization of anisotropy in high angular resolution diffusion-weighted MRI.

Authors:  Lawrence R Frank
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

5.  Probabilistic segmentation of white matter lesions in MR imaging.

Authors:  Petronella Anbeek; Koen L Vincken; Matthias J P van Osch; Robertus H C Bisschops; Jeroen van der Grond
Journal:  Neuroimage       Date:  2004-03       Impact factor: 6.556

6.  Diffusion tensor fiber tracking of human brain connectivity: aquisition methods, reliability analysis and biological results.

Authors:  N F Lori; E Akbudak; J S Shimony; T S Cull; A Z Snyder; R K Guillory; T E Conturo
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

7.  Dysmyelination revealed through MRI as increased radial (but unchanged axial) diffusion of water.

Authors:  Sheng-Kwei Song; Shu-Wei Sun; Michael J Ramsbottom; Chen Chang; John Russell; Anne H Cross
Journal:  Neuroimage       Date:  2002-11       Impact factor: 6.556

8.  Cellular-level diffusion tensor microscopy and fiber tracking in mammalian nervous tissue with direct histological correlation.

Authors:  Jeremy J Flint; Brian Hansen; Michael Fey; Daniel Schmidig; Michael A King; Peter Vestergaard-Poulsen; Stephen J Blackband
Journal:  Neuroimage       Date:  2010-04-18       Impact factor: 6.556

9.  Validation of diffusion spectrum magnetic resonance imaging with manganese-enhanced rat optic tracts and ex vivo phantoms.

Authors:  Ching-Po Lin; Van Jay Wedeen; Jyh-Horng Chen; Ching Yao; Wen-Yih Isaac Tseng
Journal:  Neuroimage       Date:  2003-07       Impact factor: 6.556

10.  Detection and modeling of non-Gaussian apparent diffusion coefficient profiles in human brain data.

Authors:  D C Alexander; G J Barker; S R Arridge
Journal:  Magn Reson Med       Date:  2002-08       Impact factor: 4.668

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  23 in total

1.  Magnetic resonance microscopy of human and porcine neurons and cellular processes.

Authors:  Jeremy J Flint; Brian Hansen; Sharon Portnoy; Choong-Heon Lee; Michael A King; Michael Fey; Franck Vincent; Greg J Stanisz; Peter Vestergaard-Poulsen; Stephen J Blackband
Journal:  Neuroimage       Date:  2012-01-14       Impact factor: 6.556

2.  Diffusion Kurtosis Imaging as a Tool in Neurotoxicology.

Authors:  Brian Hansen
Journal:  Neurotox Res       Date:  2019-08-17       Impact factor: 3.911

3.  3D structure tensor analysis of light microscopy data for validating diffusion MRI.

Authors:  Ahmad Raza Khan; Anda Cornea; Lindsey A Leigland; Steven G Kohama; Sune Nørhøj Jespersen; Christopher D Kroenke
Journal:  Neuroimage       Date:  2015-02-07       Impact factor: 6.556

Review 4.  The neural circuitry of restricted repetitive behavior: Magnetic resonance imaging in neurodevelopmental disorders and animal models.

Authors:  B J Wilkes; M H Lewis
Journal:  Neurosci Biobehav Rev       Date:  2018-05-23       Impact factor: 8.989

5.  Disconnection of the ascending arousal system in traumatic coma.

Authors:  Brian L Edlow; Robin L Haynes; Emi Takahashi; Joshua P Klein; Peter Cummings; Thomas Benner; David M Greer; Steven M Greenberg; Ona Wu; Hannah C Kinney; Rebecca D Folkerth
Journal:  J Neuropathol Exp Neurol       Date:  2013-06       Impact factor: 3.685

6.  Cross-validation of serial optical coherence scanning and diffusion tensor imaging: a study on neural fiber maps in human medulla oblongata.

Authors:  Hui Wang; Junfeng Zhu; Martin Reuter; Louis N Vinke; Anastasia Yendiki; David A Boas; Bruce Fischl; Taner Akkin
Journal:  Neuroimage       Date:  2014-06-20       Impact factor: 6.556

7.  Localized diffusion magnetic resonance micro-imaging of the live mouse brain.

Authors:  Dan Wu; Dominik Reisinger; Jiadi Xu; S Ali Fatemi; Peter C M van Zijl; Susumu Mori; Jiangyang Zhang
Journal:  Neuroimage       Date:  2014-01-17       Impact factor: 6.556

8.  Diffusion time dependence of microstructural parameters in fixed spinal cord.

Authors:  Sune Nørhøj Jespersen; Jonas Lynge Olesen; Brian Hansen; Noam Shemesh
Journal:  Neuroimage       Date:  2017-08-14       Impact factor: 6.556

9.  Design and validation of diffusion MRI models of white matter.

Authors:  Ileana O Jelescu; Matthew D Budde
Journal:  Front Phys       Date:  2017-11-28

10.  Mapping remodeling of thalamocortical projections in the living reeler mouse brain by diffusion tractography.

Authors:  Laura-Adela Harsan; Csaba Dávid; Marco Reisert; Susanne Schnell; Jürgen Hennig; Dominik von Elverfeldt; Jochen F Staiger
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-22       Impact factor: 11.205

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