Literature DB >> 21572446

Molecular design principles underlying β-strand swapping in the adhesive dimerization of cadherins.

Jeremie Vendome1, Shoshana Posy, Xiangshu Jin, Fabiana Bahna, Goran Ahlsen, Lawrence Shapiro, Barry Honig.   

Abstract

Cell adhesion by classical cadherins is mediated by dimerization of their EC1 domains through the 'swapping' of N-terminal β-strands. We use molecular simulations, measurements of binding affinities and X-ray crystallography to provide a detailed picture of the structural and energetic factors that control the adhesive dimerization of cadherins. We show that strand swapping in EC1 is driven by conformational strain in cadherin monomers that arises from the anchoring of their short N-terminal strand at one end by the conserved Trp2 and at the other by ligation to Ca(2+) ions. We also demonstrate that a conserved proline-proline motif functions to avoid the formation of an overly tight interface where affinity differences between different cadherins, crucial at the cellular level, are lost. We use these findings to design site-directed mutations that transform a monomeric EC2-EC3 domain cadherin construct into a strand-swapped dimer.

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Year:  2011        PMID: 21572446      PMCID: PMC3113550          DOI: 10.1038/nsmb.2051

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  38 in total

1.  C-cadherin ectodomain structure and implications for cell adhesion mechanisms.

Authors:  Titus J Boggon; John Murray; Sophie Chappuis-Flament; Ellen Wong; Barry M Gumbiner; Lawrence Shapiro
Journal:  Science       Date:  2002-04-18       Impact factor: 47.728

2.  Specificity of cell-cell adhesion by classical cadherins: Critical role for low-affinity dimerization through beta-strand swapping.

Authors:  Chien Peter Chen; Shoshana Posy; Avinoam Ben-Shaul; Lawrence Shapiro; Barry H Honig
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-03       Impact factor: 11.205

3.  Type II cadherin ectodomain structures: implications for classical cadherin specificity.

Authors:  Saurabh D Patel; Carlo Ciatto; Chien Peter Chen; Fabiana Bahna; Manisha Rajebhosale; Natalie Arkus; Ira Schieren; Thomas M Jessell; Barry Honig; Stephen R Price; Lawrence Shapiro
Journal:  Cell       Date:  2006-03-24       Impact factor: 41.582

4.  The crystal structure of human E-cadherin domains 1 and 2, and comparison with other cadherins in the context of adhesion mechanism.

Authors:  Emilio Parisini; Jonathan M G Higgins; Jin-huan Liu; Michael B Brenner; Jia-huai Wang
Journal:  J Mol Biol       Date:  2007-08-21       Impact factor: 5.469

Review 5.  Structure and biochemistry of cadherins and catenins.

Authors:  Lawrence Shapiro; William I Weis
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-09       Impact factor: 10.005

Review 6.  Molecular evolution of the cadherin superfamily.

Authors:  Paco Hulpiau; Frans van Roy
Journal:  Int J Biochem Cell Biol       Date:  2008-10-04       Impact factor: 5.085

7.  Sequence and structural determinants of strand swapping in cadherin domains: do all cadherins bind through the same adhesive interface?

Authors:  Shoshana Posy; Lawrence Shapiro; Barry Honig
Journal:  J Mol Biol       Date:  2008-03-04       Impact factor: 5.469

8.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Dynamic properties of a type II cadherin adhesive domain: implications for the mechanism of strand-swapping of classical cadherins.

Authors:  Vesselin Z Miloushev; Fabiana Bahna; Carlo Ciatto; Goran Ahlsen; Barry Honig; Lawrence Shapiro; Arthur G Palmer
Journal:  Structure       Date:  2008-08-06       Impact factor: 5.006

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  42 in total

1.  Spontaneous dimerization of titin protein Z1Z2 domains induces strong nanomechanical anchoring.

Authors:  Sergi Garcia-Manyes; Carmen L Badilla; Jorge Alegre-Cebollada; Yalda Javadi; Julio M Fernández
Journal:  J Biol Chem       Date:  2012-04-21       Impact factor: 5.157

2.  Cadherin-dependent mechanotransduction depends on ligand identity but not affinity.

Authors:  Hamid Tabdili; Matthew Langer; Quanming Shi; Yeh-Chuin Poh; Ning Wang; Deborah Leckband
Journal:  J Cell Sci       Date:  2012-06-20       Impact factor: 5.285

Review 3.  Cadherin recognition and adhesion.

Authors:  Deborah Leckband; Sanjeevi Sivasankar
Journal:  Curr Opin Cell Biol       Date:  2012-07-06       Impact factor: 8.382

4.  The X-ray structure of human P-cadherin EC1-EC2 in a closed conformation provides insight into the type I cadherin dimerization pathway.

Authors:  Andrea Dalle Vedove; Anna Paola Lucarelli; Valentina Nardone; Angelica Matino; Emilio Parisini
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-03-20       Impact factor: 1.056

5.  A potential new, stable state of the E-cadherin strand-swapped dimer in solution.

Authors:  Alexandra Schumann-Gillett; Alan E Mark; Evelyne Deplazes; Megan L O'Mara
Journal:  Eur Biophys J       Date:  2017-06-15       Impact factor: 1.733

6.  Ideal, catch, and slip bonds in cadherin adhesion.

Authors:  Sabyasachi Rakshit; Yunxiang Zhang; Kristine Manibog; Omer Shafraz; Sanjeevi Sivasankar
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-29       Impact factor: 11.205

7.  Structural and energetic determinants of adhesive binding specificity in type I cadherins.

Authors:  Jeremie Vendome; Klara Felsovalyi; Hang Song; Zhongyu Yang; Xiangshu Jin; Julia Brasch; Oliver J Harrison; Goran Ahlsen; Fabiana Bahna; Anna Kaczynska; Phinikoula S Katsamba; Darwin Edmond; Wayne L Hubbell; Lawrence Shapiro; Barry Honig
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-24       Impact factor: 11.205

8.  Molecular determinants of cadherin ideal bond formation: Conformation-dependent unbinding on a multidimensional landscape.

Authors:  Kristine Manibog; Kannan Sankar; Sun-Ae Kim; Yunxiang Zhang; Robert L Jernigan; Sanjeevi Sivasankar
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-12       Impact factor: 11.205

9.  Sensing Actin Dynamics through Adherens Junctions.

Authors:  Indrajyoti Indra; Regina B Troyanovsky; Lawrence Shapiro; Barry Honig; Sergey M Troyanovsky
Journal:  Cell Rep       Date:  2020-02-25       Impact factor: 9.423

10.  Neisserial Opa Protein-CEACAM Interactions: Competition for Receptors as a Means of Bacterial Invasion and Pathogenesis.

Authors:  Jennifer N Martin; Louise M Ball; Tsega L Solomon; Alison H Dewald; Alison K Criss; Linda Columbus
Journal:  Biochemistry       Date:  2016-08-01       Impact factor: 3.162

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