Literature DB >> 21571999

Genome sequence of a novel species, Propionibacterium humerusii.

Susan M Butler-Wu1, Dhruba J Sengupta, Weerayuth Kittichotirat, Frederick A Matsen, Roger E Bumgarner.   

Abstract

As part of a larger project to sequence multiple clinical isolates of Propionibacterium acnes, we have produced a draft genome sequence of a novel Propionibacterium species that is closely related to, yet distinct (by sequence) from P. acnes. We have tentatively named this new species Propionibacterium humerusii.

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Year:  2011        PMID： 21571999      PMCID： PMC3133328          DOI： 10.1128/JB.05036-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  5 in total

1.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Ureaplasma urealyticum continuous ambulatory peritoneal dialysis-associated peritonitis diagnosed by 16S rRNA gene PCR.

Authors:  Jessica E Yager; Emily S Ford; Zachary P Boas; Leah A Haseley; Brad T Cookson; Dhruba J Sengupta; Ferric C Fang; Geoffrey S Gottlieb
Journal:  J Clin Microbiol       Date:  2010-08-25       Impact factor: 5.948

5.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  5 in total
  20 in total

1.  Origin of propionibacterium in surgical wounds and evidence-based approach for culturing propionibacterium from surgical sites.

Authors:  Frederick A Matsen; Susan Butler-Wu; Bradley C Carofino; Jocelyn L Jette; Alexander Bertelsen; Roger Bumgarner
Journal:  J Bone Joint Surg Am       Date:  2013-12-04       Impact factor: 5.284

2.  The diversity and host interactions of Propionibacterium acnes bacteriophages on human skin.

Authors:  Jared Liu; Riceley Yan; Qiao Zhong; Sam Ngo; Nathanael J Bangayan; Lin Nguyen; Timothy Lui; Minghsun Liu; Marie C Erfe; Noah Craft; Shuta Tomida; Huiying Li
Journal:  ISME J       Date:  2015-04-07       Impact factor: 10.302

Review 3.  Clinical and Biological Features of Cutibacterium (Formerly Propionibacterium) avidum, an Underrecognized Microorganism.

Authors:  Stéphane Corvec
Journal:  Clin Microbiol Rev       Date:  2018-05-30       Impact factor: 26.132

Review 4.  Dairy propionibacteria as probiotics: recent evidences.

Authors:  Clelia Altieri
Journal:  World J Microbiol Biotechnol       Date:  2016-08-26       Impact factor: 3.312

5.  Multilocus sequence typing and phylogenetic analysis of Propionibacterium acnes.

Authors:  Mogens Kilian; Christian F P Scholz; Hans B Lomholt
Journal:  J Clin Microbiol       Date:  2012-01-18       Impact factor: 5.948

6.  Intercellular adhesion molecule-1 (ICAM-1, CD54) is increased in adhesive capsulitis.

Authors:  Yang-Soo Kim; Jung-Man Kim; Yun-Gyoung Lee; Oak-Kee Hong; Hyuk-Sang Kwon; Jong-Hoon Ji
Journal:  J Bone Joint Surg Am       Date:  2013-02-20       Impact factor: 5.284

7.  Cutibacterium modestum and "Propionibacterium humerusii" represent the same species that is commonly misidentified as Cutibacterium acnes.

Authors:  Daniel Goldenberger; Kirstine K Søgaard; Aline Cuénod; Helena Seth-Smith; Daniel de Menezes; Peter Vandamme; Adrian Egli
Journal:  Antonie Van Leeuwenhoek       Date:  2021-05-07       Impact factor: 2.271

8.  Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization.

Authors:  Itai Sharon; Michael J Morowitz; Brian C Thomas; Elizabeth K Costello; David A Relman; Jillian F Banfield
Journal:  Genome Res       Date:  2012-08-30       Impact factor: 9.043

9.  The flexible gene pool of Propionibacterium acnes.

Authors:  Holger Brüggemann; Hans B Lomholt; Mogens Kilian
Journal:  Mob Genet Elements       Date:  2012-05-01

10.  An expanded multilocus sequence typing scheme for propionibacterium acnes: investigation of 'pathogenic', 'commensal' and antibiotic resistant strains.

Authors:  Andrew McDowell; Emma Barnard; István Nagy; Anna Gao; Shuta Tomida; Huiying Li; Anne Eady; Jonathan Cove; Carl E Nord; Sheila Patrick
Journal:  PLoS One       Date:  2012-07-30       Impact factor: 3.240
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