Literature DB >> 21564770

Microsatellite markers for mungbean developed from sequence database.

Worapa Seehalak1, Prakit Somta, Warunee Sommanas, Peerasak Srinives.   

Abstract

A novel set of microsatellite markers for mungbean [Vigna radiata (L.) Wilczek] was developed from the public sequence database. Seventy-eight primers were designed and evaluated for polymorphism among 22 cultivated accessions. Eight polymorphic loci detected two to three alleles per locus with an average of 2.25. The observed heterozygosity varied from 0.00 to 0.18, while the expected heterozygosity ranged from 0.09 to 0.46. Among them, all eight loci showed significant departuring from Hardy-Weinberg equilibrium, while four pairs of loci displayed significant pairwise linkage disequilibrium values. All eight loci except DMB-SSR1 showed heterozygote deficiency.
© 2009 The Authors. Journal compilation © 2009 Blackwell Publishing Ltd.

Entities:  

Year:  2009        PMID: 21564770     DOI: 10.1111/j.1755-0998.2009.02655.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  10 in total

1.  Sequence related amplified polymorphism (SRAP) analysis for genetic diversity and micronutrient content among gene pools in mungbean [Vigna radiata (L.) Wilczek].

Authors:  Bharti Aneja; Neelam R Yadav; Ram C Yadav; Ram Kumar
Journal:  Physiol Mol Biol Plants       Date:  2013-07

2.  Construction of genetic linkage map and genome dissection of domestication-related traits of moth bean (Vigna aconitifolia), a legume crop of arid areas.

Authors:  Chutintorn Yundaeng; Prakit Somta; Kitiya Amkul; Alisa Kongjaimun; Akito Kaga; Norihiko Tomooka
Journal:  Mol Genet Genomics       Date:  2019-02-09       Impact factor: 3.291

3.  Quantitative trait locus mapping under irrigated and drought treatments based on a novel genetic linkage map in mungbean (Vigna radiata L.).

Authors:  Changyou Liu; Jing Wu; Lanfen Wang; Baojie Fan; Zhimin Cao; Qiuzhu Su; Zhixiao Zhang; Yan Wang; Jing Tian; Shumin Wang
Journal:  Theor Appl Genet       Date:  2017-08-22       Impact factor: 5.699

4.  Genetic diversity of the black gram [Vigna mungo (L.) Hepper] gene pool as revealed by SSR markers.

Authors:  Anochar Kaewwongwal; Alisa Kongjaimun; Prakit Somta; Sompong Chankaew; Tarikar Yimram; Peerasak Srinives
Journal:  Breed Sci       Date:  2015-03-01       Impact factor: 2.086

5.  QTL analysis of domestication syndrome in zombi pea (Vigna vexillata), an underutilized legume crop.

Authors:  Sujinna Dachapak; Norihiko Tomooka; Prakit Somta; Ken Naito; Akito Kaga; Peerasak Srinives
Journal:  PLoS One       Date:  2018-12-18       Impact factor: 3.240

Review 6.  Thirty Years of Mungbean Genome Research: Where Do We Stand and What Have We Learned?

Authors:  Prakit Somta; Kularb Laosatit; Xingxing Yuan; Xin Chen
Journal:  Front Plant Sci       Date:  2022-07-15       Impact factor: 6.627

7.  Characterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek).

Authors:  Sithichoke Tangphatsornruang; Prakit Somta; Pichahpuk Uthaipaisanwong; Juntima Chanprasert; Duangjai Sangsrakru; Worapa Seehalak; Warunee Sommanas; Somvong Tragoonrung; Peerasak Srinives
Journal:  BMC Plant Biol       Date:  2009-11-24       Impact factor: 4.215

8.  Mapping of quantitative trait loci for phytic acid and phosphorus contents in seed and seedling of mungbean (Vigna radiata (L.) Wilczek).

Authors:  Utumporn Sompong; Prakit Somta; Victor Raboy; Peerasak Srinives
Journal:  Breed Sci       Date:  2012-03-20       Impact factor: 2.086

Review 9.  Genomic resources in mungbean for future breeding programs.

Authors:  Sue K Kim; Ramakrishnan M Nair; Jayern Lee; Suk-Ha Lee
Journal:  Front Plant Sci       Date:  2015-08-10       Impact factor: 5.753

10.  Narrowing Down a Major QTL Region Conferring Pod Fiber Contents in Yardlong Bean (Vigna unguiculata), a Vegetable Cowpea.

Authors:  Phurisorn Watcharatpong; Akito Kaga; Xin Chen; Prakit Somta
Journal:  Genes (Basel)       Date:  2020-03-27       Impact factor: 4.096

  10 in total

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