Literature DB >> 21559881

Chromosome diversity and evolution in tribe Lilieae (Liliaceae) with emphasis on Chinese species.

Yun-Dong Gao1, Song-Dong Zhou, Xing-Jin He, Juan Wan.   

Abstract

In this paper, karyotype data of the tribe Lilieae in China were analyzed and been superimposed onto a phylogenetic framework constructed by the internal transcribed spacer to investigate the karyotype evolution. Ten parameters for analyzing karyotype asymmetry were assessed and karyotypic idiogram of five genera of Lilieae were illustrated. The results showed that, the relationship of genera in Lilieae that inferred from Maximum Parsimony criteria and Bayesian Inference were congruent with previous studies, which focused on higher level of Liliales. The karyotype showed distinctive among genera, mainly expressed on the location and amount of secondary constrictions and intercalary satellites: the genus Notholirion have neither of them, and the genera Cardiocrinum and Fritillaria have the secondary constriction alone; the genera Lilium and Nomocharis showed both features, and the distribute pattern of the intercalary satellites showed similarity among related clades. The asymmetry that assessed by several methods indicated that the evolution trend of Lilieae did not follow a single direction, but different in each genus. On the sectional level of the genus Lilium (including Nomocharis) the karyotype evolution included three major periods. Combining the chromosomal structure variations and karyotype asymmetry, the chromosome diversity and evolution in Lilieae were quite clear in the light of molecular inference.

Mesh:

Year:  2011        PMID: 21559881     DOI: 10.1007/s10265-011-0422-1

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  12 in total

1.  Timing the eastern Asian-eastern North American floristic disjunction: molecular clock corroborates paleontological estimates.

Authors:  Q Y Xiang; D E Soltis; P S Soltis; S R Manchester; D J Crawford
Journal:  Mol Phylogenet Evol       Date:  2000-06       Impact factor: 4.286

2.  Phylogeny, concerted convergence, and phylogenetic niche conservatism in the core Liliales: insights from rbcL and ndhF sequence data.

Authors:  Thomas B Patterson; Thomas J Givnish
Journal:  Evolution       Date:  2002-02       Impact factor: 3.694

3.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

4.  Molecular phylogenetic evidence for the monophyly of Fritillaria and Lilium (Liliaceae; Liliales) and the infrageneric classification of Fritillaria.

Authors:  Nina Rønsted; Steve Law; Hannah Thornton; Michael F Fay; Mark W Chase
Journal:  Mol Phylogenet Evol       Date:  2005-03-23       Impact factor: 4.286

5.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Authors:  Koichiro Tamura; Joel Dudley; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

6.  Chromosome diversity and evolution in Liliaceae.

Authors:  L Peruzzi; I J Leitch; K F Caparelli
Journal:  Ann Bot       Date:  2008-11-25       Impact factor: 4.357

7.  The morphology of somatic chromosomes in Lilium.

Authors:  R N STEWART
Journal:  Am J Bot       Date:  1947-01       Impact factor: 3.844

8.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

9.  A molecular phylogeny of Lilium in the internal transcribed spacer region of nuclear ribosomal DNA.

Authors:  T Nishikawa; K Okazaki; T Uchino; K Arakawa; T Nagamine
Journal:  J Mol Evol       Date:  1999-08       Impact factor: 2.395

10.  Phylogeny and biogeography of Aralia sect. Aralia (Araliaceae).

Authors:  J Wen; S Shi; R Jansen; E Zimmer
Journal:  Am J Bot       Date:  1998-06       Impact factor: 3.844

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  10 in total

1.  Molecular phylogeny and genetic variation in the genus Lilium native to China based on the internal transcribed spacer sequences of nuclear ribosomal DNA.

Authors:  Yun-peng Du; Heng-bin He; Zhong-xuan Wang; Shuang Li; Chi Wei; Xiao-na Yuan; Qi Cui; Gui-xia Jia
Journal:  J Plant Res       Date:  2013-11-09       Impact factor: 2.629

2.  A proposal for a multivariate quantitative approach to infer karyological relationships among taxa.

Authors:  Lorenzo Peruzzi; Fahim Altınordu
Journal:  Comp Cytogenet       Date:  2014-12-10       Impact factor: 1.800

3.  The Complete Chloroplast Genomes of Three Cardiocrinum (Liliaceae) Species: Comparative Genomic and Phylogenetic Analyses.

Authors:  Rui-Sen Lu; Pan Li; Ying-Xiong Qiu
Journal:  Front Plant Sci       Date:  2017-01-10       Impact factor: 5.753

4.  Genome Size Diversity in Lilium (Liliaceae) Is Correlated with Karyotype and Environmental Traits.

Authors:  Yun-Peng Du; Yu Bi; Ming-Fang Zhang; Feng-Ping Yang; Gui-Xia Jia; Xiu-Hai Zhang
Journal:  Front Plant Sci       Date:  2017-07-26       Impact factor: 5.753

5.  Re-emergence of Lilium callosum Sieb. et Zucc. in Taiwan after a fire allows propagation and renews the possibility of conservation.

Authors:  Ying Chun Chen; Yang Jung Huang; Chiu Mei Wang; Chin An Chiu; Huey Ling Lin; Pei Fang Lee; Ya Ming Cheng; Chen Chang
Journal:  Bot Stud       Date:  2017-11-13       Impact factor: 2.787

6.  Hybrid Speciation and Introgression Both Underlie the Genetic Structures and Evolutionary Relationships of Three Morphologically Distinct Species of Lilium (Liliaceae) Forming a Hybrid Zone Along an Elevational Gradient.

Authors:  Yundong Gao; A J Harris; Huaicheng Li; Xinfen Gao
Journal:  Front Plant Sci       Date:  2020-12-07       Impact factor: 5.753

7.  Comparative analysis of complete plastid genomes from Lilium lankongense Franchet and its closely related species and screening of Lilium-specific primers.

Authors:  Danmei Su; Fumin Xie; Haiying Liu; Dengfeng Xie; Juan Li; Xingjin He; Xianlin Guo; Songdong Zhou
Journal:  PeerJ       Date:  2021-03-05       Impact factor: 2.984

Review 8.  The Nuclear 35S rDNA World in Plant Systematics and Evolution: A Primer of Cautions and Common Misconceptions in Cytogenetic Studies.

Authors:  Josep A Rosselló; Alexis J Maravilla; Marcela Rosato
Journal:  Front Plant Sci       Date:  2022-02-24       Impact factor: 5.753

9.  Lilium spp. pollen in China (Liliaceae): taxonomic and phylogenetic implications and pollen evolution related to environmental conditions.

Authors:  Yun-peng Du; Chi Wei; Zhong-xuan Wang; Shuang Li; Heng-bin He; Gui-xia Jia
Journal:  PLoS One       Date:  2014-01-31       Impact factor: 3.240

10.  The contribution of cytogenetics and flow cytometry for understanding the karyotype evolution in three Dorstenia (Linnaeus, 1753) species (Moraceae).

Authors:  Paulo Marcos Amaral-Silva; Wellington Ronildo Clarindo; Tatiana Tavares Carrijo; Carlos Roberto Carvalho; Milene Miranda Praça-Fontes
Journal:  Comp Cytogenet       Date:  2016-01-22       Impact factor: 1.800

  10 in total

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