Literature DB >> 21554962

Penalized functional regression analysis of white-matter tract profiles in multiple sclerosis.

Jeff Goldsmith1, Ciprian M Crainiceanu, Brian S Caffo, Daniel S Reich.   

Abstract

Diffusion tensor imaging (DTI) enables noninvasive parcellation of cerebral white matter into its component fiber bundles or tracts. These tracts often subserve specific functions, and damage to the tracts can therefore result in characteristic forms of disability. Attempts to quantify the extent of tract-specific damage have been limited in part by substantial spatial variation of imaging properties from one end of a tract to the other, variation that can be compounded by the effects of disease. Here, we develop a "penalized functional regression" procedure to analyze spatially normalized tract profiles, which powerfully characterize such spatial variation. The central idea is to identify and emphasize portions of a tract that are more relevant to a clinical outcome score, such as case status or degree of disability. The procedure also yields a "tract abnormality score" for each tract and MRI index studied. Importantly, the weighting function used in this procedure is constrained to be smooth, and the statistical associations are estimated using generalized linear models. We test the method on data from a cross-sectional MRI and functional study of 115 multiple-sclerosis cases and 42 healthy volunteers, considering a range of quantitative MRI indices, white-matter tracts, and clinical outcome scores, and using training and testing sets to validate the results. We show that attention to spatial variation yields up to 15% (mean across all tracts and MRI indices: 6.4%) improvement in the ability to discriminate multiple sclerosis cases from healthy volunteers. Our results confirm that comprehensive analysis of white-matter tract-specific imaging data improves with knowledge and characterization of the normal spatial variation. Published by Elsevier Inc.

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Year:  2011        PMID: 21554962      PMCID: PMC3114268          DOI: 10.1016/j.neuroimage.2011.04.044

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  32 in total

1.  Diffusion tensor imaging and axonal tracking in the human brainstem.

Authors:  B Stieltjes; W E Kaufmann; P C van Zijl; K Fredericksen; G D Pearlson; M Solaiyappan; S Mori
Journal:  Neuroimage       Date:  2001-09       Impact factor: 6.556

2.  Use of combined conventional and quantitative MRI to quantify pathology related to cognitive impairment in multiple sclerosis.

Authors:  X Lin; C R Tench; P S Morgan; C S Constantinescu
Journal:  J Neurol Neurosurg Psychiatry       Date:  2007-08-02       Impact factor: 10.154

3.  A method for obtaining tract-specific diffusion tensor MRI measurements in the presence of disease: application to patients with clinically isolated syndromes suggestive of multiple sclerosis.

Authors:  E Pagani; M Filippi; M A Rocca; M A Horsfield
Journal:  Neuroimage       Date:  2005-02-25       Impact factor: 6.556

4.  PASTA: pointwise assessment of streamline tractography attributes.

Authors:  Derek K Jones; Adam R Travis; Greg Eden; Carlo Pierpaoli; Peter J Basser
Journal:  Magn Reson Med       Date:  2005-06       Impact factor: 4.668

5.  'Importance sampling' in MS: use of diffusion tensor tractography to quantify pathology related to specific impairment.

Authors:  Xia Lin; Christopher R Tench; Paul S Morgan; Graham Niepel; Cris S Constantinescu
Journal:  J Neurol Sci       Date:  2005-10-15       Impact factor: 3.181

Review 6.  Magnetic resonance imaging as a surrogate outcome measure of disability in multiple sclerosis: have we been overly harsh in our assessment?

Authors:  Douglas S Goodin
Journal:  Ann Neurol       Date:  2006-04       Impact factor: 10.422

7.  Damage to the optic radiation in multiple sclerosis is associated with retinal injury and visual disability.

Authors:  Daniel S Reich; Seth A Smith; Eliza M Gordon-Lipkin; Arzu Ozturk; Brian S Caffo; Laura J Balcer; Peter A Calabresi
Journal:  Arch Neurol       Date:  2009-08

8.  Multiple Sclerosis Severity Score: using disability and disease duration to rate disease severity.

Authors:  R H S R Roxburgh; S R Seaman; T Masterman; A E Hensiek; S J Sawcer; S Vukusic; I Achiti; C Confavreux; M Coustans; E le Page; G Edan; G V McDonnell; S Hawkins; M Trojano; M Liguori; E Cocco; M G Marrosu; F Tesser; M A Leone; A Weber; F Zipp; B Miterski; J T Epplen; A Oturai; P Soelberg Sørensen; E G Celius; N Téllez Lara; X Montalban; P Villoslada; A M Silva; M Marta; I Leite; B Dubois; J Rubio; H Butzkueven; T Kilpatrick; M P Mycko; K W Selmaj; M E Rio; M Sá; G Salemi; G Savettieri; J Hillert; D A S Compston
Journal:  Neurology       Date:  2005-04-12       Impact factor: 9.910

9.  Automated vs. conventional tractography in multiple sclerosis: variability and correlation with disability.

Authors:  Daniel S Reich; Arzu Ozturk; Peter A Calabresi; Susumu Mori
Journal:  Neuroimage       Date:  2009-11-26       Impact factor: 6.556

10.  Tract-based morphometry for white matter group analysis.

Authors:  Lauren J O'Donnell; Carl-Fredrik Westin; Alexandra J Golby
Journal:  Neuroimage       Date:  2008-12-25       Impact factor: 6.556

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  14 in total

1.  Longitudinal High-Dimensional Principal Components Analysis with Application to Diffusion Tensor Imaging of Multiple Sclerosis.

Authors:  Vadim Zipunnikov; Sonja Greven; Haochang Shou; Brian Caffo; Daniel S Reich; Ciprian Crainiceanu
Journal:  Ann Appl Stat       Date:  2014       Impact factor: 2.083

2.  Variable-Domain Functional Regression for Modeling ICU Data.

Authors:  Jonathan E Gellar; Elizabeth Colantuoni; Dale M Needham; Ciprian M Crainiceanu
Journal:  J Am Stat Assoc       Date:  2014-12-01       Impact factor: 5.033

3.  Parametrization of white matter manifold-like structures using principal surfaces.

Authors:  Chen Yue; Vadim Zipunnikov; Pierre-Louis Bazin; Dzung Pham; Daniel Reich; Ciprian Crainiceanu; Brian Caffo
Journal:  J Am Stat Assoc       Date:  2016-10-18       Impact factor: 5.033

4.  Bayesian scalar-on-image regression with application to association between intracranial DTI and cognitive outcomes.

Authors:  Lei Huang; Jeff Goldsmith; Philip T Reiss; Daniel S Reich; Ciprian M Crainiceanu
Journal:  Neuroimage       Date:  2013-06-17       Impact factor: 6.556

5.  Variable Selection in Generalized Functional Linear Models.

Authors:  J Gertheiss; A Maity; A-M Staicu
Journal:  Stat       Date:  2013

6.  Longitudinal Penalized Functional Regression for Cognitive Outcomes on Neuronal Tract Measurements.

Authors:  Jeff Goldsmith; Ciprian M Crainiceanu; Brian Caffo; Daniel Reich
Journal:  J R Stat Soc Ser C Appl Stat       Date:  2012-01-05       Impact factor: 1.864

7.  Scalar-on-function regression for predicting distal outcomes from intensively gathered longitudinal data: Interpretability for applied scientists.

Authors:  John J Dziak; Donna L Coffman; Matthew Reimherr; Justin Petrovich; Runze Li; Saul Shiffman; Mariya P Shiyko
Journal:  Stat Surv       Date:  2019-11-06

8.  Corrected confidence bands for functional data using principal components.

Authors:  J Goldsmith; S Greven; C Crainiceanu
Journal:  Biometrics       Date:  2012-09-24       Impact factor: 2.571

9.  Smooth Scalar-on-Image Regression via Spatial Bayesian Variable Selection.

Authors:  Jeff Goldsmith; Lei Huang; Ciprian M Crainiceanu
Journal:  J Comput Graph Stat       Date:  2014-01-01       Impact factor: 2.302

10.  VARYING COEFFICIENT MODEL FOR MODELING DIFFUSION TENSORS ALONG WHITE MATTER TRACTS.

Authors:  Ying Yuan; Hongtu Zhu; Martin Styner; John H Gilmore; J S Marron
Journal:  Ann Appl Stat       Date:  2013-03       Impact factor: 2.083

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