Literature DB >> 21549962

Accurate prostate volume estimation using multifeature active shape models on T2-weighted MRI.

Robert Toth1, B Nicolas Bloch, Elizabeth M Genega, Neil M Rofsky, Robert E Lenkinski, Mark A Rosen, Arjun Kalyanpur, Sona Pungavkar, Anant Madabhushi.   

Abstract

RATIONALE AND
OBJECTIVES: Accurate prostate volume estimation is useful for calculating prostate-specific antigen density and in evaluating posttreatment response. In the clinic, prostate volume estimation involves modeling the prostate as an ellipsoid or a spheroid from transrectal ultrasound, or T2-weighted magnetic resonance imaging (MRI). However, this requires some degree of manual intervention, and may not always yield accurate estimates. In this article, we present a multifeature active shape model (MFA) based segmentation scheme for estimating prostate volume from in vivo T2-weighted MRI.
MATERIALS AND METHODS: We aim to automatically determine the location of the prostate boundary on in vivo T2-weighted MRI, and subsequently determine the area of the prostate on each slice. The resulting planimetric areas are aggregated to yield the volume of the prostate for a given patient. Using a set of training images, the MFA learns the most discriminating statistical texture descriptors of the prostate boundary via a forward feature selection algorithm. After identification of the optimal image features, the MFA is deformed to accurately fit the prostate border. An expert radiologist segmented the prostate boundary on each slice and the planimetric aggregation of the enclosed areas yielded the ground truth prostate volume estimate. The volume estimation obtained via the MFA was then compared against volume estimations obtained via the ellipsoidal, Myschetzky, and prolated spheroids models.
RESULTS: We evaluated our MFA volume estimation method on a total 45 T2-weighted in vivo MRI studies, corresponding to both 1.5 Tesla and 3.0 Tesla field strengths. The results revealed that the ellipsoidal, Myschetzky, and prolate spheroid models overestimated prostate volumes, with volume fractions of 1.14, 1.53, and 1.96, respectively. By comparison, the MFA yielded a mean volume fraction of 1.05, evaluated using a fivefold cross-validation scheme. A correlation with the ground truth volume estimations showed that the MFA had an r(2) value of 0.82, whereas the clinical volume estimation schemes had a maximum value of 0.70.
CONCLUSIONS: Our MFA scheme involves minimal user intervention, is computationally efficient and results in volume estimations more accurate than state of the art clinical models.
Copyright © 2011 AUR. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21549962     DOI: 10.1016/j.acra.2011.01.016

Source DB:  PubMed          Journal:  Acad Radiol        ISSN: 1076-6332            Impact factor:   3.173


  8 in total

1.  Automated computer-derived prostate volumes from MR imaging data: comparison with radiologist-derived MR imaging and pathologic specimen volumes.

Authors:  Julie C Bulman; Robert Toth; Amish D Patel; B Nicolas Bloch; Colm J McMahon; Long Ngo; Anant Madabhushi; Neil M Rofsky
Journal:  Radiology       Date:  2012-01       Impact factor: 11.105

2.  Simultaneous Segmentation of Prostatic Zones Using Active Appearance Models With Multiple Coupled Levelsets.

Authors:  Robert Toth; Justin Ribault; John Gentile; Dan Sperling; Anant Madabhushi
Journal:  Comput Vis Image Underst       Date:  2013-09-01       Impact factor: 3.876

3.  Deformable segmentation of 3D MR prostate images via distributed discriminative dictionary and ensemble learning.

Authors:  Yanrong Guo; Yaozong Gao; Yeqin Shao; True Price; Aytekin Oto; Dinggang Shen
Journal:  Med Phys       Date:  2014-07       Impact factor: 4.071

4.  Evaluation of prostate segmentation algorithms for MRI: the PROMISE12 challenge.

Authors:  Geert Litjens; Robert Toth; Wendy van de Ven; Caroline Hoeks; Sjoerd Kerkstra; Bram van Ginneken; Graham Vincent; Gwenael Guillard; Neil Birbeck; Jindang Zhang; Robin Strand; Filip Malmberg; Yangming Ou; Christos Davatzikos; Matthias Kirschner; Florian Jung; Jing Yuan; Wu Qiu; Qinquan Gao; Philip Eddie Edwards; Bianca Maan; Ferdinand van der Heijden; Soumya Ghose; Jhimli Mitra; Jason Dowling; Dean Barratt; Henkjan Huisman; Anant Madabhushi
Journal:  Med Image Anal       Date:  2013-12-25       Impact factor: 8.545

5.  Deformable MR Prostate Segmentation via Deep Feature Learning and Sparse Patch Matching.

Authors:  Yanrong Guo; Yaozong Gao; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2015-12-11       Impact factor: 10.048

6.  SEMI-SUPERVISED LEARNING FOR PELVIC MR IMAGE SEGMENTATION BASED ON MULTI-TASK RESIDUAL FULLY CONVOLUTIONAL NETWORKS.

Authors:  Zishun Feng; Dong Nie; Li Wang; Dinggang Shen
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

7.  STRAINet: Spatially Varying sTochastic Residual AdversarIal Networks for MRI Pelvic Organ Segmentation.

Authors:  Dong Nie; Li Wang; Yaozong Gao; Jun Lian; Dinggang Shen
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2018-10-09       Impact factor: 10.451

8.  Fully automated multiorgan segmentation of female pelvic magnetic resonance images with coarse-to-fine convolutional neural network.

Authors:  Fatemeh Zabihollahy; Akila N Viswanathan; Ehud J Schmidt; Marc Morcos; Junghoon Lee
Journal:  Med Phys       Date:  2021-10-21       Impact factor: 4.071

  8 in total

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