Literature DB >> 21547300

Convergent strategies in biosynthesis.

Tohru Dairi1, Tomohisa Kuzuyama, Makoto Nishiyama, Isao Fujii.   

Abstract

This review article focuses on how nature sometimes solves the same problem in the biosynthesis of small molecules but using very different approaches. Four examples, involving isopentenyl diphosphate, menaquinone, lysine, and aromatic polyketides, are highlighted that represent different strategies in convergent metabolism.

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Year:  2011        PMID： 21547300     DOI： 10.1039/c0np00047g

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN： 0265-0568            Impact factor:   13.423


  14 in total

Review 1.  Radical S-adenosylmethionine (SAM) enzymes in cofactor biosynthesis: a treasure trove of complex organic radical rearrangement reactions.

Authors:  Angad P Mehta; Sameh H Abdelwahed; Nilkamal Mahanta; Dmytro Fedoseyenko; Benjamin Philmus; Lisa E Cooper; Yiquan Liu; Isita Jhulki; Steven E Ealick; Tadhg P Begley
Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

Review 2.  Oxidative Cyclization in Natural Product Biosynthesis.

Authors:  Man-Cheng Tang; Yi Zou; Kenji Watanabe; Christopher T Walsh; Yi Tang
Journal:  Chem Rev       Date:  2016-12-12       Impact factor: 60.622

Review 3.  Searching for potent and specific antibiotics against pathogenic Helicobacter and Campylobacter strains.

Authors:  Yasushi Ogasawara; Tohru Dairi
Journal:  J Ind Microbiol Biotechnol       Date:  2018-11-20       Impact factor: 3.346

4.  Different biosynthetic pathways to fosfomycin in Pseudomonas syringae and Streptomyces species.

Authors:  Seung Young Kim; Kou-San Ju; William W Metcalf; Bradley S Evans; Tomohisa Kuzuyama; Wilfred A van der Donk
Journal:  Antimicrob Agents Chemother       Date:  2012-05-21       Impact factor: 5.191

5.  Thiamin Diphosphate Activation in 1-Deoxy-d-xylulose 5-Phosphate Synthase: Insights into the Mechanism and Underlying Intermolecular Interactions.

Authors:  Justin K White; Sumit Handa; Sai Lakshmana Vankayala; David J Merkler; H Lee Woodcock
Journal:  J Phys Chem B       Date:  2016-09-12       Impact factor: 2.991

6.  Mechanistic studies of an IspH-catalyzed reaction: implications for substrate binding and protonation in the biosynthesis of isoprenoids.

Authors:  Wei-chen Chang; Youli Xiao; Hung-wen Liu; Pinghua Liu
Journal:  Angew Chem Int Ed Engl       Date:  2011-10-24       Impact factor: 15.336

7.  In vitro reconstitution of the radical S-adenosylmethionine enzyme MqnC involved in the biosynthesis of futalosine-derived menaquinone.

Authors:  Lisa E Cooper; Dmytro Fedoseyenko; Sameh H Abdelwahed; Soong-Hyun Kim; Tohru Dairi; Tadhg P Begley
Journal:  Biochemistry       Date:  2013-06-27       Impact factor: 3.162

Review 8.  C-C bond forming radical SAM enzymes involved in the construction of carbon skeletons of cofactors and natural products.

Authors:  Kenichi Yokoyama; Edward A Lilla
Journal:  Nat Prod Rep       Date:  2018-07-18       Impact factor: 13.423

9.  UniPathway: a resource for the exploration and annotation of metabolic pathways.

Authors:  Anne Morgat; Eric Coissac; Elisabeth Coudert; Kristian B Axelsen; Guillaume Keller; Amos Bairoch; Alan Bridge; Lydie Bougueleret; Ioannis Xenarios; Alain Viari
Journal:  Nucleic Acids Res       Date:  2011-11-18       Impact factor: 16.971

10.  Crystal structures of E. coli native MenH and two active site mutants.

Authors:  Jodie M Johnston; Ming Jiang; Zhihong Guo; Edward N Baker
Journal:  PLoS One       Date:  2013-04-18       Impact factor: 3.240
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