Literature DB >> 21543871

Crystallization and preliminary diffraction analysis of the CAL PDZ domain in complex with a selective peptide inhibitor.

Jeanine F Amacher1, Patrick R Cushing, Joshua A Weiner, Dean R Madden.   

Abstract

Cystic fibrosis (CF) is associated with loss-of-function mutations in the CF transmembrane conductance regulator (CFTR), which regulates epithelial fluid and ion homeostasis. The CFTR cytoplasmic C-terminus interacts with a number of PDZ (PSD-95/Dlg/ZO-1) proteins that modulate its intracellular trafficking and chloride-channel activity. Among these, the CFTR-associated ligand (CAL) has a negative effect on apical-membrane expression levels of the most common disease-associated mutant ΔF508-CFTR, making CAL a candidate target for the treatment of CF. A selective peptide inhibitor of the CAL PDZ domain (iCAL36) has recently been developed and shown to stabilize apical expression of ΔF508-CFTR, enhancing net chloride-channel activity, both alone and in combination with the folding corrector corr-4a. As a basis for structural studies of the CAL-iCAL36 interaction, a purification protocol has been developed that increases the oligomeric homogeneity of the protein. Here, the cocrystallization of the complex in space group P2(1)2(1)2(1), with unit-cell parameters a = 35.9, b = 47.7, c = 97.3 Å, is reported. The crystals diffracted to 1.4 Å resolution. Based on the calculated Matthews coefficient (1.96 Å(3) Da(-1)), it appears that the asymmetric unit contains two complexes.

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Year:  2011        PMID: 21543871      PMCID: PMC3087650          DOI: 10.1107/S1744309111009985

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  21 in total

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Journal:  J Biol Chem       Date:  2003-09-03       Impact factor: 5.157

4.  Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.

Authors:  Katherine A Kantardjieff; Bernhard Rupp
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

5.  Association of the cystic fibrosis transmembrane regulator with CAL: structural features and molecular dynamics.

Authors:  Andrea Piserchio; Abigail Fellows; Dean R Madden; Dale F Mierke
Journal:  Biochemistry       Date:  2005-12-13       Impact factor: 3.162

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  7 in total

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2.  Optimization of the process of inverted peptides (PIPEPLUS) to screen PDZ domain ligands.

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3.  Highway to Cell: Selection of the Best Cell-Penetrating Peptide to Internalize the CFTR-Stabilizing iCAL36 Peptide.

Authors:  Quentin Seisel; Israpong Lakumpa; Emilie Josse; Eric Vivès; Jessica Varilh; Magali Taulan-Cadars; Prisca Boisguérin
Journal:  Pharmaceutics       Date:  2022-04-07       Impact factor: 6.525

4.  Stereochemical preferences modulate affinity and selectivity among five PDZ domains that bind CFTR: comparative structural and sequence analyses.

Authors:  Jeanine F Amacher; Patrick R Cushing; Lionel Brooks; Prisca Boisguerin; Dean R Madden
Journal:  Structure       Date:  2013-11-07       Impact factor: 5.006

5.  Stereochemical determinants of C-terminal specificity in PDZ peptide-binding domains: a novel contribution of the carboxylate-binding loop.

Authors:  Jeanine F Amacher; Patrick R Cushing; Christopher D Bahl; Tobias Beck; Dean R Madden
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6.  Chemically modified peptide scaffolds target the CFTR-associated ligand PDZ domain.

Authors:  Jeanine F Amacher; Ruizhi Zhao; Mark R Spaller; Dean R Madden
Journal:  PLoS One       Date:  2014-08-19       Impact factor: 3.240

7.  Ubiquitination and degradation of CFTR by the E3 ubiquitin ligase MARCH2 through its association with adaptor proteins CAL and STX6.

Authors:  Jie Cheng; William Guggino
Journal:  PLoS One       Date:  2013-06-20       Impact factor: 3.240

  7 in total

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