Literature DB >> 21527778

Transcription initiation from within P elements generates hypomorphic mutations in Drosophila melanogaster.

Matthew C LaFave1, Jeff Sekelsky.   

Abstract

Numerous transposable element insertions in Drosophila melanogaster cause hypomorphic mutations. We report that transcription initiation within a region found in many P-element constructs provides an explanation for why some gene function is retained. We detected evidence of this transcription in four different types of P constructs, regardless of whether the insertion was in a coding exon, intron, 5' untranslated region, or upstream of the gene span.

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Year:  2011        PMID: 21527778      PMCID: PMC3176530          DOI: 10.1534/genetics.111.129825

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  9 in total

1.  Drosophila stem loop binding protein coordinates accumulation of mature histone mRNA with cell cycle progression.

Authors:  E Sullivan; C Santiago; E D Parker; Z Dominski; X Yang; D J Lanzotti; T C Ingledue; W F Marzluff; R J Duronio
Journal:  Genes Dev       Date:  2001-01-15       Impact factor: 11.361

2.  mRNA destabilization triggered by premature translational termination depends on at least three cis-acting sequence elements and one trans-acting factor.

Authors:  S W Peltz; A H Brown; A Jacobson
Journal:  Genes Dev       Date:  1993-09       Impact factor: 11.361

3.  Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways.

Authors:  David Gatfield; Leonie Unterholzner; Francesca D Ciccarelli; Peer Bork; Elisa Izaurralde
Journal:  EMBO J       Date:  2003-08-01       Impact factor: 11.598

4.  DNA damage responses in Drosophila nbs mutants with reduced or altered NBS function.

Authors:  Sushmita Mukherjee; Matthew C LaFave; Jeff Sekelsky
Journal:  DNA Repair (Amst)       Date:  2009-04-22

5.  A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac.

Authors:  Stephen T Thibault; Matthew A Singer; Wesley Y Miyazaki; Brett Milash; Nicholas A Dompe; Carol M Singh; Ross Buchholz; Madelyn Demsky; Robert Fawcett; Helen L Francis-Lang; Lisa Ryner; Lai Man Cheung; Angela Chong; Cathy Erickson; William W Fisher; Kimberly Greer; Stephanie R Hartouni; Elizabeth Howie; Lakshmi Jakkula; Daniel Joo; Keith Killpack; Alex Laufer; Julie Mazzotta; Ronald D Smith; Lynn M Stevens; Christiana Stuber; Lory R Tan; Richard Ventura; Alesa Woo; Irena Zakrajsek; Lora Zhao; Feng Chen; Candace Swimmer; Casey Kopczynski; Geoffrey Duyk; Margaret L Winberg; Jonathan Margolis
Journal:  Nat Genet       Date:  2004-02-22       Impact factor: 38.330

6.  The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes.

Authors:  Hugo J Bellen; Robert W Levis; Guochun Liao; Yuchun He; Joseph W Carlson; Garson Tsang; Martha Evans-Holm; P Robin Hiesinger; Karen L Schulze; Gerald M Rubin; Roger A Hoskins; Allan C Spradling
Journal:  Genetics       Date:  2004-06       Impact factor: 4.562

Review 7.  Gene disruptions using P transposable elements: an integral component of the Drosophila genome project.

Authors:  A C Spradling; D M Stern; I Kiss; J Roote; T Laverty; G M Rubin
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

8.  Unlocking the secrets of the genome.

Authors:  Susan E Celniker; Laura A L Dillon; Mark B Gerstein; Kristin C Gunsalus; Steven Henikoff; Gary H Karpen; Manolis Kellis; Eric C Lai; Jason D Lieb; David M MacAlpine; Gos Micklem; Fabio Piano; Michael Snyder; Lincoln Stein; Kevin P White; Robert H Waterston
Journal:  Nature       Date:  2009-06-18       Impact factor: 49.962

9.  FlyBase: enhancing Drosophila Gene Ontology annotations.

Authors:  Susan Tweedie; Michael Ashburner; Kathleen Falls; Paul Leyland; Peter McQuilton; Steven Marygold; Gillian Millburn; David Osumi-Sutherland; Andrew Schroeder; Ruth Seal; Haiyan Zhang
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  9 in total
  10 in total

1.  A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors.

Authors:  Dominik Handler; Daniel Olivieri; Maria Novatchkova; Franz Sebastian Gruber; Katharina Meixner; Karl Mechtler; Alexander Stark; Ravi Sachidanandam; Julius Brennecke
Journal:  EMBO J       Date:  2011-08-23       Impact factor: 11.598

2.  The Notch ligand E3 ligase, Mind Bomb1, regulates glutamate receptor localization in Drosophila.

Authors:  Morgan Sturgeon; Dustin Davis; Amanda Albers; Derek Beatty; Rik Austin; Matt Ferguson; Brittany Tounsel; Faith L W Liebl
Journal:  Mol Cell Neurosci       Date:  2015-11-17       Impact factor: 4.314

3.  A region of SLBP outside the mRNA-processing domain is essential for deposition of histone mRNA into the Drosophila egg.

Authors:  Jennifer Michelle Potter-Birriel; Graydon B Gonsalvez; William F Marzluff
Journal:  J Cell Sci       Date:  2021-02-11       Impact factor: 5.285

4.  The arouser EPS8L3 gene is critical for normal memory in Drosophila.

Authors:  Holly LaFerriere; Daniela Ostrowski; Douglas J Guarnieri; Troy Zars
Journal:  PLoS One       Date:  2011-07-27       Impact factor: 3.240

5.  Defining components of the ß-catenin destruction complex and exploring its regulation and mechanisms of action during development.

Authors:  David M Roberts; Mira I Pronobis; Kelly M Alexandre; Gregory C Rogers; John S Poulton; Daniel E Schneider; Kuo-Chen Jung; Daniel J McKay; Mark Peifer
Journal:  PLoS One       Date:  2012-02-16       Impact factor: 3.240

6.  A transposable element insertion confers xenobiotic resistance in Drosophila.

Authors:  Lidia Mateo; Anna Ullastres; Josefa González
Journal:  PLoS Genet       Date:  2014-08-14       Impact factor: 5.917

7.  Rapid generation of hypomorphic mutations.

Authors:  Laura L Arthur; Joyce J Chung; Preetam Jankirama; Kathryn M Keefer; Igor Kolotilin; Slavica Pavlovic-Djuranovic; Douglas L Chalker; Vojislava Grbic; Rachel Green; Rima Menassa; Heather L True; James B Skeath; Sergej Djuranovic
Journal:  Nat Commun       Date:  2017-01-20       Impact factor: 14.919

Review 8.  Chemical mutagens, transposons, and transgenes to interrogate gene function in Drosophila melanogaster.

Authors:  Koen J T Venken; Hugo J Bellen
Journal:  Methods       Date:  2014-02-28       Impact factor: 3.608

9.  Disruption of the protein kinase N gene of drosophila melanogaster results in the recessive delorean allele (pkndln) with a negative impact on wing morphogenesis.

Authors:  Georgette L Sass; Bruce D Ostrow
Journal:  G3 (Bethesda)       Date:  2014-04-16       Impact factor: 3.154

10.  Gene dosage effects of poly(A) track-engineered hypomorphs.

Authors:  Geralle Powell; Slavica Pavlovic Djuranovic; Sergej Djuranovic
Journal:  Mol Ther Nucleic Acids       Date:  2021-10-08       Impact factor: 8.886

  10 in total

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