Literature DB >> 21523152

5-Chloro-2-(4-fluoro-phen-yl)-3-phenyl-sulfinyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(20)H(12)ClFO(2)S, the O atom and the phenyl ring of the phenyl-sulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment; the phenyl ring is almost perpendicular to this plane [82.44 (5)°]. The 4-fluoro-phenyl ring is rotated out of the benzofuran plane, making a dihedral angle of 20.83 (6)°.

Entities:  

Year:  2011        PMID: 21523152      PMCID: PMC3051701          DOI: 10.1107/S1600536811002686

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For our previous structural studies of related 5-halo-2-phenyl-3-phenyl­sulfinyl-1-benzofuran derivatives, see: Choi et al. (2009 ▶).

Experimental

Crystal data

C20H12ClFO2S M = 370.81 Triclinic, a = 8.2551 (2) Å b = 9.4707 (3) Å c = 11.4914 (3) Å α = 71.403 (2)° β = 81.707 (2)° γ = 71.909 (2)° V = 808.39 (4) Å3 Z = 2 Mo Kα radiation μ = 0.39 mm−1 T = 173 K 0.17 × 0.15 × 0.06 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.935, T max = 0.978 14335 measured reflections 3722 independent reflections 2943 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.096 S = 1.04 3722 reflections 226 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.35 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811002686/rn2082sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002686/rn2082Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H12ClFO2SZ = 2
Mr = 370.81F(000) = 380
Triclinic, P1Dx = 1.523 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.2551 (2) ÅCell parameters from 5406 reflections
b = 9.4707 (3) Åθ = 2.6–27.3°
c = 11.4914 (3) ŵ = 0.39 mm1
α = 71.403 (2)°T = 173 K
β = 81.707 (2)°Block, colourless
γ = 71.909 (2)°0.17 × 0.15 × 0.06 mm
V = 808.39 (4) Å3
Bruker SMART APEXII CCD diffractometer3722 independent reflections
Radiation source: rotating anode2943 reflections with I > 2σ(I)
graphite multilayerRint = 0.031
Detector resolution: 10.0 pixels mm-1θmax = 27.7°, θmin = 1.9°
φ and ω scansh = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −12→12
Tmin = 0.935, Tmax = 0.978l = −15→14
14335 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: difference Fourier map
wR(F2) = 0.096H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0461P)2 + 0.1974P] where P = (Fo2 + 2Fc2)/3
3722 reflections(Δ/σ)max = 0.001
226 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.35 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.03501 (6)0.73080 (5)0.38102 (4)0.04197 (14)
S10.62029 (5)0.60069 (5)0.86187 (4)0.03045 (12)
F10.03640 (16)1.10463 (14)1.14539 (11)0.0571 (3)
O10.52873 (15)1.05149 (12)0.68603 (10)0.0308 (3)
O20.79096 (15)0.50153 (14)0.83462 (13)0.0435 (3)
C10.6061 (2)0.79137 (18)0.76450 (15)0.0268 (3)
C20.6984 (2)0.82981 (18)0.64745 (15)0.0273 (3)
C30.8176 (2)0.74611 (19)0.57773 (15)0.0293 (4)
H30.85420.63580.60370.035*
C40.8803 (2)0.8308 (2)0.46888 (16)0.0314 (4)
C50.8269 (2)0.9928 (2)0.42678 (16)0.0352 (4)
H50.87341.04590.35100.042*
C60.7069 (2)1.0758 (2)0.49497 (16)0.0338 (4)
H60.66791.18600.46790.041*
C70.6461 (2)0.99115 (18)0.60439 (15)0.0279 (3)
C80.5071 (2)0.92768 (18)0.78381 (15)0.0278 (3)
C90.3831 (2)0.97013 (19)0.88009 (15)0.0283 (4)
C100.2638 (2)1.1155 (2)0.85298 (17)0.0378 (4)
H100.26321.18420.77200.045*
C110.1463 (2)1.1617 (2)0.94148 (18)0.0434 (5)
H110.06511.26110.92270.052*
C120.1501 (2)1.0603 (2)1.05693 (17)0.0388 (4)
C130.2645 (2)0.9155 (2)1.08844 (17)0.0391 (4)
H130.26340.84791.16970.047*
C140.3814 (2)0.8707 (2)0.99897 (16)0.0347 (4)
H140.46160.77081.01880.042*
C150.4679 (2)0.56305 (17)0.78808 (15)0.0274 (3)
C160.2970 (2)0.6120 (2)0.82334 (17)0.0340 (4)
H160.26210.66600.88370.041*
C170.1781 (2)0.5810 (2)0.7692 (2)0.0449 (5)
H170.06020.61430.79190.054*
C180.2304 (3)0.5017 (2)0.6824 (2)0.0478 (5)
H180.14810.48090.64520.057*
C190.4007 (3)0.4522 (2)0.64904 (19)0.0470 (5)
H190.43550.39700.58950.056*
C200.5211 (2)0.48253 (19)0.70198 (17)0.0371 (4)
H200.63890.44850.67940.045*
U11U22U33U12U13U23
Cl10.0389 (3)0.0426 (3)0.0377 (3)−0.0065 (2)0.01078 (19)−0.0129 (2)
S10.0269 (2)0.0251 (2)0.0310 (2)−0.00523 (17)−0.00234 (17)0.00144 (17)
F10.0572 (8)0.0530 (7)0.0476 (7)−0.0058 (6)0.0243 (6)−0.0174 (6)
O10.0347 (6)0.0239 (6)0.0285 (6)−0.0075 (5)0.0045 (5)−0.0038 (5)
O20.0259 (6)0.0327 (7)0.0566 (9)0.0006 (5)−0.0028 (6)−0.0010 (6)
C10.0249 (8)0.0252 (8)0.0264 (8)−0.0072 (6)−0.0010 (6)−0.0022 (6)
C20.0248 (8)0.0263 (8)0.0282 (8)−0.0087 (7)−0.0020 (6)−0.0027 (7)
C30.0259 (8)0.0259 (8)0.0325 (9)−0.0060 (7)−0.0008 (7)−0.0053 (7)
C40.0275 (8)0.0349 (9)0.0301 (9)−0.0072 (7)0.0023 (7)−0.0101 (7)
C50.0367 (9)0.0359 (9)0.0288 (9)−0.0132 (8)0.0055 (7)−0.0040 (7)
C60.0378 (10)0.0268 (8)0.0314 (9)−0.0097 (7)0.0020 (7)−0.0023 (7)
C70.0281 (8)0.0253 (8)0.0279 (8)−0.0072 (7)0.0006 (7)−0.0061 (7)
C80.0274 (8)0.0262 (8)0.0261 (8)−0.0096 (7)−0.0009 (7)−0.0010 (6)
C90.0263 (8)0.0285 (8)0.0296 (9)−0.0094 (7)0.0009 (7)−0.0074 (7)
C100.0354 (9)0.0332 (9)0.0343 (10)−0.0046 (8)0.0026 (8)−0.0025 (8)
C110.0384 (10)0.0351 (10)0.0450 (11)−0.0021 (8)0.0072 (9)−0.0078 (9)
C120.0358 (10)0.0411 (10)0.0389 (10)−0.0118 (8)0.0117 (8)−0.0160 (8)
C130.0444 (11)0.0379 (10)0.0296 (9)−0.0132 (8)0.0057 (8)−0.0045 (8)
C140.0364 (9)0.0284 (9)0.0329 (9)−0.0055 (7)0.0013 (7)−0.0051 (7)
C150.0277 (8)0.0194 (7)0.0286 (8)−0.0054 (6)0.0018 (7)−0.0008 (6)
C160.0289 (9)0.0309 (9)0.0382 (10)−0.0064 (7)0.0030 (7)−0.0089 (8)
C170.0298 (9)0.0388 (11)0.0615 (13)−0.0084 (8)−0.0043 (9)−0.0089 (10)
C180.0532 (13)0.0326 (10)0.0604 (13)−0.0146 (9)−0.0191 (11)−0.0078 (9)
C190.0673 (14)0.0312 (10)0.0445 (11)−0.0142 (10)−0.0020 (10)−0.0136 (9)
C200.0381 (10)0.0257 (9)0.0415 (10)−0.0064 (8)0.0075 (8)−0.0084 (8)
Cl1—C41.7422 (17)C9—C101.391 (2)
S1—O21.4845 (13)C10—C111.379 (3)
S1—C11.7732 (16)C10—H100.9500
S1—C151.7911 (17)C11—C121.365 (3)
F1—C121.358 (2)C11—H110.9500
O1—C71.3717 (19)C12—C131.371 (3)
O1—C81.3788 (19)C13—C141.381 (2)
C1—C81.363 (2)C13—H130.9500
C1—C21.445 (2)C14—H140.9500
C2—C31.390 (2)C15—C201.379 (2)
C2—C71.391 (2)C15—C161.385 (2)
C3—C41.381 (2)C16—C171.381 (3)
C3—H30.9500C16—H160.9500
C4—C51.396 (2)C17—C181.379 (3)
C5—C61.378 (2)C17—H170.9500
C5—H50.9500C18—C191.376 (3)
C6—C71.379 (2)C18—H180.9500
C6—H60.9500C19—C201.380 (3)
C8—C91.461 (2)C19—H190.9500
C9—C141.391 (2)C20—H200.9500
O2—S1—C1106.64 (7)C11—C10—H10119.4
O2—S1—C15107.22 (8)C9—C10—H10119.4
C1—S1—C1596.93 (7)C12—C11—C10118.01 (17)
C7—O1—C8106.94 (12)C12—C11—H11121.0
C8—C1—C2107.22 (14)C10—C11—H11121.0
C8—C1—S1127.42 (13)F1—C12—C11118.74 (17)
C2—C1—S1125.36 (12)F1—C12—C13118.13 (17)
C3—C2—C7119.50 (15)C11—C12—C13123.13 (17)
C3—C2—C1135.44 (15)C12—C13—C14118.27 (17)
C7—C2—C1105.05 (14)C12—C13—H13120.9
C4—C3—C2116.85 (15)C14—C13—H13120.9
C4—C3—H3121.6C13—C14—C9120.76 (16)
C2—C3—H3121.6C13—C14—H14119.6
C3—C4—C5123.08 (16)C9—C14—H14119.6
C3—C4—Cl1118.37 (13)C20—C15—C16121.39 (17)
C5—C4—Cl1118.54 (13)C20—C15—S1120.46 (13)
C6—C5—C4120.11 (16)C16—C15—S1118.11 (13)
C6—C5—H5119.9C17—C16—C15118.85 (17)
C4—C5—H5119.9C17—C16—H16120.6
C5—C6—C7116.72 (15)C15—C16—H16120.6
C5—C6—H6121.6C18—C17—C16120.02 (19)
C7—C6—H6121.6C18—C17—H17120.0
O1—C7—C6125.76 (14)C16—C17—H17120.0
O1—C7—C2110.51 (14)C19—C18—C17120.58 (19)
C6—C7—C2123.72 (16)C19—C18—H18119.7
C1—C8—O1110.27 (14)C17—C18—H18119.7
C1—C8—C9135.02 (15)C18—C19—C20120.14 (19)
O1—C8—C9114.67 (14)C18—C19—H19119.9
C14—C9—C10118.60 (16)C20—C19—H19119.9
C14—C9—C8122.21 (15)C15—C20—C19119.01 (18)
C10—C9—C8119.19 (15)C15—C20—H20120.5
C11—C10—C9121.23 (17)C19—C20—H20120.5
O2—S1—C1—C8−154.59 (15)C7—O1—C8—C9−179.06 (13)
C15—S1—C1—C895.06 (16)C1—C8—C9—C1422.4 (3)
O2—S1—C1—C226.14 (16)O1—C8—C9—C14−160.06 (15)
C15—S1—C1—C2−84.21 (15)C1—C8—C9—C10−158.49 (19)
C8—C1—C2—C3179.31 (18)O1—C8—C9—C1019.1 (2)
S1—C1—C2—C3−1.3 (3)C14—C9—C10—C110.4 (3)
C8—C1—C2—C70.04 (18)C8—C9—C10—C11−178.78 (17)
S1—C1—C2—C7179.44 (12)C9—C10—C11—C12−0.1 (3)
C7—C2—C3—C41.3 (2)C10—C11—C12—F1179.39 (17)
C1—C2—C3—C4−177.90 (17)C10—C11—C12—C13−0.1 (3)
C2—C3—C4—C5−1.2 (3)F1—C12—C13—C14−179.41 (16)
C2—C3—C4—Cl1177.97 (12)C11—C12—C13—C140.1 (3)
C3—C4—C5—C60.3 (3)C12—C13—C14—C90.1 (3)
Cl1—C4—C5—C6−178.87 (14)C10—C9—C14—C13−0.4 (3)
C4—C5—C6—C70.5 (3)C8—C9—C14—C13178.74 (16)
C8—O1—C7—C6−178.57 (16)O2—S1—C15—C20−13.01 (16)
C8—O1—C7—C20.94 (18)C1—S1—C15—C2096.85 (14)
C5—C6—C7—O1179.02 (16)O2—S1—C15—C16164.67 (12)
C5—C6—C7—C2−0.4 (3)C1—S1—C15—C16−85.46 (14)
C3—C2—C7—O1179.98 (14)C20—C15—C16—C17−1.0 (2)
C1—C2—C7—O1−0.61 (18)S1—C15—C16—C17−178.63 (14)
C3—C2—C7—C6−0.5 (3)C15—C16—C17—C180.4 (3)
C1—C2—C7—C6178.91 (16)C16—C17—C18—C190.3 (3)
C2—C1—C8—O10.54 (18)C17—C18—C19—C20−0.4 (3)
S1—C1—C8—O1−178.84 (11)C16—C15—C20—C190.8 (3)
C2—C1—C8—C9178.16 (17)S1—C15—C20—C19178.43 (14)
S1—C1—C8—C9−1.2 (3)C18—C19—C20—C15−0.1 (3)
C7—O1—C8—C1−0.91 (18)
  8 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  5-Iodo-2-phenyl-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-11

6.  5-Chloro-2-phenyl-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-22

7.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

8.  5-Bromo-2-phenyl-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03
  8 in total
  4 in total

1.  5-Bromo-2-(4-fluoro-phen-yl)-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-17

2.  2-(4-Fluoro-phen-yl)-5-iodo-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-27

3.  5-Fluoro-2-(4-fluoro-phen-yl)-7-methyl-3-phenyl-sulfinyl-1-benzo-furan.

Authors:  Pil Ja Seo; Hong Dae Choi; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-06-29

4.  5-Cyclo-hexyl-2-(4-fluoro-phen-yl)-3-phenyl-sulfinyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-21
  4 in total

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