| Literature DB >> 21523149 |
Lina Wang1, Xiangrong Liu, Chun Yang, Shunsheng Zhao, Kanshe Li.
Abstract
The title compound, C(5)H(7)N(3)O, was obtained by the reaction of ethyl 1H-pyrrol-2-carboxyl-ate and hydrazide hydrate. In the crystal, mol-ecules are linked via inter-molecular N-H⋯N and N-H⋯O hydrogen bonds, forming a supra-molecular grid.Entities:
Year: 2011 PMID: 21523149 PMCID: PMC3051602 DOI: 10.1107/S1600536811002650
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H7N3O | |
| Mo | |
| Orthorhombic, | Cell parameters from 990 reflections |
| θ = 3.0–22.4° | |
| µ = 0.11 mm−1 | |
| Block, colourless | |
| 0.31 × 0.28 × 0.16 mm | |
| Bruker APEXII CCD diffractometer | 1043 independent reflections |
| Radiation source: fine-focus sealed tube | 758 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 5327 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1043 reflections | (Δ/σ)max < 0.001 |
| 90 parameters | Δρmax = 0.16 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.55417 (12) | 0.04787 (18) | 0.64606 (11) | 0.0469 (5) | |
| H1 | 0.6352 | 0.0752 | 0.6332 | 0.056* | |
| N2 | 0.34109 (14) | 0.28224 (17) | 0.48978 (11) | 0.0495 (5) | |
| H2 | 0.2667 | 0.2414 | 0.5087 | 0.059* | |
| N3 | 0.33807 (16) | 0.3955 (2) | 0.41573 (15) | 0.0551 (5) | |
| O1 | 0.56366 (11) | 0.29286 (15) | 0.50912 (10) | 0.0538 (5) | |
| C1 | 0.5178 (2) | −0.0654 (2) | 0.71020 (14) | 0.0523 (5) | |
| H1A | 0.5761 | −0.1266 | 0.7470 | 0.063* | |
| C2 | 0.3816 (2) | −0.0744 (2) | 0.71164 (14) | 0.0544 (6) | |
| H2A | 0.3304 | −0.1421 | 0.7495 | 0.065* | |
| C3 | 0.33310 (17) | 0.0371 (2) | 0.64571 (14) | 0.0510 (6) | |
| H3 | 0.2435 | 0.0573 | 0.6318 | 0.061* | |
| C4 | 0.44238 (15) | 0.1116 (2) | 0.60516 (13) | 0.0418 (5) | |
| C5 | 0.45432 (16) | 0.2352 (2) | 0.53214 (13) | 0.0423 (5) | |
| H3A | 0.394 (3) | 0.359 (3) | 0.3665 (19) | 0.086 (8)* | |
| H3B | 0.380 (3) | 0.483 (3) | 0.4387 (19) | 0.095 (9)* |
| N1 | 0.0320 (8) | 0.0562 (10) | 0.0526 (10) | −0.0009 (7) | 0.0010 (6) | 0.0026 (8) |
| N2 | 0.0285 (8) | 0.0569 (10) | 0.0631 (10) | −0.0010 (6) | 0.0003 (6) | 0.0119 (8) |
| N3 | 0.0383 (10) | 0.0595 (12) | 0.0674 (12) | −0.0003 (8) | −0.0021 (8) | 0.0121 (10) |
| O1 | 0.0304 (8) | 0.0574 (9) | 0.0737 (10) | −0.0019 (5) | 0.0016 (6) | 0.0054 (7) |
| C1 | 0.0483 (11) | 0.0604 (12) | 0.0481 (11) | 0.0021 (9) | −0.0002 (8) | 0.0056 (10) |
| C2 | 0.0455 (12) | 0.0631 (13) | 0.0545 (12) | −0.0060 (9) | 0.0063 (9) | 0.0041 (10) |
| C3 | 0.0357 (10) | 0.0618 (12) | 0.0554 (12) | −0.0037 (9) | 0.0001 (8) | −0.0008 (10) |
| C4 | 0.0336 (9) | 0.0469 (11) | 0.0447 (10) | −0.0001 (7) | −0.0003 (7) | −0.0048 (8) |
| C5 | 0.0319 (10) | 0.0452 (10) | 0.0497 (11) | 0.0003 (8) | 0.0005 (7) | −0.0091 (9) |
| N1—C1 | 1.356 (2) | O1—C5 | 1.2380 (18) |
| N1—C4 | 1.362 (2) | C1—C2 | 1.361 (3) |
| N1—H1 | 0.8600 | C1—H1A | 0.9300 |
| N2—C5 | 1.332 (2) | C2—C3 | 1.399 (3) |
| N2—N3 | 1.402 (2) | C2—H2A | 0.9300 |
| N2—H2 | 0.8600 | C3—C4 | 1.380 (2) |
| N3—H3A | 0.93 (3) | C3—H3 | 0.9300 |
| N3—H3B | 0.91 (3) | C4—C5 | 1.459 (3) |
| C1—N1—C4 | 109.41 (15) | C1—C2—C3 | 107.33 (17) |
| C1—N1—H1 | 125.3 | C1—C2—H2A | 126.3 |
| C4—N1—H1 | 125.3 | C3—C2—H2A | 126.3 |
| C5—N2—N3 | 122.74 (15) | C4—C3—C2 | 107.48 (16) |
| C5—N2—H2 | 118.6 | C4—C3—H3 | 126.3 |
| N3—N2—H2 | 118.6 | C2—C3—H3 | 126.3 |
| N2—N3—H3A | 106.1 (15) | N1—C4—C3 | 107.30 (17) |
| N2—N3—H3B | 108.1 (17) | N1—C4—C5 | 120.28 (14) |
| H3A—N3—H3B | 104 (2) | C3—C4—C5 | 132.42 (15) |
| N1—C1—C2 | 108.47 (17) | O1—C5—N2 | 121.13 (18) |
| N1—C1—H1A | 125.8 | O1—C5—C4 | 122.32 (15) |
| C2—C1—H1A | 125.8 | N2—C5—C4 | 116.54 (15) |
| C4—N1—C1—C2 | −0.5 (2) | N3—N2—C5—O1 | 1.6 (3) |
| N1—C1—C2—C3 | 0.2 (2) | N3—N2—C5—C4 | −177.42 (17) |
| C1—C2—C3—C4 | 0.2 (2) | N1—C4—C5—O1 | −4.4 (3) |
| C1—N1—C4—C3 | 0.6 (2) | C3—C4—C5—O1 | 175.93 (18) |
| C1—N1—C4—C5 | −179.09 (15) | N1—C4—C5—N2 | 174.58 (16) |
| C2—C3—C4—N1 | −0.5 (2) | C3—C4—C5—N2 | −5.1 (3) |
| C2—C3—C4—C5 | 179.19 (19) |
| H··· | ||||
| N1—H1···N3i | 0.86 | 2.15 | 2.996 (2) | 169 |
| N2—H2···O1ii | 0.86 | 2.06 | 2.8422 (19) | 151 |
| N3—H3B···O1iii | 0.91 (3) | 2.12 (3) | 3.023 (3) | 168 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯N3i | 0.86 | 2.15 | 2.996 (2) | 169 |
| N2—H2⋯O1ii | 0.86 | 2.06 | 2.8422 (19) | 151 |
| N3—H3 | 0.91 (3) | 2.12 (3) | 3.023 (3) | 168 (2) |
Symmetry codes: (i) ; (ii) ; (iii) .