| Literature DB >> 21523136 |
Long Liu, Chunlin He, Zengxi Li, Chunshan Li, Xiangping Zhang, Suojiang Zhang.
Abstract
In the title compound, C(5)H(5)N(3)O(3), the nitro group is twisted with respect to the amide group, with C-N-N-O torsion angles of 29.0 (2) and -153.66 (14)°. In the crystal, mol-ecules are linked through inter-molecular N-H⋯O and C-H⋯O hydrogen bonds, forming supra-molecular chains along the a axis. These chains stack in parallel and form distinct layer motifs in the (001) plane.Entities:
Year: 2011 PMID: 21523136 PMCID: PMC3051632 DOI: 10.1107/S1600536811002455
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H5N3O3 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3166 reflections |
| θ = 3.2–27.5° | |
| µ = 0.14 mm−1 | |
| Platelet, colourless | |
| 0.47 × 0.43 × 0.20 mm |
| Rigaku AFC10/Saturn724+ diffractometer | 1214 reflections with |
| Radiation source: Rotating Anode | |
| graphite | θmax = 27.5°, θmin = 3.9° |
| Detector resolution: 28.5714 pixels mm-1 | |
| φ and ω scans | |
| 8849 measured reflections | |
| 1402 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1402 reflections | (Δ/σ)max < 0.001 |
| 108 parameters | Δρmax = 0.34 e Å−3 |
| 0 restraints | Δρmin = −0.15 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.17512 (12) | 0.34028 (18) | 0.50500 (5) | 0.0219 (3) | |
| O2 | 0.27334 (11) | 0.3909 (2) | 0.37665 (6) | 0.0256 (3) | |
| O3 | 0.45611 (12) | 0.21230 (19) | 0.36431 (6) | 0.0255 (3) | |
| N1 | 0.25340 (14) | 0.3489 (2) | 0.64493 (7) | 0.0207 (3) | |
| N2 | 0.39562 (13) | 0.3045 (2) | 0.47037 (7) | 0.0182 (3) | |
| N3 | 0.37143 (13) | 0.3012 (2) | 0.39910 (7) | 0.0178 (3) | |
| C1 | 0.31849 (18) | 0.3310 (3) | 0.70652 (8) | 0.0235 (4) | |
| H1 | 0.2800 | 0.3496 | 0.7514 | 0.028* | |
| C2 | 0.44956 (17) | 0.2815 (3) | 0.69312 (8) | 0.0240 (4) | |
| H2 | 0.5173 | 0.2581 | 0.7270 | 0.029* | |
| C3 | 0.46594 (16) | 0.2715 (2) | 0.62056 (8) | 0.0198 (4) | |
| H3 | 0.5464 | 0.2417 | 0.5962 | 0.024* | |
| C4 | 0.34176 (15) | 0.3137 (2) | 0.59132 (8) | 0.0160 (3) | |
| C5 | 0.29335 (15) | 0.3204 (2) | 0.52027 (8) | 0.0158 (3) | |
| H1N | 0.169 (3) | 0.380 (4) | 0.6375 (12) | 0.049 (7)* | |
| H2N | 0.474 (2) | 0.250 (3) | 0.4794 (11) | 0.032 (6)* |
| O1 | 0.0140 (6) | 0.0339 (7) | 0.0177 (5) | −0.0002 (5) | −0.0004 (4) | 0.0003 (5) |
| O2 | 0.0181 (6) | 0.0398 (7) | 0.0188 (6) | 0.0049 (5) | −0.0022 (4) | 0.0071 (5) |
| O3 | 0.0198 (6) | 0.0381 (7) | 0.0187 (6) | 0.0050 (5) | 0.0027 (5) | −0.0052 (5) |
| N1 | 0.0164 (7) | 0.0276 (7) | 0.0180 (6) | 0.0021 (6) | 0.0007 (5) | 0.0002 (6) |
| N2 | 0.0132 (6) | 0.0281 (7) | 0.0133 (6) | 0.0016 (5) | −0.0022 (5) | 0.0011 (5) |
| N3 | 0.0153 (6) | 0.0241 (7) | 0.0141 (6) | −0.0022 (5) | 0.0004 (5) | 0.0013 (5) |
| C1 | 0.0273 (9) | 0.0286 (9) | 0.0145 (7) | −0.0002 (7) | 0.0011 (6) | 0.0000 (6) |
| C2 | 0.0223 (8) | 0.0315 (9) | 0.0183 (8) | −0.0013 (7) | −0.0053 (6) | 0.0015 (6) |
| C3 | 0.0146 (7) | 0.0257 (8) | 0.0191 (8) | −0.0008 (6) | −0.0001 (6) | 0.0010 (6) |
| C4 | 0.0147 (7) | 0.0176 (7) | 0.0158 (7) | −0.0013 (6) | 0.0003 (6) | −0.0001 (5) |
| C5 | 0.0148 (7) | 0.0164 (7) | 0.0163 (7) | −0.0011 (6) | −0.0002 (5) | −0.0002 (6) |
| O1—C5 | 1.2234 (19) | N2—H2N | 0.88 (2) |
| O2—N3 | 1.2167 (17) | C1—C2 | 1.372 (2) |
| O3—N3 | 1.2206 (17) | C1—H1 | 0.9500 |
| N1—C1 | 1.354 (2) | C2—C3 | 1.403 (2) |
| N1—C4 | 1.374 (2) | C2—H2 | 0.9500 |
| N1—H1N | 0.88 (3) | C3—C4 | 1.388 (2) |
| N2—N3 | 1.3886 (18) | C3—H3 | 0.9500 |
| N2—C5 | 1.404 (2) | C4—C5 | 1.447 (2) |
| C1—N1—C4 | 109.32 (14) | C1—C2—C3 | 107.93 (15) |
| C1—N1—H1N | 128.4 (16) | C1—C2—H2 | 126.0 |
| C4—N1—H1N | 122.3 (16) | C3—C2—H2 | 126.0 |
| N3—N2—C5 | 123.09 (13) | C4—C3—C2 | 106.72 (14) |
| N3—N2—H2N | 110.2 (14) | C4—C3—H3 | 126.6 |
| C5—N2—H2N | 123.1 (14) | C2—C3—H3 | 126.6 |
| O2—N3—O3 | 126.02 (14) | N1—C4—C3 | 107.68 (13) |
| O2—N3—N2 | 118.77 (13) | N1—C4—C5 | 119.04 (14) |
| O3—N3—N2 | 115.15 (13) | C3—C4—C5 | 133.25 (14) |
| N1—C1—C2 | 108.33 (14) | O1—C5—N2 | 123.14 (14) |
| N1—C1—H1 | 125.8 | O1—C5—C4 | 123.46 (14) |
| C2—C1—H1 | 125.8 | N2—C5—C4 | 113.39 (13) |
| C5—N2—N3—O2 | 29.0 (2) | C2—C3—C4—C5 | −177.88 (16) |
| C5—N2—N3—O3 | −153.66 (14) | N3—N2—C5—O1 | −2.7 (2) |
| C4—N1—C1—C2 | −0.71 (19) | N3—N2—C5—C4 | 177.98 (13) |
| N1—C1—C2—C3 | 0.9 (2) | N1—C4—C5—O1 | −5.8 (2) |
| C1—C2—C3—C4 | −0.67 (19) | C3—C4—C5—O1 | 172.13 (17) |
| C1—N1—C4—C3 | 0.28 (18) | N1—C4—C5—N2 | 173.46 (13) |
| C1—N1—C4—C5 | 178.72 (14) | C3—C4—C5—N2 | −8.6 (3) |
| C2—C3—C4—N1 | 0.24 (18) |
| H··· | ||||
| N1—H1N···O3i | 0.88 (3) | 2.21 (3) | 3.001 (2) | 150 (2) |
| N2—H2N···O1ii | 0.88 (2) | 2.11 (2) | 2.982 (2) | 171.5 (19) |
| C3—H3···O1ii | 0.95 | 2.39 | 3.269 (2) | 154 |
| C3—H3···O2ii | 0.95 | 2.48 | 3.245 (2) | 138 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.88 (3) | 2.21 (3) | 3.001 (2) | 150 (2) |
| N2—H2 | 0.88 (2) | 2.11 (2) | 2.982 (2) | 171.5 (19) |
| C3—H3⋯O1ii | 0.95 | 2.39 | 3.269 (2) | 154 |
| C3—H3⋯O2ii | 0.95 | 2.48 | 3.245 (2) | 138 |
Symmetry codes: (i) ; (ii) .