| Literature DB >> 21523114 |
Zhi-Peng Yu1, Wen-Qian Geng, Lin Kong, Hong-Ping Zhou.
Abstract
In the crystal structure of the title compound, C(10)H(9)N(2)O(2) (+)·Cl(-)·2H(2)O, the components are linked by O-H⋯O, N-H⋯O, O-H⋯Cl and N-H⋯Cl hydrogen bonds. In the cation, the imidazole ring is oriented at a dihedral angle of 13.67 (17)° with respect to the benzene ring. In the crystal, π-π stacking occurs between nearly parallel benzene rings, which are oriented at a dihedral angle of 3.4 (1)°, the centroid-centroid distance being 3.798 (3) Å.Entities:
Year: 2011 PMID: 21523114 PMCID: PMC3051584 DOI: 10.1107/S1600536811001838
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H9N2O2+·Cl−·2H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3445 reflections |
| θ = 2.3–21.7° | |
| µ = 0.32 mm−1 | |
| Block, yellow | |
| 0.30 × 0.20 × 0.20 mm |
| Bruker SMART CCD area-detector diffractometer | 2165 independent reflections |
| Radiation source: fine-focus sealed tube | 1515 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 14555 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2165 reflections | (Δ/σ)max < 0.001 |
| 175 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.99581 (9) | 0.35765 (4) | 0.14987 (4) | 0.0637 (3) | |
| O3 | 0.4071 (3) | 0.34344 (12) | 0.18640 (13) | 0.0661 (6) | |
| N1 | 0.6552 (3) | 0.13527 (10) | 0.12446 (10) | 0.0467 (5) | |
| C4 | 0.6689 (3) | 0.11991 (13) | 0.19963 (12) | 0.0423 (6) | |
| O4 | 0.6325 (4) | 0.41591 (12) | 0.09501 (10) | 0.0628 (6) | |
| O2 | 0.6026 (3) | 0.11860 (11) | 0.46109 (9) | 0.0678 (6) | |
| H7 | 0.6154 | 0.1068 | 0.5031 | 0.102* | |
| O1 | 0.7751 (3) | 0.01818 (11) | 0.44419 (10) | 0.0717 (6) | |
| C10 | 0.6934 (3) | 0.07130 (14) | 0.42051 (13) | 0.0484 (6) | |
| C6 | 0.7468 (3) | 0.03739 (12) | 0.29454 (12) | 0.0473 (6) | |
| H6 | 0.7936 | −0.0083 | 0.3105 | 0.057* | |
| C7 | 0.6859 (3) | 0.09017 (12) | 0.34359 (12) | 0.0436 (6) | |
| C5 | 0.7388 (3) | 0.05180 (13) | 0.22262 (12) | 0.0481 (6) | |
| H5 | 0.7798 | 0.0163 | 0.1899 | 0.058* | |
| C8 | 0.6198 (3) | 0.15821 (13) | 0.31931 (13) | 0.0483 (6) | |
| H8 | 0.5805 | 0.1941 | 0.3520 | 0.058* | |
| C9 | 0.6110 (3) | 0.17379 (12) | 0.24755 (13) | 0.0469 (6) | |
| H9 | 0.5667 | 0.2199 | 0.2316 | 0.056* | |
| N2 | 0.6424 (3) | 0.12032 (12) | 0.01107 (11) | 0.0572 (6) | |
| H2 | 0.6454 | 0.0992 | −0.0302 | 0.069* | |
| C3 | 0.6691 (3) | 0.08596 (14) | 0.07173 (13) | 0.0532 (7) | |
| H3 | 0.6941 | 0.0348 | 0.0771 | 0.064* | |
| C2 | 0.6095 (6) | 0.19392 (17) | 0.02329 (16) | 0.0848 (11) | |
| C1 | 0.6184 (6) | 0.20415 (17) | 0.09362 (16) | 0.0934 (12) | |
| H1 | 0.6026 | 0.2496 | 0.1176 | 0.112* | |
| H12 | 0.554 (5) | 0.402 (2) | 0.117 (2) | 0.079 (13)* | |
| H13 | 0.734 (5) | 0.3965 (18) | 0.1065 (16) | 0.076 (11)* | |
| H11 | 0.283 (6) | 0.341 (2) | 0.179 (2) | 0.118 (15)* | |
| H10 | 0.421 (6) | 0.359 (2) | 0.228 (2) | 0.112 (15)* | |
| H4 | 0.597 (5) | 0.230 (2) | −0.017 (2) | 0.112 (12)* |
| Cl1 | 0.0640 (5) | 0.0782 (5) | 0.0489 (5) | −0.0013 (3) | 0.0008 (3) | −0.0005 (3) |
| O3 | 0.0661 (15) | 0.0778 (14) | 0.0545 (14) | 0.0097 (11) | 0.0031 (11) | −0.0011 (11) |
| N1 | 0.0583 (12) | 0.0435 (11) | 0.0383 (11) | −0.0004 (9) | −0.0028 (9) | −0.0008 (9) |
| C4 | 0.0480 (13) | 0.0421 (12) | 0.0370 (13) | −0.0030 (10) | −0.0038 (10) | −0.0021 (10) |
| O4 | 0.0735 (15) | 0.0696 (13) | 0.0452 (12) | 0.0004 (13) | 0.0000 (12) | 0.0038 (9) |
| O2 | 0.0905 (15) | 0.0737 (12) | 0.0393 (10) | 0.0220 (11) | 0.0038 (10) | 0.0017 (10) |
| O1 | 0.0959 (15) | 0.0695 (12) | 0.0497 (11) | 0.0272 (12) | −0.0011 (10) | 0.0107 (9) |
| C10 | 0.0514 (14) | 0.0493 (13) | 0.0444 (14) | 0.0007 (12) | −0.0044 (12) | −0.0011 (12) |
| C6 | 0.0571 (14) | 0.0351 (11) | 0.0497 (14) | 0.0043 (11) | −0.0047 (12) | 0.0016 (11) |
| C7 | 0.0460 (13) | 0.0431 (13) | 0.0416 (13) | −0.0026 (10) | −0.0050 (10) | 0.0009 (10) |
| C5 | 0.0623 (15) | 0.0406 (13) | 0.0413 (13) | 0.0032 (11) | 0.0000 (12) | −0.0057 (11) |
| C8 | 0.0602 (16) | 0.0449 (13) | 0.0397 (14) | 0.0045 (11) | −0.0018 (11) | −0.0059 (10) |
| C9 | 0.0583 (15) | 0.0374 (11) | 0.0450 (14) | 0.0064 (11) | −0.0015 (11) | 0.0012 (11) |
| N2 | 0.0716 (15) | 0.0631 (14) | 0.0369 (12) | −0.0002 (11) | −0.0019 (10) | −0.0056 (10) |
| C3 | 0.0677 (17) | 0.0500 (14) | 0.0420 (14) | 0.0050 (12) | −0.0007 (12) | −0.0075 (12) |
| C2 | 0.152 (3) | 0.0592 (19) | 0.0428 (17) | 0.011 (2) | −0.0073 (19) | 0.0062 (14) |
| C1 | 0.186 (4) | 0.0480 (16) | 0.0467 (17) | 0.017 (2) | −0.010 (2) | 0.0026 (13) |
| O3—H11 | 0.94 (5) | C6—C7 | 1.387 (3) |
| O3—H10 | 0.83 (4) | C6—H6 | 0.9300 |
| N1—C3 | 1.323 (3) | C7—C8 | 1.379 (3) |
| N1—C1 | 1.377 (3) | C5—H5 | 0.9300 |
| N1—C4 | 1.439 (3) | C8—C9 | 1.375 (3) |
| C4—C9 | 1.379 (3) | C8—H8 | 0.9300 |
| C4—C5 | 1.382 (3) | C9—H9 | 0.9300 |
| O4—H12 | 0.76 (4) | N2—C3 | 1.305 (3) |
| O4—H13 | 0.86 (3) | N2—C2 | 1.346 (4) |
| O2—C10 | 1.317 (3) | N2—H2 | 0.8600 |
| O2—H7 | 0.8200 | C3—H3 | 0.9300 |
| O1—C10 | 1.204 (3) | C2—C1 | 1.333 (4) |
| C10—C7 | 1.481 (3) | C2—H4 | 0.99 (4) |
| C6—C5 | 1.373 (3) | C1—H1 | 0.9300 |
| H11—O3—H10 | 106 (4) | C4—C5—H5 | 120.5 |
| C3—N1—C1 | 106.6 (2) | C9—C8—C7 | 121.0 (2) |
| C3—N1—C4 | 127.0 (2) | C9—C8—H8 | 119.5 |
| C1—N1—C4 | 126.3 (2) | C7—C8—H8 | 119.5 |
| C9—C4—C5 | 121.2 (2) | C8—C9—C4 | 118.9 (2) |
| C9—C4—N1 | 119.0 (2) | C8—C9—H9 | 120.5 |
| C5—C4—N1 | 119.8 (2) | C4—C9—H9 | 120.5 |
| H12—O4—H13 | 115 (3) | C3—N2—C2 | 109.3 (2) |
| C10—O2—H7 | 109.5 | C3—N2—H2 | 125.3 |
| O1—C10—O2 | 122.8 (2) | C2—N2—H2 | 125.3 |
| O1—C10—C7 | 123.6 (2) | N2—C3—N1 | 109.4 (2) |
| O2—C10—C7 | 113.6 (2) | N2—C3—H3 | 125.3 |
| C5—C6—C7 | 120.8 (2) | N1—C3—H3 | 125.3 |
| C5—C6—H6 | 119.6 | C1—C2—N2 | 106.9 (3) |
| C7—C6—H6 | 119.6 | C1—C2—H4 | 132 (2) |
| C8—C7—C6 | 119.1 (2) | N2—C2—H4 | 121 (2) |
| C8—C7—C10 | 122.1 (2) | C2—C1—N1 | 107.8 (3) |
| C6—C7—C10 | 118.8 (2) | C2—C1—H1 | 126.1 |
| C6—C5—C4 | 119.0 (2) | N1—C1—H1 | 126.1 |
| C6—C5—H5 | 120.5 | ||
| C3—N1—C4—C9 | −165.3 (2) | C6—C7—C8—C9 | 1.0 (4) |
| C1—N1—C4—C9 | 12.2 (4) | C10—C7—C8—C9 | −178.7 (2) |
| C3—N1—C4—C5 | 14.4 (4) | C7—C8—C9—C4 | 0.3 (4) |
| C1—N1—C4—C5 | −168.1 (3) | C5—C4—C9—C8 | −1.5 (4) |
| C5—C6—C7—C8 | −1.1 (4) | N1—C4—C9—C8 | 178.3 (2) |
| C5—C6—C7—C10 | 178.6 (2) | C2—N2—C3—N1 | −0.2 (3) |
| O1—C10—C7—C8 | −167.9 (3) | C1—N1—C3—N2 | −0.3 (3) |
| O2—C10—C7—C8 | 11.7 (3) | C4—N1—C3—N2 | 177.6 (2) |
| O1—C10—C7—C6 | 12.4 (4) | C3—N2—C2—C1 | 0.6 (4) |
| O2—C10—C7—C6 | −168.0 (2) | N2—C2—C1—N1 | −0.7 (4) |
| C7—C6—C5—C4 | 0.0 (4) | C3—N1—C1—C2 | 0.6 (4) |
| C9—C4—C5—C6 | 1.4 (4) | C4—N1—C1—C2 | −177.3 (3) |
| N1—C4—C5—C6 | −178.4 (2) |
| H··· | ||||
| N2—H2···O1i | 0.86 | 2.21 | 2.822 (3) | 128 |
| N2—H2···Cl1ii | 0.86 | 2.62 | 3.231 (2) | 129 |
| O2—H7···O4iii | 0.82 | 1.77 | 2.594 (3) | 177 |
| O3—H10···Cl1iv | 0.83 (4) | 2.36 (4) | 3.150 (3) | 159 (3) |
| O3—H11···Cl1v | 0.94 (5) | 2.22 (5) | 3.141 (3) | 168 (3) |
| O4—H12···O3 | 0.76 (4) | 1.99 (4) | 2.718 (4) | 162 (4) |
| O4—H13···Cl1 | 0.86 (4) | 2.22 (4) | 3.066 (4) | 172 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O1i | 0.86 | 2.21 | 2.822 (3) | 128 |
| N2—H2⋯Cl1ii | 0.86 | 2.62 | 3.231 (2) | 129 |
| O2—H7⋯O4iii | 0.82 | 1.77 | 2.594 (3) | 177 |
| O3—H10⋯Cl1iv | 0.83 (4) | 2.36 (4) | 3.150 (3) | 159 (3) |
| O3—H11⋯Cl1v | 0.94 (5) | 2.22 (5) | 3.141 (3) | 168 (3) |
| O4—H12⋯O3 | 0.76 (4) | 1.99 (4) | 2.718 (4) | 162 (4) |
| O4—H13⋯Cl1 | 0.86 (4) | 2.22 (4) | 3.066 (4) | 172 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .