Literature DB >> 21522996

4-Bromo-3-hy-droxy-3-(4-hy-droxy-2-oxo-2H-chromen-3-yl)indolin-2-one.

Song-Lei Zhu1.   

Abstract

In the mol-ecule of the title compound, C(17)H(10)BrNO(5), the indoline system and the attached coumarin ring are each essentially planar with maximum deviations of 0.074 (2) and 0.062 (2) Å, respectively. The dihedral angle between them is 85.09 (3)°. In the crystal, all heteroatoms (except for the coumarin oxo O atoms) are involved in intra- and inter-molecular hydrogen bonds. An intra-molecular O-H⋯O hydrogen bond occurs. In the crystal, mol-ecules are linked through O-H⋯O, N-H⋯O and C-H⋯O contacts, forming a complex three-dimensional structure.

Entities:  

Year:  2011        PMID: 21522996      PMCID: PMC3051509          DOI: 10.1107/S1600536811000213

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to indoles and their biological activity, see: Da-Silva et al. (2001 ▶); Joshi & Chand (1982 ▶). Coumarin and its derivatives are important in the perfume, cosmetic and pharmaceutical industries, see: Soine (1964 ▶). For the synthesis of indole and coumarin derivatives in water, see: Zhu (2008 ▶).

Experimental

Crystal data

C17H10BrNO5 M = 388.17 Monoclinic, a = 11.358 (3) Å b = 13.428 (3) Å c = 10.360 (2) Å β = 113.307 (3)° V = 1451.1 (5) Å3 Z = 4 Mo Kα radiation μ = 2.86 mm−1 T = 153 K 0.78 × 0.36 × 0.35 mm

Data collection

Rigaku Mercury diffractometer Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.173, T max = 0.366 13755 measured reflections 2655 independent reflections 2544 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.059 S = 1.08 2655 reflections 220 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.42 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811000213/bh2329sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811000213/bh2329Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H10BrNO5F(000) = 776
Mr = 388.17Dx = 1.777 Mg m3
Monoclinic, P21/cMelting point = 469–471 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71070 Å
a = 11.358 (3) ÅCell parameters from 5845 reflections
b = 13.428 (3) Åθ = 3.0–25.3°
c = 10.360 (2) ŵ = 2.86 mm1
β = 113.307 (3)°T = 153 K
V = 1451.1 (5) Å3Block, colourless
Z = 40.78 × 0.36 × 0.35 mm
Rigaku Mercury diffractometer2655 independent reflections
Radiation source: fine-focus sealed tube2544 reflections with I > 2σ(I)
graphiteRint = 0.023
Detector resolution: 7.31 pixels mm-1θmax = 25.4°, θmin = 3.0°
ω scansh = −13→11
Absorption correction: multi-scan (REQAB; Jacobson, 1998)k = −16→16
Tmin = 0.173, Tmax = 0.366l = −12→12
13755 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.059H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0278P)2 + 1.0659P] where P = (Fo2 + 2Fc2)/3
2655 reflections(Δ/σ)max = 0.001
220 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.42 e Å3
0 constraints
xyzUiso*/Ueq
Br10.618858 (19)0.424530 (16)−0.05888 (2)0.02468 (8)
O10.81967 (12)0.24579 (9)0.19817 (13)0.0150 (3)
H10.86020.25440.14660.023*
O20.93364 (12)0.28564 (10)0.50987 (13)0.0165 (3)
O30.55747 (12)0.43528 (9)0.37776 (13)0.0147 (3)
O40.75296 (12)0.48622 (9)0.41805 (13)0.0170 (3)
O50.58573 (13)0.20063 (10)0.13673 (14)0.0195 (3)
H50.65720.19780.13060.029*
N11.01146 (14)0.40717 (11)0.40768 (16)0.0144 (3)
H1A1.08750.41580.47570.017*
C10.81079 (17)0.33888 (13)0.26299 (18)0.0122 (4)
C20.92400 (17)0.33989 (13)0.41181 (19)0.0130 (4)
C30.96558 (18)0.46179 (14)0.28075 (19)0.0149 (4)
C40.84479 (18)0.42644 (13)0.19296 (19)0.0131 (4)
C50.78170 (18)0.47149 (14)0.06449 (19)0.0169 (4)
C60.8382 (2)0.55024 (15)0.0235 (2)0.0223 (4)
H60.79430.5817−0.06480.027*
C70.9589 (2)0.58249 (15)0.1123 (2)0.0239 (5)
H70.99750.63590.08320.029*
C81.02526 (19)0.53885 (15)0.2429 (2)0.0196 (4)
H81.10810.56130.30340.023*
C90.68273 (17)0.34335 (13)0.27623 (18)0.0124 (4)
C100.66978 (17)0.42446 (13)0.35962 (19)0.0124 (4)
C110.45996 (17)0.36647 (14)0.32443 (18)0.0135 (4)
C120.46973 (17)0.28643 (14)0.24491 (18)0.0139 (4)
C130.58467 (17)0.27702 (14)0.21777 (18)0.0136 (4)
C140.37095 (18)0.21509 (15)0.20037 (19)0.0176 (4)
H140.37580.15970.14570.021*
C150.26732 (18)0.22596 (16)0.2364 (2)0.0203 (4)
H150.20140.17720.20840.024*
C160.25902 (18)0.30829 (16)0.3140 (2)0.0214 (4)
H160.18640.31560.33700.026*
C170.35425 (18)0.37954 (15)0.35806 (19)0.0178 (4)
H170.34760.43600.41000.021*
U11U22U33U12U13U23
Br10.02298 (13)0.02838 (13)0.01533 (12)−0.00237 (8)−0.00025 (9)0.00135 (8)
O10.0179 (7)0.0140 (7)0.0178 (7)−0.0007 (5)0.0120 (5)−0.0031 (5)
O20.0181 (7)0.0185 (7)0.0146 (6)0.0034 (5)0.0084 (5)0.0029 (5)
O30.0115 (6)0.0166 (7)0.0166 (7)−0.0005 (5)0.0061 (5)−0.0045 (5)
O40.0156 (7)0.0151 (7)0.0192 (7)−0.0024 (5)0.0058 (5)−0.0056 (5)
O50.0166 (7)0.0213 (7)0.0231 (7)−0.0047 (6)0.0106 (6)−0.0118 (6)
N10.0099 (7)0.0185 (8)0.0131 (8)−0.0012 (6)0.0028 (6)−0.0004 (6)
C10.0130 (9)0.0116 (9)0.0125 (9)−0.0004 (7)0.0057 (7)−0.0017 (7)
C20.0125 (9)0.0130 (9)0.0157 (9)0.0032 (7)0.0078 (7)−0.0013 (7)
C30.0159 (9)0.0154 (9)0.0153 (9)0.0010 (7)0.0082 (7)−0.0021 (8)
C40.0153 (9)0.0122 (9)0.0143 (9)−0.0005 (7)0.0085 (8)−0.0019 (7)
C50.0192 (10)0.0174 (10)0.0139 (9)0.0005 (8)0.0064 (8)−0.0024 (8)
C60.0326 (12)0.0192 (10)0.0158 (10)0.0000 (9)0.0101 (9)0.0038 (8)
C70.0338 (12)0.0179 (10)0.0256 (11)−0.0060 (9)0.0177 (10)0.0002 (8)
C80.0204 (10)0.0182 (10)0.0226 (10)−0.0061 (8)0.0113 (8)−0.0035 (8)
C90.0121 (9)0.0136 (9)0.0112 (9)0.0009 (7)0.0045 (7)−0.0002 (7)
C100.0114 (9)0.0141 (9)0.0110 (9)0.0008 (7)0.0038 (7)0.0018 (7)
C110.0111 (9)0.0177 (9)0.0089 (8)−0.0008 (7)0.0010 (7)0.0011 (7)
C120.0128 (9)0.0173 (9)0.0102 (8)0.0001 (7)0.0031 (7)0.0021 (7)
C130.0164 (9)0.0137 (9)0.0103 (8)0.0012 (7)0.0048 (7)−0.0003 (7)
C140.0176 (9)0.0185 (10)0.0155 (9)−0.0021 (8)0.0051 (8)−0.0023 (8)
C150.0129 (9)0.0272 (11)0.0191 (10)−0.0068 (8)0.0045 (8)−0.0005 (8)
C160.0138 (9)0.0339 (12)0.0181 (10)0.0004 (8)0.0080 (8)0.0008 (9)
C170.0153 (9)0.0238 (10)0.0143 (9)0.0033 (8)0.0056 (8)−0.0016 (8)
Br1—C51.8925 (19)C6—C71.384 (3)
O1—C11.441 (2)C6—H60.9500
O1—H10.8400C7—C81.392 (3)
O2—C21.219 (2)C7—H70.9500
O3—C101.369 (2)C8—H80.9500
O3—C111.379 (2)C9—C131.366 (3)
O4—C101.222 (2)C9—C101.434 (2)
O5—C131.329 (2)C11—C121.385 (3)
O5—H50.8400C11—C171.387 (3)
N1—C21.356 (2)C12—C141.407 (3)
N1—C31.413 (2)C12—C131.446 (3)
N1—H1A0.8800C14—C151.376 (3)
C1—C41.510 (2)C14—H140.9500
C1—C91.515 (2)C15—C161.392 (3)
C1—C21.569 (2)C15—H150.9500
C3—C81.376 (3)C16—C171.379 (3)
C3—C41.395 (3)C16—H160.9500
C4—C51.377 (3)C17—H170.9500
C5—C61.388 (3)
C1—O1—H1109.5C3—C8—C7117.08 (18)
C10—O3—C11121.22 (14)C3—C8—H8121.5
C13—O5—H5109.5C7—C8—H8121.5
C2—N1—C3111.72 (15)C13—C9—C10120.16 (16)
C2—N1—H1A124.1C13—C9—C1125.27 (16)
C3—N1—H1A124.1C10—C9—C1114.56 (15)
O1—C1—C4111.91 (14)O4—C10—O3116.09 (16)
O1—C1—C9108.86 (14)O4—C10—C9124.78 (17)
C4—C1—C9116.74 (15)O3—C10—C9119.13 (15)
O1—C1—C2106.50 (14)O3—C11—C12121.17 (16)
C4—C1—C2101.50 (14)O3—C11—C17116.90 (16)
C9—C1—C2110.71 (14)C12—C11—C17121.91 (17)
O2—C2—N1126.80 (17)C11—C12—C14118.83 (16)
O2—C2—C1125.59 (16)C11—C12—C13118.33 (16)
N1—C2—C1107.49 (15)C14—C12—C13122.75 (17)
C8—C3—C4122.56 (18)O5—C13—C9125.02 (16)
C8—C3—N1127.83 (17)O5—C13—C12115.15 (16)
C4—C3—N1109.61 (16)C9—C13—C12119.82 (16)
C5—C4—C3118.82 (17)C15—C14—C12119.70 (18)
C5—C4—C1132.24 (17)C15—C14—H14120.2
C3—C4—C1108.91 (16)C12—C14—H14120.2
C4—C5—C6120.25 (18)C14—C15—C16120.10 (18)
C4—C5—Br1120.15 (14)C14—C15—H15120.0
C6—C5—Br1119.59 (15)C16—C15—H15120.0
C7—C6—C5119.43 (19)C17—C16—C15121.25 (18)
C7—C6—H6120.3C17—C16—H16119.4
C5—C6—H6120.3C15—C16—H16119.4
C6—C7—C8121.85 (19)C16—C17—C11118.19 (18)
C6—C7—H7119.1C16—C17—H17120.9
C8—C7—H7119.1C11—C17—H17120.9
C3—N1—C2—O2−176.25 (17)C2—C1—C9—C13−125.59 (19)
C3—N1—C2—C17.53 (19)O1—C1—C9—C10170.24 (14)
O1—C1—C2—O2−67.8 (2)C4—C1—C9—C10−61.9 (2)
C4—C1—C2—O2175.02 (17)C2—C1—C9—C1053.5 (2)
C9—C1—C2—O250.4 (2)C11—O3—C10—O4−175.77 (15)
O1—C1—C2—N1108.53 (15)C11—O3—C10—C93.9 (2)
C4—C1—C2—N1−8.69 (17)C13—C9—C10—O4178.59 (17)
C9—C1—C2—N1−133.29 (15)C1—C9—C10—O4−0.5 (3)
C2—N1—C3—C8176.71 (18)C13—C9—C10—O3−1.0 (3)
C2—N1—C3—C4−3.0 (2)C1—C9—C10—O3179.82 (15)
C8—C3—C4—C5−1.2 (3)C10—O3—C11—C12−3.1 (2)
N1—C3—C4—C5178.55 (16)C10—O3—C11—C17174.87 (16)
C8—C3—C4—C1177.16 (17)O3—C11—C12—C14176.13 (16)
N1—C3—C4—C1−3.1 (2)C17—C11—C12—C14−1.7 (3)
O1—C1—C4—C571.8 (2)O3—C11—C12—C13−0.6 (3)
C9—C1—C4—C5−54.5 (3)C17—C11—C12—C13−178.41 (17)
C2—C1—C4—C5−174.98 (19)C10—C9—C13—O5178.61 (17)
O1—C1—C4—C3−106.26 (17)C1—C9—C13—O5−2.4 (3)
C9—C1—C4—C3127.40 (17)C10—C9—C13—C12−2.5 (3)
C2—C1—C4—C36.96 (18)C1—C9—C13—C12176.51 (16)
C3—C4—C5—C60.4 (3)C11—C12—C13—O5−177.70 (16)
C1—C4—C5—C6−177.55 (18)C14—C12—C13—O55.8 (3)
C3—C4—C5—Br1179.05 (13)C11—C12—C13—C93.3 (3)
C1—C4—C5—Br11.1 (3)C14—C12—C13—C9−173.22 (17)
C4—C5—C6—C70.6 (3)C11—C12—C14—C15−0.1 (3)
Br1—C5—C6—C7−178.13 (15)C13—C12—C14—C15176.45 (17)
C5—C6—C7—C8−0.7 (3)C12—C14—C15—C161.4 (3)
C4—C3—C8—C71.0 (3)C14—C15—C16—C17−1.0 (3)
N1—C3—C8—C7−178.66 (18)C15—C16—C17—C11−0.8 (3)
C6—C7—C8—C3−0.1 (3)O3—C11—C17—C16−175.81 (16)
O1—C1—C9—C13−8.8 (2)C12—C11—C17—C162.1 (3)
C4—C1—C9—C13119.0 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.841.982.7672 (17)155
O5—H5···O10.841.812.5486 (19)145
N1—H1A···O4ii0.882.162.940 (2)148
C7—H7···O2iii0.952.493.429 (2)172
C8—H8···O1iii0.952.613.217 (2)122
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.841.982.7672 (17)155
O5—H5⋯O10.841.812.5486 (19)145
N1—H1A⋯O4ii0.882.162.940 (2)148
C7—H7⋯O2iii0.952.493.429 (2)172
C8—H8⋯O1iii0.952.613.217 (2)122

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

Review 1.  NATURALLY OCCURRING COUMARINS AND RELATED PHYSIOLOGICAL ACTIVITIES.

Authors:  T O SOINE
Journal:  J Pharm Sci       Date:  1964-03       Impact factor: 3.534

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Biologically active indole derivatives.

Authors:  K C Joshi; P Chand
Journal:  Pharmazie       Date:  1982-01       Impact factor: 1.267

4.  2-Amino-4'-bromo-2',5-dioxo-4H,5H-pyrano[3,2-c]chromene-4-spiro-3'(2'H)-1'H-indole-3-carbonitrile N,N-dimethyl-formamide solvate.

Authors:  Song-Lei Zhu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-30

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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