| Literature DB >> 21522950 |
Ibrahim Abdul Razak, Suchada Chantrapromma, Abdul Wahab Salae, Hoong-Kun Fun.
Abstract
THE TITLE COMPOUND [SYSTEMATIC NAME: 14,15-dihy-droxy-7,7-dimethyl-13-(propan-2-yl)tricyclo-[9.4.0.0(3,8)]penta-deca-1(11),3(8),9,12,14-pentaen-4-one], C(20)H(24)O(3), is a new icetexane diterpenoid which was isolated from the roots of Premna obtusifolia (Verbenaceae). The mol-ecule has three fused rings: a cyclo-hexenone, a central cyclo-heptene and a benzene ring. The cyclo-hexenone ring is in an envelope conformation, whereas the cyclo-heptene ring is in a twisted boat conformation. Intra-molecular O-H⋯O hydrogen bonds generate S(5) and S(8) ring motifs. In the crystal, mol-ecules are linked into dimers through O-H⋯O hydrogen bonds. These dimers are arranged in to sheets parallel to the ac plane. C-H⋯O and weak C-H⋯π inter-actions are also present.Entities:
Year: 2011 PMID: 21522950 PMCID: PMC3051731 DOI: 10.1107/S1600536810053754
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H24O3 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 7404 reflections |
| θ = 2.3–35.0° | |
| µ = 0.08 mm−1 | |
| β = 108.683 (2)° | Needle, yellow |
| 0.60 × 0.32 × 0.28 mm | |
| Bruker APEXII CCD area-detector diffractometer | 7404 independent reflections |
| Radiation source: sealed tube | 6198 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 60861 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 7404 reflections | (Δ/σ)max = 0.001 |
| 304 parameters | Δρmax = 0.48 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.34135 (2) | 0.18997 (7) | 0.45441 (4) | 0.02727 (13) | |
| O2 | 0.22121 (2) | 0.14713 (6) | 0.42998 (3) | 0.02042 (11) | |
| H1O2 | 0.2573 (7) | 0.1602 (17) | 0.4448 (11) | 0.048 (4)* | |
| O3 | 0.11523 (2) | 0.24175 (6) | 0.35038 (3) | 0.01917 (10) | |
| H1O3 | 0.1377 (6) | 0.2421 (15) | 0.4088 (10) | 0.041 (4)* | |
| C1 | 0.35660 (3) | 0.18067 (8) | 0.38355 (5) | 0.02009 (13) | |
| C2 | 0.40308 (3) | 0.27126 (10) | 0.37203 (6) | 0.02604 (15) | |
| H2A | 0.4322 (6) | 0.2867 (15) | 0.4357 (10) | 0.038 (3)* | |
| H2B | 0.3867 (6) | 0.3655 (16) | 0.3534 (10) | 0.040 (3)* | |
| C3 | 0.42779 (3) | 0.20818 (9) | 0.30042 (6) | 0.02461 (14) | |
| H3A | 0.4475 (5) | 0.1170 (14) | 0.3235 (9) | 0.031 (3)* | |
| H3B | 0.4575 (6) | 0.2728 (14) | 0.2903 (9) | 0.035 (3)* | |
| C4 | 0.38338 (3) | 0.17810 (8) | 0.20403 (5) | 0.01959 (12) | |
| C5 | 0.33387 (3) | 0.09795 (7) | 0.21853 (5) | 0.01718 (11) | |
| C6 | 0.29158 (3) | 0.04077 (8) | 0.13478 (5) | 0.02060 (13) | |
| H6A | 0.3058 (5) | 0.0138 (14) | 0.0831 (9) | 0.030 (3)* | |
| C7 | 0.23475 (3) | 0.03856 (8) | 0.11708 (5) | 0.02164 (13) | |
| H7A | 0.2123 (5) | 0.0114 (13) | 0.0533 (8) | 0.027 (3)* | |
| C8 | 0.20317 (3) | 0.08458 (7) | 0.17837 (4) | 0.01703 (11) | |
| C9 | 0.22671 (3) | 0.07722 (7) | 0.27714 (4) | 0.01548 (11) | |
| C10 | 0.32690 (3) | 0.08736 (7) | 0.30526 (4) | 0.01682 (11) | |
| C11 | 0.19897 (3) | 0.14125 (7) | 0.33345 (4) | 0.01495 (11) | |
| C12 | 0.14429 (3) | 0.19365 (7) | 0.29375 (4) | 0.01505 (11) | |
| C13 | 0.11813 (3) | 0.19232 (7) | 0.19542 (4) | 0.01734 (11) | |
| C14 | 0.14864 (3) | 0.14018 (8) | 0.13931 (5) | 0.01940 (12) | |
| H14A | 0.1327 (5) | 0.1435 (13) | 0.0691 (8) | 0.029 (3)* | |
| C15 | 0.05752 (3) | 0.24151 (8) | 0.15458 (5) | 0.02181 (13) | |
| H15A | 0.0487 (6) | 0.3020 (16) | 0.2035 (10) | 0.043 (4)* | |
| C16 | 0.01786 (3) | 0.11352 (11) | 0.13660 (7) | 0.03109 (18) | |
| H16A | 0.0246 (6) | 0.0563 (16) | 0.0858 (10) | 0.041 (3)* | |
| H16B | −0.0208 (6) | 0.1452 (14) | 0.1209 (10) | 0.038 (3)* | |
| H16C | 0.0246 (6) | 0.0539 (16) | 0.1939 (10) | 0.043 (4)* | |
| C17 | 0.04657 (4) | 0.32889 (10) | 0.06447 (7) | 0.03084 (17) | |
| H17A | 0.0749 (7) | 0.4078 (17) | 0.0732 (11) | 0.051 (4)* | |
| H17B | 0.0075 (6) | 0.3743 (15) | 0.0475 (10) | 0.040 (3)* | |
| H17C | 0.0477 (6) | 0.2691 (16) | 0.0078 (10) | 0.043 (4)* | |
| C18 | 0.41211 (4) | 0.08869 (9) | 0.14665 (6) | 0.02682 (15) | |
| H18A | 0.3865 (6) | 0.0729 (15) | 0.0807 (10) | 0.036 (3)* | |
| H18B | 0.4239 (6) | −0.0029 (16) | 0.1787 (9) | 0.039 (3)* | |
| H18C | 0.4464 (5) | 0.1393 (14) | 0.1442 (9) | 0.034 (3)* | |
| C19 | 0.36195 (4) | 0.31667 (9) | 0.15095 (7) | 0.03147 (17) | |
| H19A | 0.3940 (6) | 0.3712 (17) | 0.1398 (11) | 0.048 (4)* | |
| H19B | 0.3440 (6) | 0.3764 (17) | 0.1896 (10) | 0.045 (4)* | |
| H19C | 0.3354 (6) | 0.2977 (15) | 0.0893 (10) | 0.037 (3)* | |
| C20 | 0.28082 (3) | −0.00267 (7) | 0.31829 (5) | 0.01867 (12) | |
| H20A | 0.2799 (5) | −0.0936 (12) | 0.2844 (8) | 0.022 (3)* | |
| H20B | 0.2880 (4) | −0.0209 (12) | 0.3870 (8) | 0.022 (2)* |
| O1 | 0.0226 (2) | 0.0428 (3) | 0.0156 (2) | 0.0040 (2) | 0.00490 (18) | −0.0048 (2) |
| O2 | 0.0181 (2) | 0.0313 (3) | 0.01191 (19) | 0.00406 (19) | 0.00491 (16) | 0.00394 (17) |
| O3 | 0.0166 (2) | 0.0264 (2) | 0.0148 (2) | 0.00275 (17) | 0.00536 (16) | −0.00128 (17) |
| C1 | 0.0154 (3) | 0.0273 (3) | 0.0159 (3) | 0.0042 (2) | 0.0026 (2) | −0.0018 (2) |
| C2 | 0.0178 (3) | 0.0336 (4) | 0.0254 (3) | −0.0039 (3) | 0.0051 (2) | −0.0100 (3) |
| C3 | 0.0174 (3) | 0.0287 (4) | 0.0284 (3) | −0.0002 (2) | 0.0082 (2) | −0.0037 (3) |
| C4 | 0.0206 (3) | 0.0185 (3) | 0.0220 (3) | 0.0002 (2) | 0.0100 (2) | −0.0002 (2) |
| C5 | 0.0178 (3) | 0.0177 (3) | 0.0167 (2) | 0.0012 (2) | 0.0065 (2) | −0.0009 (2) |
| C6 | 0.0210 (3) | 0.0246 (3) | 0.0174 (3) | 0.0002 (2) | 0.0078 (2) | −0.0051 (2) |
| C7 | 0.0210 (3) | 0.0267 (3) | 0.0172 (3) | 0.0002 (2) | 0.0061 (2) | −0.0069 (2) |
| C8 | 0.0169 (2) | 0.0185 (3) | 0.0154 (2) | −0.0007 (2) | 0.0048 (2) | −0.0037 (2) |
| C9 | 0.0155 (2) | 0.0155 (2) | 0.0158 (2) | 0.00006 (19) | 0.00547 (19) | 0.00067 (19) |
| C10 | 0.0154 (2) | 0.0197 (3) | 0.0151 (2) | 0.0027 (2) | 0.00442 (19) | 0.0006 (2) |
| C11 | 0.0157 (2) | 0.0166 (2) | 0.0127 (2) | 0.00038 (19) | 0.00469 (18) | 0.00190 (19) |
| C12 | 0.0152 (2) | 0.0160 (2) | 0.0140 (2) | −0.00001 (19) | 0.00473 (19) | −0.00030 (18) |
| C13 | 0.0156 (2) | 0.0200 (3) | 0.0147 (2) | 0.0005 (2) | 0.00235 (19) | −0.0028 (2) |
| C14 | 0.0182 (3) | 0.0241 (3) | 0.0143 (2) | −0.0001 (2) | 0.0030 (2) | −0.0046 (2) |
| C15 | 0.0183 (3) | 0.0285 (3) | 0.0157 (3) | 0.0051 (2) | 0.0013 (2) | −0.0036 (2) |
| C16 | 0.0164 (3) | 0.0421 (5) | 0.0334 (4) | −0.0012 (3) | 0.0060 (3) | 0.0097 (3) |
| C17 | 0.0259 (4) | 0.0298 (4) | 0.0305 (4) | 0.0017 (3) | 0.0002 (3) | 0.0083 (3) |
| C18 | 0.0278 (3) | 0.0259 (3) | 0.0338 (4) | −0.0016 (3) | 0.0198 (3) | −0.0033 (3) |
| C19 | 0.0345 (4) | 0.0222 (3) | 0.0384 (4) | 0.0030 (3) | 0.0126 (4) | 0.0088 (3) |
| C20 | 0.0184 (3) | 0.0186 (3) | 0.0201 (3) | 0.0032 (2) | 0.0077 (2) | 0.0038 (2) |
| O1—C1 | 1.2403 (9) | C9—C20 | 1.5022 (9) |
| O2—C11 | 1.3725 (8) | C10—C20 | 1.4976 (9) |
| O2—H1O2 | 0.869 (16) | C11—C12 | 1.3998 (9) |
| O3—C12 | 1.3610 (8) | C12—C13 | 1.4058 (9) |
| O3—H1O3 | 0.875 (14) | C13—C14 | 1.3948 (9) |
| C1—C10 | 1.4638 (10) | C13—C15 | 1.5196 (9) |
| C1—C2 | 1.5003 (11) | C14—H14A | 0.997 (12) |
| C2—C3 | 1.5208 (11) | C15—C17 | 1.5280 (12) |
| C2—H2A | 1.008 (14) | C15—C16 | 1.5329 (12) |
| C2—H2B | 0.982 (15) | C15—H15A | 1.006 (15) |
| C3—C4 | 1.5406 (11) | C16—H16A | 0.989 (14) |
| C3—H3A | 0.996 (13) | C16—H16B | 0.969 (14) |
| C3—H3B | 1.011 (13) | C16—H16C | 0.993 (15) |
| C4—C5 | 1.5286 (10) | C17—H17A | 1.008 (16) |
| C4—C19 | 1.5345 (11) | C17—H17B | 1.026 (14) |
| C4—C18 | 1.5379 (10) | C17—H17C | 1.026 (15) |
| C5—C10 | 1.3674 (9) | C18—H18A | 1.001 (13) |
| C5—C6 | 1.4615 (10) | C18—H18B | 0.987 (15) |
| C6—C7 | 1.3655 (10) | C18—H18C | 0.996 (13) |
| C6—H6A | 0.984 (12) | C19—H19A | 1.013 (15) |
| C7—C8 | 1.4574 (9) | C19—H19B | 1.011 (15) |
| C7—H7A | 0.975 (12) | C19—H19C | 0.966 (14) |
| C8—C9 | 1.4065 (9) | C20—H20A | 0.993 (11) |
| C8—C14 | 1.4068 (9) | C20—H20B | 1.000 (11) |
| C9—C11 | 1.3912 (9) | ||
| C11—O2—H1O2 | 108.3 (10) | O3—C12—C13 | 119.36 (6) |
| C12—O3—H1O3 | 108.7 (9) | C11—C12—C13 | 120.46 (6) |
| O1—C1—C10 | 120.59 (7) | C14—C13—C12 | 118.06 (6) |
| O1—C1—C2 | 121.49 (7) | C14—C13—C15 | 122.54 (6) |
| C10—C1—C2 | 117.78 (6) | C12—C13—C15 | 119.35 (6) |
| C1—C2—C3 | 111.47 (6) | C13—C14—C8 | 122.04 (6) |
| C1—C2—H2A | 109.2 (8) | C13—C14—H14A | 120.7 (7) |
| C3—C2—H2A | 112.7 (8) | C8—C14—H14A | 117.3 (7) |
| C1—C2—H2B | 106.1 (8) | C13—C15—C17 | 113.17 (6) |
| C3—C2—H2B | 112.5 (8) | C13—C15—C16 | 109.93 (6) |
| H2A—C2—H2B | 104.4 (11) | C17—C15—C16 | 110.29 (6) |
| C2—C3—C4 | 113.28 (6) | C13—C15—H15A | 107.8 (8) |
| C2—C3—H3A | 111.3 (7) | C17—C15—H15A | 108.4 (9) |
| C4—C3—H3A | 107.2 (7) | C16—C15—H15A | 107.0 (9) |
| C2—C3—H3B | 110.9 (7) | C15—C16—H16A | 107.6 (8) |
| C4—C3—H3B | 108.5 (7) | C15—C16—H16B | 110.0 (8) |
| H3A—C3—H3B | 105.3 (10) | H16A—C16—H16B | 112.7 (11) |
| C5—C4—C19 | 109.16 (6) | C15—C16—H16C | 111.9 (8) |
| C5—C4—C18 | 110.87 (6) | H16A—C16—H16C | 109.3 (12) |
| C19—C4—C18 | 109.12 (7) | H16B—C16—H16C | 105.3 (11) |
| C5—C4—C3 | 109.63 (6) | C15—C17—H17A | 111.3 (9) |
| C19—C4—C3 | 110.87 (7) | C15—C17—H17B | 109.3 (8) |
| C18—C4—C3 | 107.17 (6) | H17A—C17—H17B | 107.7 (12) |
| C10—C5—C6 | 120.53 (6) | C15—C17—H17C | 112.8 (8) |
| C10—C5—C4 | 121.86 (6) | H17A—C17—H17C | 108.0 (12) |
| C6—C5—C4 | 117.47 (6) | H17B—C17—H17C | 107.6 (11) |
| C7—C6—C5 | 126.80 (6) | C4—C18—H18A | 111.3 (8) |
| C7—C6—H6A | 117.7 (7) | C4—C18—H18B | 109.3 (8) |
| C5—C6—H6A | 114.9 (7) | H18A—C18—H18B | 110.3 (11) |
| C6—C7—C8 | 128.23 (6) | C4—C18—H18C | 108.9 (8) |
| C6—C7—H7A | 115.8 (7) | H18A—C18—H18C | 109.0 (10) |
| C8—C7—H7A | 115.7 (7) | H18B—C18—H18C | 108.0 (11) |
| C9—C8—C14 | 118.71 (6) | C4—C19—H19A | 110.6 (9) |
| C9—C8—C7 | 121.08 (6) | C4—C19—H19B | 109.0 (9) |
| C14—C8—C7 | 120.20 (6) | H19A—C19—H19B | 109.6 (12) |
| C11—C9—C8 | 119.44 (6) | C4—C19—H19C | 110.9 (8) |
| C11—C9—C20 | 122.14 (6) | H19A—C19—H19C | 106.1 (12) |
| C8—C9—C20 | 118.41 (6) | H19B—C19—H19C | 110.6 (12) |
| C5—C10—C1 | 121.89 (6) | C10—C20—C9 | 107.30 (5) |
| C5—C10—C20 | 120.26 (6) | C10—C20—H20A | 108.4 (6) |
| C1—C10—C20 | 116.97 (6) | C9—C20—H20A | 110.8 (6) |
| O2—C11—C9 | 122.74 (6) | C10—C20—H20B | 109.8 (6) |
| O2—C11—C12 | 116.45 (5) | C9—C20—H20B | 110.4 (6) |
| C9—C11—C12 | 120.63 (6) | H20A—C20—H20B | 110.1 (9) |
| O3—C12—C11 | 120.14 (5) | ||
| O1—C1—C2—C3 | 160.07 (7) | O1—C1—C10—C20 | −4.42 (10) |
| C10—C1—C2—C3 | −24.13 (10) | C2—C1—C10—C20 | 179.74 (6) |
| C1—C2—C3—C4 | 54.32 (9) | C8—C9—C11—O2 | −175.30 (6) |
| C2—C3—C4—C5 | −48.51 (9) | C20—C9—C11—O2 | 5.92 (10) |
| C2—C3—C4—C19 | 72.08 (9) | C8—C9—C11—C12 | 9.76 (9) |
| C2—C3—C4—C18 | −168.92 (7) | C20—C9—C11—C12 | −169.02 (6) |
| C19—C4—C5—C10 | −108.14 (8) | O2—C11—C12—O3 | −2.53 (9) |
| C18—C4—C5—C10 | 131.62 (7) | C9—C11—C12—O3 | 172.71 (6) |
| C3—C4—C5—C10 | 13.49 (9) | O2—C11—C12—C13 | 179.82 (6) |
| C19—C4—C5—C6 | 67.64 (8) | C9—C11—C12—C13 | −4.93 (10) |
| C18—C4—C5—C6 | −52.61 (8) | O3—C12—C13—C14 | −178.92 (6) |
| C3—C4—C5—C6 | −170.74 (6) | C11—C12—C13—C14 | −1.26 (10) |
| C10—C5—C6—C7 | 35.04 (12) | O3—C12—C13—C15 | −1.36 (10) |
| C4—C5—C6—C7 | −140.79 (8) | C11—C12—C13—C15 | 176.30 (6) |
| C5—C6—C7—C8 | −3.68 (14) | C12—C13—C14—C8 | 2.58 (11) |
| C6—C7—C8—C9 | −29.82 (12) | C15—C13—C14—C8 | −174.89 (7) |
| C6—C7—C8—C14 | 148.89 (8) | C9—C8—C14—C13 | 2.18 (10) |
| C14—C8—C9—C11 | −8.32 (10) | C7—C8—C14—C13 | −176.55 (7) |
| C7—C8—C9—C11 | 170.41 (6) | C14—C13—C15—C17 | −42.19 (10) |
| C14—C8—C9—C20 | 170.51 (6) | C12—C13—C15—C17 | 140.37 (7) |
| C7—C8—C9—C20 | −10.77 (9) | C14—C13—C15—C16 | 81.62 (9) |
| C6—C5—C10—C1 | −159.14 (6) | C12—C13—C15—C16 | −95.82 (8) |
| C4—C5—C10—C1 | 16.50 (10) | C5—C10—C20—C9 | −75.85 (8) |
| C6—C5—C10—C20 | 9.77 (10) | C1—C10—C20—C9 | 93.60 (7) |
| C4—C5—C10—C20 | −174.58 (6) | C11—C9—C20—C10 | −106.68 (7) |
| O1—C1—C10—C5 | 164.85 (7) | C8—C9—C20—C10 | 74.52 (7) |
| C2—C1—C10—C5 | −10.99 (10) |
| Cg1 is the centroid of C8–C9/C11–C14 ring. |
| H··· | ||||
| O2—H1O2···O1 | 0.870 (18) | 2.088 (18) | 2.9479 (8) | 169.8 (15) |
| O2—H1O2···O2i | 0.870 (18) | 2.541 (16) | 2.8818 (7) | 104.3 (12) |
| O3—H1O3···O2 | 0.875 (14) | 2.208 (16) | 2.6955 (7) | 114.9 (12) |
| O3—H1O3···O1i | 0.875 (14) | 2.046 (14) | 2.8448 (7) | 151.3 (14) |
| C7—H7A···O2ii | 0.974 (12) | 2.440 (12) | 3.2262 (9) | 137.5 (10) |
| C15—H15A···O3 | 1.007 (15) | 2.364 (15) | 2.8216 (8) | 106.6 (10) |
| C18—H18B···O3iii | 0.986 (15) | 2.585 (15) | 3.3467 (10) | 134.1 (11) |
| C19—H19B···Cg1ii | 1.011 (15) | 2.798 (16) | 3.7130 (10) | 150.8 (12) |
| C20—H20A···Cg1iv | 0.993 (11) | 2.847 (12) | 3.7506 (8) | 151.6 (9) |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of C8–C9/C11–C14 ring.
| H⋯ | ||||
|---|---|---|---|---|
| O2—H1 | 0.870 (18) | 2.088 (18) | 2.9479 (8) | 169.8 (15) |
| O2—H1 | 0.870 (18) | 2.541 (16) | 2.8818 (7) | 104.3 (12) |
| O3—H1 | 0.875 (14) | 2.208 (16) | 2.6955 (7) | 114.9 (12) |
| O3—H1 | 0.875 (14) | 2.046 (14) | 2.8448 (7) | 151.3 (14) |
| C7—H7 | 0.974 (12) | 2.440 (12) | 3.2262 (9) | 137.5 (10) |
| C15—H15 | 1.007 (15) | 2.364 (15) | 2.8216 (8) | 106.6 (10) |
| C18—H18 | 0.986 (15) | 2.585 (15) | 3.3467 (10) | 134.1 (11) |
| C19—H19 | 1.011 (15) | 2.798 (16) | 3.7130 (10) | 150.8 (12) |
| C20—H20 | 0.993 (11) | 2.847 (12) | 3.7506 (8) | 151.6 (9) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .