Literature DB >> 21522826

Hexa-μ(2)-chlorido-μ(4)-oxido-tetra-kis-[(3-methyl-5-phenyl-1H-pyrazole-κN)copper(II)].

Hongshan He1.   

Abstract

The title compound, [Cu(4)Cl(6)O(C(10)H(10)N(2))(4)], contains four Cu(II) atoms which are bridged by six chloride anions. The central O atom is located on a crystallographic fourfold roto-inversion axis. Each Cu(II) atom is coordinated by an N atom of a neutral monodentate 3-methyl-5-phenyl-pyrazole ligand, three Cl(-) anions, and one O(2-) anion. The geometry at each Cu(II) atom is distorted trigonal-bipyramidal, with the three Cl(-) ions in the equatorial plane and the N and O atoms in the axial positions.

Entities:  

Year:  2011        PMID: 21522826      PMCID: PMC3051691          DOI: 10.1107/S1600536810053663

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the formation of tris­pyrazolylborate anions, see: Tekeste & Vahrenkamp (2007 ▶); Jacobsen & Cohen (2004 ▶); Puerta & Cohen (2003 ▶); Parkin (2004 ▶). For the formation of dinuclear copper compounds, see: He & Sykes (2007 ▶). For the formation of tetranuclear compounds, see: Keij et al. (1991 ▶); Liu et al. (2003 ▶); Chiarella et al. (2009 ▶).

Experimental

Crystal data

[Cu4Cl6O(C10H10N2)4] M = 1115.66 Tetragonal, a = 14.5460 (6) Å c = 11.1686 (7) Å V = 2363.1 (3) Å3 Z = 2 Mo Kα radiation μ = 2.16 mm−1 T = 293 K 0.30 × 0.30 × 0.30 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.564, T max = 0.564 14047 measured reflections 2072 independent reflections 1184 reflections with I > 2σ(I) R int = 0.080

Refinement

R[F 2 > 2σ(F 2)] = 0.067 wR(F 2) = 0.194 S = 1.17 2072 reflections 136 parameters H-atom parameters constrained Δρmax = 0.72 e Å−3 Δρmin = −0.56 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶), WinGX (Farrugia, 1999 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810053663/is2649sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810053663/is2649Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu4Cl6O(C10H10N2)4]Dx = 1.568 Mg m3
Mr = 1115.66Mo Kα radiation, λ = 0.71073 Å
Tetragonal, P4/nCell parameters from 16570 reflections
Hall symbol: -P 4aθ = 2.3–25.0°
a = 14.5460 (6) ŵ = 2.16 mm1
c = 11.1686 (7) ÅT = 293 K
V = 2363.1 (3) Å3Block, brown
Z = 20.30 × 0.30 × 0.30 mm
F(000) = 1124
Bruker APEXII CCD area-detector diffractometer2072 independent reflections
Radiation source: fine-focus sealed tube1184 reflections with I > 2σ(I)
graphiteRint = 0.080
φ and ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −17→17
Tmin = 0.564, Tmax = 0.564k = −17→17
14047 measured reflectionsl = −13→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.067H-atom parameters constrained
wR(F2) = 0.194w = 1/[σ2(Fo2) + (0.0526P)2 + 14.3478P] where P = (Fo2 + 2Fc2)/3
S = 1.17(Δ/σ)max < 0.001
2072 reflectionsΔρmax = 0.72 e Å3
136 parametersΔρmin = −0.56 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0028 (8)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.72083 (7)0.14541 (7)0.90461 (11)0.0567 (5)
Cl20.57726 (15)0.14864 (15)1.0031 (3)0.0729 (8)
Cl10.75000.25000.7295 (3)0.0705 (10)
N20.6784 (5)0.0507 (5)0.6812 (8)0.070 (2)
H20.68900.10060.64240.084*
N10.6896 (5)0.0413 (5)0.8019 (8)0.063 (2)
O10.75000.25001.00000.052 (3)
C10.6666 (7)−0.0801 (7)0.9515 (11)0.079 (3)
H1A0.6904−0.03371.00420.119*
H1B0.7046−0.13400.95600.119*
H1C0.6050−0.09540.97490.119*
C20.6663 (6)−0.0449 (6)0.8269 (10)0.063 (3)
C30.6412 (7)−0.0918 (7)0.7231 (11)0.075 (3)
H30.6232−0.15300.71770.090*
C40.6481 (7)−0.0296 (7)0.6292 (11)0.072 (3)
C50.6268 (7)−0.0344 (7)0.5035 (11)0.075 (3)
C60.5923 (10)−0.1170 (9)0.4580 (14)0.120 (5)
H60.5854−0.16770.50790.143*
C70.5686 (12)−0.1228 (12)0.3385 (15)0.139 (6)
H70.5476−0.17860.30840.166*
C80.5748 (10)−0.0512 (12)0.2651 (15)0.122 (5)
H80.5571−0.05660.18540.146*
C90.6072 (10)0.0301 (11)0.3078 (14)0.120 (5)
H90.61160.08110.25790.144*
C100.6331 (9)0.0355 (9)0.4244 (13)0.104 (4)
H100.65680.09110.45160.125*
U11U22U33U12U13U23
Cu10.0436 (6)0.0403 (6)0.0863 (9)−0.0028 (4)−0.0010 (6)−0.0064 (5)
Cl20.0424 (12)0.0602 (14)0.116 (2)−0.0100 (10)0.0079 (13)−0.0219 (14)
Cl10.088 (2)0.0405 (17)0.082 (2)−0.0115 (16)0.0000.000
N20.074 (5)0.056 (5)0.081 (6)−0.014 (4)0.002 (5)−0.006 (4)
N10.051 (4)0.043 (4)0.096 (7)−0.004 (3)0.011 (4)0.000 (4)
O10.039 (3)0.039 (3)0.077 (8)0.0000.0000.000
C10.065 (6)0.058 (6)0.114 (10)−0.016 (5)0.001 (6)0.009 (6)
C20.046 (5)0.051 (5)0.092 (8)−0.001 (4)0.009 (5)0.008 (5)
C30.076 (7)0.047 (5)0.102 (9)−0.013 (5)0.000 (6)−0.012 (6)
C40.066 (6)0.054 (6)0.097 (9)−0.016 (5)0.009 (6)−0.012 (6)
C50.073 (7)0.074 (7)0.078 (8)−0.017 (5)0.013 (6)−0.017 (6)
C60.149 (13)0.090 (9)0.119 (12)−0.040 (9)0.014 (10)−0.039 (8)
C70.180 (16)0.130 (14)0.106 (13)−0.057 (12)0.008 (12)−0.049 (11)
C80.108 (11)0.142 (14)0.115 (12)−0.035 (10)0.011 (9)−0.029 (12)
C90.128 (12)0.127 (12)0.104 (11)−0.037 (10)−0.004 (9)0.003 (10)
C100.122 (11)0.096 (9)0.095 (10)−0.032 (8)−0.014 (8)0.004 (8)
Cu1—O11.9052 (10)C1—H1C0.9600
Cu1—N11.953 (8)C2—C31.394 (14)
Cu1—Cl22.361 (2)C3—C41.388 (14)
Cu1—Cl2i2.377 (2)C3—H30.9300
Cu1—Cl12.514 (3)C4—C51.439 (15)
Cl2—Cu1ii2.377 (2)C5—C101.350 (15)
Cl1—Cu1iii2.514 (3)C5—C61.397 (15)
N2—N11.365 (11)C6—C71.38 (2)
N2—C41.377 (11)C6—H60.9300
N2—H20.8600C7—C81.33 (2)
N1—C21.328 (10)C7—H70.9300
O1—Cu1iii1.9052 (10)C8—C91.359 (18)
O1—Cu1i1.9052 (10)C8—H80.9300
O1—Cu1ii1.9052 (10)C9—C101.358 (18)
C1—C21.482 (15)C9—H90.9300
C1—H1A0.9600C10—H100.9300
C1—H1B0.9600
O1—Cu1—N1177.9 (3)H1B—C1—H1C109.5
O1—Cu1—Cl285.45 (7)N1—C2—C3110.7 (10)
N1—Cu1—Cl294.8 (2)N1—C2—C1121.5 (10)
O1—Cu1—Cl2i84.98 (7)C3—C2—C1127.8 (9)
N1—Cu1—Cl2i96.7 (2)C4—C3—C2106.9 (8)
Cl2—Cu1—Cl2i120.86 (5)C4—C3—H3126.6
O1—Cu1—Cl185.08 (7)C2—C3—H3126.6
N1—Cu1—Cl193.0 (3)N2—C4—C3104.9 (9)
Cl2—Cu1—Cl1119.98 (8)N2—C4—C5121.4 (10)
Cl2i—Cu1—Cl1117.06 (8)C3—C4—C5133.6 (9)
Cu1—Cl2—Cu1ii81.32 (8)C10—C5—C6115.7 (12)
Cu1iii—Cl1—Cu177.85 (12)C10—C5—C4126.0 (10)
N1—N2—C4111.7 (8)C6—C5—C4118.3 (12)
N1—N2—H2124.1C7—C6—C5119.6 (15)
C4—N2—H2124.1C7—C6—H6120.2
C2—N1—N2105.8 (8)C5—C6—H6120.2
C2—N1—Cu1131.9 (8)C8—C7—C6122.0 (15)
N2—N1—Cu1122.0 (6)C8—C7—H7119.0
Cu1iii—O1—Cu1112.00 (7)C6—C7—H7119.0
Cu1iii—O1—Cu1i108.22 (3)C7—C8—C9119.3 (16)
Cu1—O1—Cu1i108.22 (3)C7—C8—H8120.3
Cu1iii—O1—Cu1ii108.22 (3)C9—C8—H8120.3
Cu1—O1—Cu1ii108.22 (3)C10—C9—C8118.9 (15)
Cu1i—O1—Cu1ii112.00 (7)C10—C9—H9120.6
C2—C1—H1A109.5C8—C9—H9120.6
C2—C1—H1B109.5C5—C10—C9124.4 (13)
H1A—C1—H1B109.5C5—C10—H10117.8
C2—C1—H1C109.5C9—C10—H10117.8
H1A—C1—H1C109.5
O1—Cu1—Cl2—Cu1ii1.12 (6)Cl1—Cu1—O1—Cu1ii119.21 (2)
N1—Cu1—Cl2—Cu1ii−176.7 (3)N2—N1—C2—C30.8 (10)
Cl2i—Cu1—Cl2—Cu1ii82.50 (10)Cu1—N1—C2—C3174.0 (6)
Cl1—Cu1—Cl2—Cu1ii−80.53 (11)N2—N1—C2—C1−177.8 (8)
O1—Cu1—Cl1—Cu1iii0.0Cu1—N1—C2—C1−4.6 (13)
N1—Cu1—Cl1—Cu1iii179.1 (2)N1—C2—C3—C4−1.1 (11)
Cl2—Cu1—Cl1—Cu1iii81.86 (9)C1—C2—C3—C4177.3 (9)
Cl2i—Cu1—Cl1—Cu1iii−81.80 (9)N1—N2—C4—C3−0.6 (11)
C4—N2—N1—C2−0.1 (10)N1—N2—C4—C5176.7 (9)
C4—N2—N1—Cu1−174.1 (6)C2—C3—C4—N21.0 (11)
Cl2—Cu1—N1—C2−60.9 (8)C2—C3—C4—C5−175.8 (11)
Cl2i—Cu1—N1—C261.0 (8)N2—C4—C5—C10−0.3 (18)
Cl1—Cu1—N1—C2178.7 (8)C3—C4—C5—C10176.0 (13)
Cl2—Cu1—N1—N2111.4 (6)N2—C4—C5—C6−177.1 (11)
Cl2i—Cu1—N1—N2−126.7 (6)C3—C4—C5—C6−0.7 (19)
Cl1—Cu1—N1—N2−9.0 (6)C10—C5—C6—C71(2)
Cl2—Cu1—O1—Cu1iii−120.66 (8)C4—C5—C6—C7178.0 (13)
Cl2i—Cu1—O1—Cu1iii117.77 (8)C5—C6—C7—C8−2(3)
Cl1—Cu1—O1—Cu1iii0.0C6—C7—C8—C91(3)
Cl2—Cu1—O1—Cu1i120.13 (9)C7—C8—C9—C101(2)
Cl2i—Cu1—O1—Cu1i−1.44 (8)C6—C5—C10—C91(2)
Cl1—Cu1—O1—Cu1i−119.21 (2)C4—C5—C10—C9−175.8 (13)
Cl2—Cu1—O1—Cu1ii−1.45 (8)C8—C9—C10—C5−2(2)
Cl2i—Cu1—O1—Cu1ii−123.01 (9)
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Review 3.  Synthetic analogues relevant to the structure and function of zinc enzymes.

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4.  A short history of SHELX.

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5.  Hexa-mu-chloro-mu4-oxo-tetrakis[[5-(2,4,6-trimethylphenyl)pyrazole-kappaN2]copper(II)].

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6.  The neutral cluster amminehexa-mu(2)-chlorido-mu(4)-oxido-tris(1,4,6-triazabicyclo[3.3.0]oct-4-ene)tetracopper(II).

Authors:  Gina M Chiarella; Doris Y Melgarejo; John P Fackler
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