| Literature DB >> 21522743 |
Abstract
The title compound, C(4)H(12)N(2) (2+)·2C(8)Entities:
Year: 2010 PMID: 21522743 PMCID: PMC3050275 DOI: 10.1107/S1600536810049822
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H12N22+·2C8H9N2O4−·H2O | |
| Monoclinic, | Mo |
| Cell parameters from 1047 reflections | |
| θ = 0.0–0.0° | |
| µ = 0.10 mm−1 | |
| β = 101.296 (12)° | |
| Block, colorless | |
| 0.20 × 0.18 × 0.16 mm |
| Bruker SMART CCD area-detector diffractometer | 2066 independent reflections |
| Radiation source: fine-focus sealed tube | 1499 reflections with |
| graphite | |
| φ and ω scans | θmax = 24.3°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 6239 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2066 reflections | (Δ/σ)max = 0.001 |
| 165 parameters | Δρmax = 0.43 e Å−3 |
| 13 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.0849 (2) | 0.71261 (16) | 0.09103 (17) | 0.0422 (6) | |
| C2 | 0.1935 (2) | 0.67934 (14) | 0.15314 (16) | 0.0364 (6) | |
| C3 | 0.2144 (2) | 0.64165 (14) | 0.24013 (16) | 0.0363 (6) | |
| C4 | 0.1292 (2) | 0.62027 (16) | 0.30292 (18) | 0.0424 (6) | |
| C5 | 0.5184 (2) | 0.6485 (2) | 0.1969 (2) | 0.0611 (8) | |
| H5A | 0.5649 | 0.6478 | 0.2609 | 0.073* | |
| H5B | 0.5409 | 0.6984 | 0.1661 | 0.073* | |
| C6 | 0.5505 (3) | 0.5713 (3) | 0.1446 (4) | 0.1233 (18) | |
| H6A | 0.5028 | 0.5710 | 0.0810 | 0.148* | |
| H6B | 0.5308 | 0.5212 | 0.1765 | 0.148* | |
| C7 | 0.6847 (4) | 0.5704 (3) | 0.1403 (5) | 0.171 (3) | |
| H7A | 0.7039 | 0.6195 | 0.1078 | 0.205* | |
| H7B | 0.7024 | 0.5213 | 0.1072 | 0.205* | |
| H7C | 0.7320 | 0.5699 | 0.2032 | 0.205* | |
| C8 | 0.5499 (2) | 0.57768 (16) | 0.47554 (19) | 0.0483 (7) | |
| H8A | 0.5643 | 0.6370 | 0.4872 | 0.058* | |
| H8B | 0.5864 | 0.5617 | 0.4227 | 0.058* | |
| C9 | 0.3930 (2) | 0.47110 (16) | 0.43879 (17) | 0.0456 (7) | |
| H9A | 0.4231 | 0.4509 | 0.3845 | 0.055* | |
| H9B | 0.3062 | 0.4627 | 0.4267 | 0.055* | |
| C12 | 0.3877 (2) | 0.65313 (16) | 0.20022 (17) | 0.0429 (6) | |
| H2 | −0.004 (2) | 0.6647 (18) | 0.195 (2) | 0.103 (11)* | |
| H1W | 0.8140 | 0.7443 | 0.0209 | 0.31 (5)* | |
| N1 | 0.30493 (17) | 0.68560 (13) | 0.12993 (13) | 0.0410 (5) | |
| H1 | 0.3196 | 0.7069 | 0.0787 | 0.049* | |
| N2 | 0.33568 (18) | 0.62552 (13) | 0.26903 (14) | 0.0426 (5) | |
| N3 | 0.42026 (17) | 0.56200 (13) | 0.45216 (14) | 0.0426 (5) | |
| H3A | 0.3883 | 0.5897 | 0.3989 | 0.051* | |
| H3B | 0.3856 | 0.5818 | 0.4988 | 0.051* | |
| O1 | −0.01641 (15) | 0.70340 (13) | 0.11795 (13) | 0.0582 (6) | |
| O2 | 0.09473 (15) | 0.74761 (12) | 0.01667 (12) | 0.0510 (5) | |
| O3 | 0.01637 (15) | 0.63600 (13) | 0.27299 (13) | 0.0566 (5) | |
| O4 | 0.16861 (16) | 0.58907 (12) | 0.38055 (12) | 0.0537 (5) | |
| O5 | 0.7500 | 0.7747 (3) | 0.0000 | 0.170 (3) |
| C1 | 0.0499 (16) | 0.0430 (15) | 0.0338 (14) | 0.0040 (12) | 0.0083 (12) | −0.0025 (12) |
| C2 | 0.0403 (13) | 0.0379 (14) | 0.0322 (13) | 0.0010 (10) | 0.0101 (10) | −0.0008 (10) |
| C3 | 0.0388 (13) | 0.0379 (14) | 0.0331 (13) | 0.0015 (10) | 0.0092 (10) | 0.0022 (10) |
| C4 | 0.0480 (15) | 0.0419 (15) | 0.0390 (15) | 0.0021 (11) | 0.0124 (12) | 0.0047 (12) |
| C5 | 0.0471 (17) | 0.088 (2) | 0.0514 (17) | 0.0117 (15) | 0.0188 (14) | 0.0195 (16) |
| C6 | 0.090 (3) | 0.089 (3) | 0.215 (5) | 0.042 (2) | 0.089 (3) | 0.042 (3) |
| C7 | 0.130 (4) | 0.149 (5) | 0.268 (7) | 0.062 (4) | 0.126 (5) | 0.072 (5) |
| C8 | 0.0438 (15) | 0.0455 (16) | 0.0572 (17) | 0.0039 (12) | 0.0138 (13) | 0.0078 (13) |
| C9 | 0.0408 (14) | 0.0511 (17) | 0.0438 (16) | 0.0050 (12) | 0.0055 (11) | −0.0065 (12) |
| C12 | 0.0437 (14) | 0.0530 (16) | 0.0335 (14) | 0.0049 (12) | 0.0110 (11) | 0.0054 (12) |
| N1 | 0.0469 (12) | 0.0483 (13) | 0.0307 (11) | 0.0027 (10) | 0.0150 (9) | 0.0058 (9) |
| N2 | 0.0437 (12) | 0.0494 (13) | 0.0366 (12) | 0.0059 (9) | 0.0127 (9) | 0.0089 (9) |
| N3 | 0.0448 (12) | 0.0479 (13) | 0.0354 (11) | 0.0108 (9) | 0.0090 (9) | 0.0058 (9) |
| O1 | 0.0429 (11) | 0.0824 (15) | 0.0487 (12) | 0.0088 (9) | 0.0075 (9) | 0.0143 (10) |
| O2 | 0.0610 (12) | 0.0601 (12) | 0.0334 (10) | 0.0150 (9) | 0.0132 (9) | 0.0053 (8) |
| O3 | 0.0427 (11) | 0.0766 (14) | 0.0527 (12) | 0.0031 (9) | 0.0146 (9) | 0.0180 (10) |
| O4 | 0.0540 (11) | 0.0682 (13) | 0.0426 (11) | 0.0087 (9) | 0.0189 (9) | 0.0200 (9) |
| O5 | 0.084 (3) | 0.089 (3) | 0.315 (8) | 0.000 | −0.015 (4) | 0.000 |
| C1—O2 | 1.235 (3) | C7—H7C | 0.9600 |
| C1—O1 | 1.286 (3) | C8—N3 | 1.458 (3) |
| C1—C2 | 1.469 (3) | C8—C9i | 1.497 (3) |
| C2—N1 | 1.368 (3) | C8—H8A | 0.9700 |
| C2—C3 | 1.372 (3) | C8—H8B | 0.9700 |
| C3—N2 | 1.375 (3) | C9—N3 | 1.488 (3) |
| C3—C4 | 1.486 (3) | C9—C8i | 1.497 (3) |
| C4—O4 | 1.228 (3) | C9—H9A | 0.9700 |
| C4—O3 | 1.287 (3) | C9—H9B | 0.9700 |
| C5—C12 | 1.487 (3) | C12—N2 | 1.325 (3) |
| C5—C6 | 1.526 (5) | C12—N1 | 1.342 (3) |
| C5—H5A | 0.9700 | N1—H1 | 0.8600 |
| C5—H5B | 0.9700 | N3—H3A | 0.9000 |
| C6—C7 | 1.528 (5) | N3—H3B | 0.9000 |
| C6—H6A | 0.9700 | O1—H2 | 1.26 (3) |
| C6—H6B | 0.9700 | O3—H2 | 1.19 (3) |
| C7—H7A | 0.9600 | O5—H1W | 0.8739 |
| C7—H7B | 0.9600 | ||
| O2—C1—O1 | 123.5 (2) | H7B—C7—H7C | 109.5 |
| O2—C1—C2 | 119.2 (2) | N3—C8—C9i | 110.6 (2) |
| O1—C1—C2 | 117.3 (2) | N3—C8—H8A | 109.5 |
| N1—C2—C3 | 104.8 (2) | C9i—C8—H8A | 109.5 |
| N1—C2—C1 | 121.4 (2) | N3—C8—H8B | 109.5 |
| C3—C2—C1 | 133.8 (2) | C9i—C8—H8B | 109.5 |
| C2—C3—N2 | 110.1 (2) | H8A—C8—H8B | 108.1 |
| C2—C3—C4 | 130.1 (2) | N3—C9—C8i | 110.8 (2) |
| N2—C3—C4 | 119.8 (2) | N3—C9—H9A | 109.5 |
| O4—C4—O3 | 122.9 (2) | C8i—C9—H9A | 109.5 |
| O4—C4—C3 | 119.3 (2) | N3—C9—H9B | 109.5 |
| O3—C4—C3 | 117.8 (2) | C8i—C9—H9B | 109.5 |
| C12—C5—C6 | 112.9 (3) | H9A—C9—H9B | 108.1 |
| C12—C5—H5A | 109.0 | N2—C12—N1 | 110.5 (2) |
| C6—C5—H5A | 109.0 | N2—C12—C5 | 126.6 (2) |
| C12—C5—H5B | 109.0 | N1—C12—C5 | 122.9 (2) |
| C6—C5—H5B | 109.0 | C12—N1—C2 | 108.89 (19) |
| H5A—C5—H5B | 107.8 | C12—N1—H1 | 125.6 |
| C5—C6—C7 | 111.2 (4) | C2—N1—H1 | 125.6 |
| C5—C6—H6A | 109.4 | C12—N2—C3 | 105.7 (2) |
| C7—C6—H6A | 109.4 | C8—N3—C9 | 111.74 (18) |
| C5—C6—H6B | 109.4 | C8—N3—H3A | 109.3 |
| C7—C6—H6B | 109.4 | C9—N3—H3A | 109.3 |
| H6A—C6—H6B | 108.0 | C8—N3—H3B | 109.3 |
| C6—C7—H7A | 109.5 | C9—N3—H3B | 109.3 |
| C6—C7—H7B | 109.5 | H3A—N3—H3B | 107.9 |
| H7A—C7—H7B | 109.5 | C1—O1—H2 | 112.1 (11) |
| C6—C7—H7C | 109.5 | C4—O3—H2 | 112.9 (12) |
| H7A—C7—H7C | 109.5 |
| H··· | ||||
| O3—H2···O1 | 1.19 (3) | 1.26 (3) | 2.447 (3) | 172 (3) |
| O5—H1W···O1ii | 0.87 | 2.24 | 3.065 (3) | 158. |
| N1—H1···O2iii | 0.86 | 1.94 | 2.773 (3) | 162. |
| N3—H3A···N2 | 0.90 | 1.94 | 2.820 (3) | 165. |
| N3—H3B···O4iv | 0.90 | 1.96 | 2.826 (3) | 161. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H2⋯O1 | 1.19 (3) | 1.26 (3) | 2.447 (3) | 172 (3) |
| O5—H1 | 0.87 | 2.24 | 3.065 (3) | 158 |
| N1—H1⋯O2ii | 0.86 | 1.94 | 2.773 (3) | 162 |
| N3—H3 | 0.90 | 1.94 | 2.820 (3) | 165 |
| N3—H3 | 0.90 | 1.96 | 2.826 (3) | 161 |
Symmetry codes: (i) ; (ii) ; (iii) .