Literature DB >> 21522701

2,4-Dichloro-benzaldehyde 4-methyl-thio-semicarbazone.

Rongchun Li1.   

Abstract

The mol-ecule of the title compound, C(9)H(9)Cl(2)N(3)S, has an E configuration about the C=N bond. In the crystal, mol-ecules are linked through inter-molecular N-H⋯S hydrogen bonds, forming zigzag chains along the a axis.

Entities:  

Year:  2010        PMID: 21522701      PMCID: PMC3050402          DOI: 10.1107/S1600536810049743

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases derived from thio­semicarbazone and its derivatives, see: Casas et al. (2001 ▶); Beraldo et al. (2001 ▶); Jouad et al. (2002 ▶); Swearingen et al. (2002 ▶). For a similar structure reported recently by the author, see: Li (2010 ▶). For bond-length data, see: Allen et al. (1987 ▶). For similar structures, see: Selvanayagam et al. (2002 ▶); Karakurt et al. (2003 ▶); Bernhardt et al. (2003 ▶); Sampath et al. (2003 ▶).

Experimental

Crystal data

C9H9Cl2N3S M = 262.15 Monoclinic, a = 13.444 (3) Å b = 9.3299 (19) Å c = 18.499 (4) Å β = 92.160 (2)° V = 2318.7 (8) Å3 Z = 8 Mo Kα radiation μ = 0.71 mm−1 T = 298 K 0.18 × 0.17 × 0.13 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.883, T max = 0.913 7167 measured reflections 2518 independent reflections 1956 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.092 S = 1.05 2518 reflections 143 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.23 e Å−3 Δρmin = −0.35 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810049743/hg2763sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049743/hg2763Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H9Cl2N3SF(000) = 1072
Mr = 262.15Dx = 1.502 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2253 reflections
a = 13.444 (3) Åθ = 2.6–27.3°
b = 9.3299 (19) ŵ = 0.71 mm1
c = 18.499 (4) ÅT = 298 K
β = 92.160 (2)°Block, colourless
V = 2318.7 (8) Å30.18 × 0.17 × 0.13 mm
Z = 8
Bruker APEXII CCD area-detector diffractometer2518 independent reflections
Radiation source: fine-focus sealed tube1956 reflections with I > 2σ(I)
graphiteRint = 0.029
ω scansθmax = 27.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −16→17
Tmin = 0.883, Tmax = 0.913k = −11→11
7167 measured reflectionsl = −12→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0407P)2 + 0.9729P] where P = (Fo2 + 2Fc2)/3
2518 reflections(Δ/σ)max < 0.001
143 parametersΔρmax = 0.23 e Å3
2 restraintsΔρmin = −0.35 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.06826 (4)0.82058 (6)1.03663 (3)0.05201 (18)
Cl20.14697 (5)0.37973 (7)1.13869 (4)0.0674 (2)
N10.13058 (12)0.83265 (18)0.85768 (9)0.0383 (4)
N20.10483 (12)0.93140 (19)0.80525 (9)0.0410 (4)
N30.24558 (13)0.8704 (2)0.74802 (10)0.0433 (4)
S10.12967 (4)1.06871 (6)0.68333 (3)0.04588 (17)
C10.09166 (13)0.7175 (2)0.96685 (10)0.0317 (4)
C20.03225 (14)0.7064 (2)1.02693 (10)0.0344 (4)
C30.04938 (16)0.6053 (2)1.08024 (11)0.0409 (5)
H3A0.00890.60041.11980.049*
C40.12731 (16)0.5122 (2)1.07367 (11)0.0422 (5)
C50.18905 (16)0.5198 (2)1.01613 (12)0.0452 (5)
H50.24210.45661.01270.054*
C60.17114 (14)0.6221 (2)0.96390 (11)0.0396 (5)
H60.21340.62800.92530.047*
C70.07061 (14)0.8209 (2)0.90939 (10)0.0349 (4)
H70.01390.87790.91030.042*
C80.16428 (14)0.9497 (2)0.74839 (11)0.0360 (5)
C90.32200 (18)0.8847 (3)0.69507 (14)0.0600 (7)
H9A0.29270.87220.64730.090*
H9B0.37230.81310.70390.090*
H9C0.35150.97820.69900.090*
H20.0484 (12)0.982 (2)0.8085 (14)0.080*
H30.258 (2)0.810 (2)0.7848 (10)0.080*
U11U22U33U12U13U23
Cl10.0503 (3)0.0534 (3)0.0537 (4)0.0147 (3)0.0206 (3)0.0003 (3)
Cl20.0850 (5)0.0555 (4)0.0599 (4)−0.0016 (3)−0.0195 (3)0.0188 (3)
N10.0368 (9)0.0442 (9)0.0341 (9)0.0010 (7)0.0054 (7)0.0026 (8)
N20.0372 (10)0.0511 (10)0.0355 (10)0.0040 (8)0.0097 (8)0.0096 (8)
N30.0419 (10)0.0483 (10)0.0407 (11)0.0016 (8)0.0141 (8)0.0049 (8)
S10.0463 (3)0.0495 (3)0.0421 (3)−0.0076 (3)0.0037 (2)0.0102 (2)
C10.0299 (10)0.0328 (10)0.0325 (10)−0.0020 (8)0.0020 (8)−0.0036 (8)
C20.0329 (10)0.0361 (10)0.0346 (11)0.0016 (8)0.0043 (8)−0.0048 (8)
C30.0474 (12)0.0436 (12)0.0319 (11)−0.0050 (10)0.0047 (9)−0.0011 (9)
C40.0453 (13)0.0393 (11)0.0412 (12)−0.0031 (10)−0.0107 (10)0.0048 (9)
C50.0357 (12)0.0435 (12)0.0560 (14)0.0076 (9)−0.0039 (10)−0.0027 (11)
C60.0335 (11)0.0433 (11)0.0422 (12)0.0017 (9)0.0051 (9)−0.0029 (9)
C70.0325 (11)0.0382 (10)0.0343 (11)0.0002 (8)0.0067 (8)−0.0038 (9)
C80.0357 (11)0.0378 (11)0.0348 (11)−0.0091 (9)0.0032 (8)−0.0022 (8)
C90.0550 (15)0.0684 (16)0.0587 (16)0.0019 (13)0.0281 (12)0.0064 (13)
Cl1—C21.735 (2)C1—C71.455 (3)
Cl2—C41.738 (2)C2—C31.378 (3)
N1—C71.279 (2)C3—C41.370 (3)
N1—N21.373 (2)C3—H3A0.9300
N2—C81.356 (2)C4—C51.376 (3)
N2—H20.898 (10)C5—C61.373 (3)
N3—C81.320 (3)C5—H50.9300
N3—C91.452 (3)C6—H60.9300
N3—H30.893 (10)C7—H70.9300
S1—C81.690 (2)C9—H9A0.9600
C1—C61.393 (3)C9—H9B0.9600
C1—C21.397 (3)C9—H9C0.9600
C7—N1—N2115.91 (17)C6—C5—C4119.05 (19)
C8—N2—N1119.51 (17)C6—C5—H5120.5
C8—N2—H2120.7 (17)C4—C5—H5120.5
N1—N2—H2119.8 (17)C5—C6—C1122.07 (19)
C8—N3—C9123.97 (19)C5—C6—H6119.0
C8—N3—H3118.4 (18)C1—C6—H6119.0
C9—N3—H3117.3 (18)N1—C7—C1119.52 (18)
C6—C1—C2116.50 (18)N1—C7—H7120.2
C6—C1—C7121.54 (17)C1—C7—H7120.2
C2—C1—C7121.95 (17)N3—C8—N2116.47 (18)
C3—C2—C1122.36 (18)N3—C8—S1124.78 (15)
C3—C2—Cl1117.13 (15)N2—C8—S1118.75 (15)
C1—C2—Cl1120.50 (15)N3—C9—H9A109.5
C4—C3—C2118.59 (19)N3—C9—H9B109.5
C4—C3—H3A120.7H9A—C9—H9B109.5
C2—C3—H3A120.7N3—C9—H9C109.5
C3—C4—C5121.40 (19)H9A—C9—H9C109.5
C3—C4—Cl2119.12 (17)H9B—C9—H9C109.5
C5—C4—Cl2119.47 (17)
D—H···AD—HH···AD···AD—H···A
N2—H2···S1i0.90 (1)2.54 (1)3.4169 (18)167 (2)
N3—H3···S1ii0.89 (1)2.77 (2)3.491 (2)139 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯S1i0.90 (1)2.54 (1)3.4169 (18)167 (2)
N3—H3⋯S1ii0.89 (1)2.77 (2)3.491 (2)139 (2)

Symmetry codes: (i) ; (ii) .

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