| Literature DB >> 21522629 |
Irena Matulková, Ivana Císařová, Ivan Němec.
Abstract
In the title salt, 2C(8)H(12)N(5) (+)·C(6)H(8)O(4) (2-)·4H(2)O, the anion is located on a centre of symmetry. The observed supra-molecular network of the crystal structure is produced by ten different hydrogen bonds of the N-H⋯N, N-H⋯O and O-H⋯O types. One additional O-H group is not connected to an acceptor site.Entities:
Year: 2010 PMID: 21522629 PMCID: PMC3050311 DOI: 10.1107/S1600536810049925
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 2C8H12N5+·C6H8O42−·4H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3257 reflections | |
| θ = 1.0–27.5° | |
| µ = 0.10 mm−1 | |
| α = 61.5590 (9)° | |
| β = 88.682 (1)° | Prism, colourless |
| γ = 71.702 (1)° | 0.4 × 0.4 × 0.3 mm |
| Nonius KappaCCD area-detector diffractometer | 2953 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.4°, θmin = 2.1° |
| Detector resolution: 9.091 pixels mm-1 | |
| ω and π scans to fill the Ewald sphere | |
| 20455 measured reflections | |
| 3260 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.25 e Å−3 | |
| 3260 reflections | Δρmin = −0.25 e Å−3 |
| 181 parameters |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 1.08265 (15) | 0.19532 (11) | 0.51868 (10) | 0.0166 (2) | |
| C2 | 1.02860 (14) | 0.43683 (11) | 0.33714 (10) | 0.0157 (2) | |
| N1 | 1.01068 (14) | 0.10880 (10) | 0.62783 (9) | 0.0198 (2) | |
| H1 | 0.9966 | 0.3356 | 0.2376 | 0.024* | |
| N2 | 1.23411 (14) | 0.12406 (10) | 0.47705 (10) | 0.0211 (2) | |
| H2A | 1.2927 | 0.0211 | 0.5352 | 0.025* | |
| H2B | 1.3012 | 0.1750 | 0.4191 | 0.025* | |
| N3 | 1.00775 (13) | 0.34344 (10) | 0.46586 (9) | 0.01745 (19) | |
| N4 | 1.03596 (14) | 0.56792 (10) | 0.31118 (9) | 0.0205 (2) | |
| H4A | 1.0268 | 0.5929 | 0.3779 | 0.025* | |
| H4B | 1.0357 | 0.6423 | 0.2236 | 0.025* | |
| N5 | 1.03464 (14) | 0.40864 (10) | 0.23239 (9) | 0.01899 (19) | |
| H5A | 1.0784 | 0.0048 | 0.6749 | 0.023* | |
| H5B | 1.0304 | 0.4875 | 0.1479 | 0.023* | |
| C3 | 0.83808 (15) | 0.16121 (11) | 0.67987 (11) | 0.0170 (2) | |
| C4 | 0.85199 (17) | 0.11060 (13) | 0.82069 (11) | 0.0232 (2) | |
| H4 | 0.9739 | 0.0489 | 0.8776 | 0.028* | |
| C5 | 0.68398 (18) | 0.15191 (14) | 0.87700 (12) | 0.0262 (2) | |
| H5 | 0.6938 | 0.1175 | 0.9715 | 0.031* | |
| C6 | 0.50251 (17) | 0.24393 (13) | 0.79302 (13) | 0.0246 (2) | |
| H6 | 0.3900 | 0.2708 | 0.8308 | 0.030* | |
| C7 | 0.48929 (17) | 0.29590 (14) | 0.65196 (13) | 0.0289 (3) | |
| H7 | 0.3678 | 0.3591 | 0.5950 | 0.035* | |
| C8 | 0.65620 (17) | 0.25428 (14) | 0.59510 (12) | 0.0251 (2) | |
| H8 | 0.6461 | 0.2886 | 0.5006 | 0.030* | |
| C9 | 0.65021 (15) | 0.26120 (11) | 0.25517 (10) | 0.0159 (2) | |
| C10 | 0.55128 (16) | 0.42815 (11) | 0.19755 (11) | 0.0185 (2) | |
| H10A | 0.6186 | 0.4595 | 0.2467 | 0.022* | |
| H10B | 0.4142 | 0.4488 | 0.2143 | 0.022* | |
| C11 | 0.55403 (16) | 0.51991 (11) | 0.04279 (10) | 0.0180 (2) | |
| H11A | 0.4914 | 0.6250 | 0.0133 | 0.022* | |
| H11B | 0.6910 | 0.5030 | 0.0260 | 0.022* | |
| O1 | 0.82344 (11) | 0.21203 (8) | 0.23165 (8) | 0.02091 (18) | |
| O2 | 0.55463 (12) | 0.17812 (8) | 0.32638 (8) | 0.02243 (18) | |
| O1W | 0.98182 (13) | 0.70284 (10) | 0.00316 (8) | 0.0287 (2) | |
| H11 | 1.0494 | 0.7325 | −0.0619 | 0.034* | |
| H12 | 0.8552 | 0.7580 | −0.0462 | 0.034* | |
| O2W | 0.40159 (15) | 0.11820 (11) | 0.13910 (10) | 0.0353 (2) | |
| H21 | 0.4200 | 0.0216 | 0.1821 | 0.042* | |
| H22 | 0.4504 | 0.1220 | 0.2138 | 0.042* |
| C1 | 0.0182 (5) | 0.0161 (5) | 0.0150 (5) | −0.0064 (4) | 0.0028 (4) | −0.0069 (4) |
| C2 | 0.0126 (4) | 0.0157 (5) | 0.0168 (5) | −0.0042 (4) | 0.0033 (4) | −0.0070 (4) |
| N1 | 0.0214 (4) | 0.0130 (4) | 0.0193 (4) | −0.0042 (3) | 0.0081 (4) | −0.0049 (3) |
| N2 | 0.0208 (5) | 0.0142 (4) | 0.0214 (4) | −0.0042 (3) | 0.0091 (4) | −0.0050 (4) |
| N3 | 0.0211 (4) | 0.0142 (4) | 0.0158 (4) | −0.0063 (3) | 0.0057 (3) | −0.0065 (3) |
| N4 | 0.0296 (5) | 0.0158 (4) | 0.0166 (4) | −0.0101 (4) | 0.0067 (4) | −0.0071 (4) |
| N5 | 0.0246 (5) | 0.0182 (4) | 0.0151 (4) | −0.0103 (4) | 0.0043 (3) | −0.0073 (3) |
| C3 | 0.0197 (5) | 0.0140 (5) | 0.0186 (5) | −0.0077 (4) | 0.0064 (4) | −0.0080 (4) |
| C4 | 0.0222 (5) | 0.0234 (5) | 0.0182 (5) | −0.0051 (4) | 0.0024 (4) | −0.0075 (4) |
| C5 | 0.0303 (6) | 0.0293 (6) | 0.0185 (5) | −0.0092 (5) | 0.0081 (4) | −0.0124 (5) |
| C6 | 0.0229 (5) | 0.0248 (6) | 0.0299 (6) | −0.0083 (4) | 0.0110 (5) | −0.0166 (5) |
| C7 | 0.0195 (6) | 0.0327 (6) | 0.0277 (6) | −0.0031 (5) | 0.0016 (5) | −0.0133 (5) |
| C8 | 0.0236 (6) | 0.0303 (6) | 0.0171 (5) | −0.0069 (5) | 0.0026 (4) | −0.0099 (5) |
| C9 | 0.0177 (5) | 0.0159 (5) | 0.0121 (4) | −0.0055 (4) | 0.0011 (4) | −0.0055 (4) |
| C10 | 0.0194 (5) | 0.0152 (5) | 0.0176 (5) | −0.0041 (4) | 0.0027 (4) | −0.0068 (4) |
| C11 | 0.0199 (5) | 0.0132 (5) | 0.0171 (5) | −0.0053 (4) | 0.0013 (4) | −0.0047 (4) |
| O1 | 0.0181 (4) | 0.0159 (4) | 0.0228 (4) | −0.0045 (3) | 0.0060 (3) | −0.0061 (3) |
| O2 | 0.0218 (4) | 0.0176 (4) | 0.0228 (4) | −0.0080 (3) | 0.0078 (3) | −0.0056 (3) |
| O1W | 0.0340 (5) | 0.0277 (4) | 0.0182 (4) | −0.0116 (4) | 0.0084 (3) | −0.0063 (3) |
| O2W | 0.0436 (5) | 0.0304 (5) | 0.0366 (5) | −0.0187 (4) | 0.0049 (4) | −0.0164 (4) |
| C1—N2 | 1.3347 (13) | C5—H5 | 0.9300 |
| C1—N3 | 1.3397 (13) | C6—C7 | 1.3877 (17) |
| C1—N1 | 1.3469 (13) | C6—H6 | 0.9300 |
| C2—N4 | 1.3303 (13) | C7—C8 | 1.3897 (16) |
| C2—N5 | 1.3370 (13) | C7—H7 | 0.9300 |
| C2—N3 | 1.3445 (13) | C8—H8 | 0.9300 |
| N1—C3 | 1.4233 (13) | C9—O2 | 1.2622 (13) |
| N1—H5A | 0.9432 | C9—O1 | 1.2623 (13) |
| N2—H2A | 0.9353 | C9—C10 | 1.5198 (14) |
| N2—H2B | 0.8755 | C10—C11 | 1.5299 (14) |
| N4—H4A | 0.8999 | C10—H10A | 0.9700 |
| N4—H4B | 0.9233 | C10—H10B | 0.9700 |
| N5—H1 | 0.8934 | C11—C11i | 1.527 (2) |
| N5—H5B | 0.9158 | C11—H11A | 0.9700 |
| C3—C4 | 1.3874 (15) | C11—H11B | 0.9700 |
| C3—C8 | 1.3888 (15) | O1W—H11 | 0.8499 |
| C4—C5 | 1.3911 (16) | O1W—H12 | 0.9225 |
| C4—H4 | 0.9300 | O2W—H21 | 0.8864 |
| C5—C6 | 1.3824 (17) | O2W—H22 | 0.9334 |
| N2—C1—N3 | 124.93 (9) | C4—C5—H5 | 119.9 |
| N2—C1—N1 | 116.20 (9) | C5—C6—C7 | 119.57 (10) |
| N3—C1—N1 | 118.73 (9) | C5—C6—H6 | 120.2 |
| N4—C2—N5 | 117.95 (9) | C7—C6—H6 | 120.2 |
| N4—C2—N3 | 117.89 (9) | C6—C7—C8 | 120.50 (11) |
| N5—C2—N3 | 124.12 (9) | C6—C7—H7 | 119.8 |
| C1—N1—C3 | 125.27 (9) | C8—C7—H7 | 119.8 |
| C1—N1—H5A | 118.6 | C3—C8—C7 | 119.77 (10) |
| C3—N1—H5A | 116.1 | C3—C8—H8 | 120.1 |
| C1—N2—H2A | 116.5 | C7—C8—H8 | 120.1 |
| C1—N2—H2B | 118.5 | O2—C9—O1 | 123.20 (9) |
| H2A—N2—H2B | 120.5 | O2—C9—C10 | 117.75 (9) |
| C1—N3—C2 | 121.23 (9) | O1—C9—C10 | 119.03 (9) |
| C2—N4—H4A | 120.7 | C9—C10—C11 | 113.44 (8) |
| C2—N4—H4B | 123.1 | C9—C10—H10A | 108.9 |
| H4A—N4—H4B | 115.8 | C11—C10—H10A | 108.9 |
| C2—N5—H1 | 121.2 | C9—C10—H10B | 108.9 |
| C2—N5—H5B | 114.6 | C11—C10—H10B | 108.9 |
| H1—N5—H5B | 119.8 | H10A—C10—H10B | 107.7 |
| C4—C3—C8 | 119.78 (10) | C11i—C11—C10 | 112.27 (11) |
| C4—C3—N1 | 118.26 (10) | C11i—C11—H11A | 109.2 |
| C8—C3—N1 | 121.87 (10) | C10—C11—H11A | 109.2 |
| C3—C4—C5 | 120.12 (11) | C11i—C11—H11B | 109.2 |
| C3—C4—H4 | 119.9 | C10—C11—H11B | 109.2 |
| C5—C4—H4 | 119.9 | H11A—C11—H11B | 107.9 |
| C6—C5—C4 | 120.25 (11) | H11—O1W—H12 | 99.6 |
| C6—C5—H5 | 119.9 | H21—O2W—H22 | 97.8 |
| H··· | ||||
| N5—H1···O1 | 0.89 | 2.12 | 2.982 (1) | 163 |
| N2—H2A···O2ii | 0.94 | 1.92 | 2.837 (1) | 168 |
| N2—H2B···O2iii | 0.88 | 2.07 | 2.855 (1) | 149 |
| N4—H4A···N3iv | 0.90 | 2.14 | 3.041 (1) | 178 |
| N4—H4B···O1W | 0.92 | 2.23 | 2.998 (1) | 141 |
| N1—H5A···O1ii | 0.94 | 1.95 | 2.882 (1) | 171 |
| N5—H5B···O1W | 0.92 | 2.03 | 2.897 (1) | 158 |
| O1W—H11···O1v | 0.85 | 1.99 | 2.825 (1) | 168 |
| O1W—H12···O2Wi | 0.92 | 1.86 | 2.781 (1) | 174 |
| O2W—H22···O2 | 0.93 | 1.89 | 2.797 (1) | 165 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H1⋯O1 | 0.89 | 2.12 | 2.982 (1) | 163 |
| N2—H2 | 0.94 | 1.92 | 2.837 (1) | 168 |
| N2—H2 | 0.88 | 2.07 | 2.855 (1) | 149 |
| N4—H4 | 0.90 | 2.14 | 3.041 (1) | 178 |
| N4—H4 | 0.92 | 2.23 | 2.998 (1) | 141 |
| N1—H5 | 0.94 | 1.95 | 2.882 (1) | 171 |
| N5—H5 | 0.92 | 2.03 | 2.897 (1) | 158 |
| O1 | 0.85 | 1.99 | 2.825 (1) | 168 |
| O1 | 0.92 | 1.86 | 2.781 (1) | 174 |
| O2 | 0.93 | 1.89 | 2.797 (1) | 165 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .