Literature DB >> 21522422

1,3-Dimethyl-3-tetra-decyl-1H-1,5-benzodiazepine-2,4(3H,5H)-dione.

Rachid Dardouri, Fouad Ouazzani Chahdi, Natalie Saffon, El Mokhtar Essassi, Seik Weng Ng.   

Abstract

The seven-membered ring of the title compound, C(25)H(40)N(2)O(2), adopts a boat-shaped conformation (with the C atoms of the fused-ring as the stern and the methine C atom as the prow). The tetra-decyl substituent occupies an equatorial position, with the tetra-dodecyl chain exhibibiting an an all-trans conformation.

Entities:  

Year:  2011        PMID: 21522422      PMCID: PMC3052003          DOI: 10.1107/S1600536811005782

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of the 12-bromo­dodecyl-substituted analog, see: Dardouri et al. (2010 ▶).

Experimental

Crystal data

C25H40N2O2 M = 400.59 Monoclinic, a = 8.1286 (1) Å b = 33.5899 (5) Å c = 9.4095 (2) Å β = 114.640 (1)° V = 2335.22 (7) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 295 K 0.20 × 0.02 × 0.02 mm

Data collection

Bruker X8 APEXII diffractometer 29471 measured reflections 5359 independent reflections 3671 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.139 S = 1.03 5359 reflections 264 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811005782/bt5477sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005782/bt5477Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H40N2O2F(000) = 880
Mr = 400.59Dx = 1.139 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5173 reflections
a = 8.1286 (1) Åθ = 2.5–26.9°
b = 33.5899 (5) ŵ = 0.07 mm1
c = 9.4095 (2) ÅT = 295 K
β = 114.640 (1)°Plate, colorless
V = 2335.22 (7) Å30.20 × 0.02 × 0.02 mm
Z = 4
Bruker X8 APEXII diffractometer3671 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.044
graphiteθmax = 27.5°, θmin = 2.5°
φ and ω scansh = −10→10
29471 measured reflectionsk = −43→43
5359 independent reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0639P)2 + 0.5157P] where P = (Fo2 + 2Fc2)/3
5359 reflections(Δ/σ)max = 0.001
264 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.19 e Å3
xyzUiso*/Ueq
O10.17583 (14)0.70600 (3)0.42788 (12)0.0335 (3)
O2−0.24455 (15)0.66528 (3)0.46476 (13)0.0383 (3)
N1−0.04415 (16)0.72024 (4)0.19047 (14)0.0286 (3)
N2−0.36308 (16)0.69006 (4)0.21941 (14)0.0280 (3)
C1−0.2029 (2)0.70901 (4)0.05774 (17)0.0288 (3)
C2−0.2041 (3)0.71320 (5)−0.09017 (19)0.0405 (4)
H2−0.10150.7227−0.09940.049*
C3−0.3559 (3)0.70346 (6)−0.2228 (2)0.0492 (5)
H3−0.35470.7059−0.32080.059*
C4−0.5087 (3)0.69014 (5)−0.2098 (2)0.0485 (5)
H4−0.61160.6839−0.29920.058*
C5−0.5099 (2)0.68592 (5)−0.06424 (19)0.0393 (4)
H5−0.61440.6770−0.05670.047*
C6−0.3568 (2)0.69484 (4)0.07174 (17)0.0281 (3)
C7−0.2317 (2)0.67078 (4)0.34230 (17)0.0261 (3)
C8−0.06497 (19)0.65811 (4)0.31754 (16)0.0240 (3)
H8−0.10440.64530.21500.029*
C90.03579 (19)0.69634 (4)0.31786 (16)0.0253 (3)
C10−0.5273 (2)0.70170 (5)0.2374 (2)0.0408 (4)
H10A−0.49480.71210.34070.061*
H10B−0.60410.67890.22170.061*
H10C−0.59070.72180.16160.061*
C110.0474 (2)0.75737 (5)0.1834 (2)0.0390 (4)
H11A0.12480.76580.28750.059*
H11B−0.04130.77760.13300.059*
H11C0.11850.75300.12510.059*
C120.0535 (2)0.62912 (5)0.44311 (17)0.0282 (3)
H12A0.10260.64260.54330.034*
H12B−0.02070.60720.44990.034*
C130.2087 (2)0.61250 (5)0.41109 (17)0.0320 (4)
H13A0.27580.63450.39390.038*
H13B0.15940.59680.31600.038*
C140.3380 (2)0.58674 (5)0.54351 (17)0.0303 (3)
H14A0.38480.60230.63900.036*
H14B0.27110.56450.55900.036*
C150.4961 (2)0.57070 (5)0.51467 (18)0.0314 (4)
H15A0.56190.59290.49740.038*
H15B0.44960.55470.42030.038*
C160.6259 (2)0.54562 (5)0.64913 (17)0.0304 (3)
H16A0.55940.52370.66720.037*
H16B0.67320.56180.74310.037*
C170.7836 (2)0.52895 (5)0.62100 (17)0.0302 (3)
H17A0.84860.55080.60070.036*
H17B0.73650.51230.52850.036*
C180.9155 (2)0.50462 (5)0.75784 (17)0.0307 (3)
H18A0.96180.52130.85050.037*
H18B0.85050.48270.77770.037*
C191.0743 (2)0.48805 (5)0.73090 (17)0.0309 (3)
H19A1.13510.50980.70480.037*
H19B1.02860.47010.64220.037*
C201.2114 (2)0.46592 (5)0.87169 (18)0.0331 (4)
H20A1.25630.48390.96040.040*
H20B1.15030.44410.89750.040*
C211.3712 (2)0.44929 (5)0.84705 (18)0.0333 (4)
H21A1.42660.47060.81280.040*
H21B1.32760.42960.76430.040*
C221.5143 (2)0.43030 (5)0.99273 (18)0.0323 (4)
H22A1.45840.40921.02760.039*
H22B1.55870.45011.07500.039*
C231.6742 (2)0.41310 (5)0.96896 (18)0.0332 (4)
H23A1.63180.39140.89420.040*
H23B1.72340.43350.92480.040*
C241.8235 (2)0.39779 (5)1.11869 (19)0.0349 (4)
H24A1.77180.37921.16780.042*
H24B1.87330.42001.18980.042*
C251.9760 (3)0.37722 (6)1.0943 (3)0.0550 (5)
H25A2.06600.36851.19330.083*
H25B2.02950.39551.04740.083*
H25C1.92880.35471.02670.083*
U11U22U33U12U13U23
O10.0262 (6)0.0391 (6)0.0304 (6)−0.0010 (5)0.0069 (5)0.0018 (5)
O20.0396 (7)0.0461 (7)0.0365 (6)0.0029 (5)0.0229 (5)0.0055 (5)
N10.0229 (7)0.0311 (7)0.0305 (7)0.0021 (5)0.0099 (5)0.0082 (5)
N20.0206 (6)0.0278 (6)0.0359 (7)0.0023 (5)0.0121 (5)0.0007 (5)
C10.0275 (8)0.0286 (8)0.0271 (7)0.0093 (6)0.0084 (6)0.0047 (6)
C20.0442 (10)0.0446 (10)0.0330 (9)0.0161 (8)0.0164 (8)0.0131 (7)
C30.0654 (13)0.0466 (11)0.0275 (8)0.0204 (10)0.0113 (9)0.0077 (8)
C40.0525 (12)0.0354 (9)0.0321 (9)0.0075 (8)−0.0075 (8)−0.0010 (7)
C50.0333 (9)0.0291 (8)0.0401 (9)0.0025 (7)−0.0001 (7)0.0024 (7)
C60.0271 (8)0.0216 (7)0.0307 (8)0.0058 (6)0.0071 (6)0.0013 (6)
C70.0248 (8)0.0240 (7)0.0300 (7)−0.0013 (6)0.0119 (6)−0.0012 (6)
C80.0242 (8)0.0260 (7)0.0213 (7)0.0034 (6)0.0090 (6)0.0018 (6)
C90.0225 (8)0.0300 (8)0.0250 (7)0.0041 (6)0.0115 (6)0.0013 (6)
C100.0275 (9)0.0382 (9)0.0611 (11)0.0025 (7)0.0227 (8)0.0008 (8)
C110.0305 (9)0.0395 (9)0.0488 (10)−0.0003 (7)0.0182 (8)0.0147 (8)
C120.0282 (8)0.0300 (8)0.0262 (7)0.0061 (6)0.0111 (6)0.0068 (6)
C130.0350 (9)0.0324 (8)0.0286 (8)0.0109 (7)0.0133 (7)0.0076 (6)
C140.0301 (8)0.0313 (8)0.0286 (8)0.0078 (6)0.0115 (7)0.0062 (6)
C150.0300 (8)0.0331 (8)0.0303 (8)0.0081 (6)0.0117 (7)0.0064 (6)
C160.0277 (8)0.0339 (8)0.0288 (8)0.0060 (6)0.0108 (7)0.0053 (6)
C170.0279 (8)0.0327 (8)0.0289 (8)0.0051 (6)0.0108 (7)0.0042 (6)
C180.0275 (8)0.0328 (8)0.0312 (8)0.0064 (6)0.0118 (7)0.0074 (6)
C190.0296 (9)0.0327 (8)0.0296 (8)0.0063 (7)0.0114 (7)0.0043 (6)
C200.0301 (9)0.0368 (9)0.0330 (8)0.0081 (7)0.0138 (7)0.0071 (7)
C210.0312 (9)0.0366 (9)0.0308 (8)0.0079 (7)0.0117 (7)0.0041 (7)
C220.0300 (9)0.0345 (8)0.0323 (8)0.0069 (7)0.0130 (7)0.0046 (7)
C230.0319 (9)0.0343 (8)0.0345 (8)0.0079 (7)0.0149 (7)0.0051 (7)
C240.0284 (8)0.0312 (8)0.0399 (9)0.0024 (7)0.0091 (7)0.0006 (7)
C250.0388 (11)0.0557 (12)0.0656 (13)0.0178 (9)0.0169 (10)0.0056 (10)
O1—C91.2208 (17)C14—H14A0.9700
O2—C71.2139 (18)C14—H14B0.9700
N1—C91.3618 (18)C15—C161.520 (2)
N1—C11.4228 (19)C15—H15A0.9700
N1—C111.468 (2)C15—H15B0.9700
N2—C71.3666 (19)C16—C171.520 (2)
N2—C61.421 (2)C16—H16A0.9700
N2—C101.467 (2)C16—H16B0.9700
C1—C21.395 (2)C17—C181.525 (2)
C1—C61.395 (2)C17—H17A0.9700
C2—C31.379 (3)C17—H17B0.9700
C2—H20.9300C18—C191.521 (2)
C3—C41.373 (3)C18—H18A0.9700
C3—H30.9300C18—H18B0.9700
C4—C51.381 (3)C19—C201.523 (2)
C4—H40.9300C19—H19A0.9700
C5—C61.396 (2)C19—H19B0.9700
C5—H50.9300C20—C211.519 (2)
C7—C81.528 (2)C20—H20A0.9700
C8—C91.522 (2)C20—H20B0.9700
C8—C121.5242 (19)C21—C221.520 (2)
C8—H80.9800C21—H21A0.9700
C10—H10A0.9600C21—H21B0.9700
C10—H10B0.9600C22—C231.522 (2)
C10—H10C0.9600C22—H22A0.9700
C11—H11A0.9600C22—H22B0.9700
C11—H11B0.9600C23—C241.516 (2)
C11—H11C0.9600C23—H23A0.9700
C12—C131.520 (2)C23—H23B0.9700
C12—H12A0.9700C24—C251.517 (2)
C12—H12B0.9700C24—H24A0.9700
C13—C141.5210 (19)C24—H24B0.9700
C13—H13A0.9700C25—H25A0.9600
C13—H13B0.9700C25—H25B0.9600
C14—C151.519 (2)C25—H25C0.9600
C9—N1—C1122.79 (13)C14—C15—C16113.18 (13)
C9—N1—C11118.43 (13)C14—C15—H15A108.9
C1—N1—C11118.49 (12)C16—C15—H15A108.9
C7—N2—C6123.17 (12)C14—C15—H15B108.9
C7—N2—C10117.17 (13)C16—C15—H15B108.9
C6—N2—C10119.21 (13)H15A—C15—H15B107.8
C2—C1—C6119.69 (15)C15—C16—C17113.74 (13)
C2—C1—N1118.38 (15)C15—C16—H16A108.8
C6—C1—N1121.92 (13)C17—C16—H16A108.8
C3—C2—C1120.69 (18)C15—C16—H16B108.8
C3—C2—H2119.7C17—C16—H16B108.8
C1—C2—H2119.7H16A—C16—H16B107.7
C4—C3—C2119.84 (17)C16—C17—C18113.44 (13)
C4—C3—H3120.1C16—C17—H17A108.9
C2—C3—H3120.1C18—C17—H17A108.9
C3—C4—C5120.19 (16)C16—C17—H17B108.9
C3—C4—H4119.9C18—C17—H17B108.9
C5—C4—H4119.9H17A—C17—H17B107.7
C4—C5—C6120.97 (18)C19—C18—C17113.73 (13)
C4—C5—H5119.5C19—C18—H18A108.8
C6—C5—H5119.5C17—C18—H18A108.8
C1—C6—C5118.59 (15)C19—C18—H18B108.8
C1—C6—N2122.00 (13)C17—C18—H18B108.8
C5—C6—N2119.39 (15)H18A—C18—H18B107.7
O2—C7—N2121.93 (14)C18—C19—C20113.43 (13)
O2—C7—C8122.37 (13)C18—C19—H19A108.9
N2—C7—C8115.66 (12)C20—C19—H19A108.9
C9—C8—C12111.82 (12)C18—C19—H19B108.9
C9—C8—C7105.98 (11)C20—C19—H19B108.9
C12—C8—C7111.95 (12)H19A—C19—H19B107.7
C9—C8—H8109.0C21—C20—C19114.14 (13)
C12—C8—H8109.0C21—C20—H20A108.7
C7—C8—H8109.0C19—C20—H20A108.7
O1—C9—N1121.58 (14)C21—C20—H20B108.7
O1—C9—C8122.46 (13)C19—C20—H20B108.7
N1—C9—C8115.90 (12)H20A—C20—H20B107.6
N2—C10—H10A109.5C20—C21—C22113.48 (13)
N2—C10—H10B109.5C20—C21—H21A108.9
H10A—C10—H10B109.5C22—C21—H21A108.9
N2—C10—H10C109.5C20—C21—H21B108.9
H10A—C10—H10C109.5C22—C21—H21B108.9
H10B—C10—H10C109.5H21A—C21—H21B107.7
N1—C11—H11A109.5C21—C22—C23113.96 (13)
N1—C11—H11B109.5C21—C22—H22A108.8
H11A—C11—H11B109.5C23—C22—H22A108.8
N1—C11—H11C109.5C21—C22—H22B108.8
H11A—C11—H11C109.5C23—C22—H22B108.8
H11B—C11—H11C109.5H22A—C22—H22B107.7
C13—C12—C8112.92 (12)C24—C23—C22113.22 (13)
C13—C12—H12A109.0C24—C23—H23A108.9
C8—C12—H12A109.0C22—C23—H23A108.9
C13—C12—H12B109.0C24—C23—H23B108.9
C8—C12—H12B109.0C22—C23—H23B108.9
H12A—C12—H12B107.8H23A—C23—H23B107.7
C12—C13—C14113.18 (12)C23—C24—C25113.69 (15)
C12—C13—H13A108.9C23—C24—H24A108.8
C14—C13—H13A108.9C25—C24—H24A108.8
C12—C13—H13B108.9C23—C24—H24B108.8
C14—C13—H13B108.9C25—C24—H24B108.8
H13A—C13—H13B107.8H24A—C24—H24B107.7
C15—C14—C13113.74 (12)C24—C25—H25A109.5
C15—C14—H14A108.8C24—C25—H25B109.5
C13—C14—H14A108.8H25A—C25—H25B109.5
C15—C14—H14B108.8C24—C25—H25C109.5
C13—C14—H14B108.8H25A—C25—H25C109.5
H14A—C14—H14B107.7H25B—C25—H25C109.5
C9—N1—C1—C2−130.73 (16)O2—C7—C8—C1215.1 (2)
C11—N1—C1—C243.0 (2)N2—C7—C8—C12−167.19 (12)
C9—N1—C1—C650.6 (2)C1—N1—C9—O1177.20 (14)
C11—N1—C1—C6−135.64 (15)C11—N1—C9—O13.4 (2)
C6—C1—C2—C30.0 (2)C1—N1—C9—C8−5.7 (2)
N1—C1—C2—C3−178.74 (15)C11—N1—C9—C8−179.47 (13)
C1—C2—C3—C41.1 (3)C12—C8—C9—O1−16.4 (2)
C2—C3—C4—C5−0.9 (3)C7—C8—C9—O1105.85 (15)
C3—C4—C5—C6−0.4 (3)C12—C8—C9—N1166.53 (12)
C2—C1—C6—C5−1.2 (2)C7—C8—C9—N1−71.22 (15)
N1—C1—C6—C5177.45 (13)C9—C8—C12—C13−67.67 (16)
C2—C1—C6—N2−179.89 (14)C7—C8—C12—C13173.57 (13)
N1—C1—C6—N2−1.2 (2)C8—C12—C13—C14174.38 (13)
C4—C5—C6—C11.4 (2)C12—C13—C14—C15−178.69 (14)
C4—C5—C6—N2−179.87 (14)C13—C14—C15—C16178.98 (14)
C7—N2—C6—C1−49.2 (2)C14—C15—C16—C17179.30 (14)
C10—N2—C6—C1138.72 (15)C15—C16—C17—C18178.70 (13)
C7—N2—C6—C5132.13 (15)C16—C17—C18—C19−179.64 (13)
C10—N2—C6—C5−39.9 (2)C17—C18—C19—C20176.52 (13)
C6—N2—C7—O2−176.13 (14)C18—C19—C20—C21−179.80 (14)
C10—N2—C7—O2−3.9 (2)C19—C20—C21—C22175.23 (14)
C6—N2—C7—C86.2 (2)C20—C21—C22—C23179.33 (14)
C10—N2—C7—C8178.37 (13)C21—C22—C23—C24174.57 (14)
O2—C7—C8—C9−107.07 (15)C22—C23—C24—C25174.79 (15)
N2—C7—C8—C970.64 (15)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3-(12-Bromo-dodec-yl)-1,5-dimethyl-1H-1,5-benzodiazepine-2,4(3H,5H)-dione.

Authors:  Rchida Dardouri; Fouad Ouazzani Chahdi; Natalie Saffon; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-13
  2 in total
  3 in total

1.  3-{[3-(4-Chloro-phen-yl)-4,5-dihydro-1,2-oxazol-5-yl]meth-yl}-1,5-dimethyl-1H-1,5-benzodiazepine-2,4(3H,5H)-dione.

Authors:  Rachida Dardouri; Youssef Kandri Rodi; Sonia Ladeira; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-26

2.  3-Hexadecyl-1,5-dimethyl-1H-1,5-benzo-diazepine-2,4(3H,5H)-dione.

Authors:  Rachida Dardouri; Youssef Kandri Rodi; Sonia Ladeira; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-16

3.  Crystal structure and Hirshfeld surface analysis of 3,4-dihydro-2-(2,4-dioxo-6-methylpyran-3-ylidene)-4-(4-pyridin-4-yl)-1,5-benzodiazepine.

Authors:  Lhoussaine El Ghayati; Youssef Ramli; Tuncer Hökelek; Mohamed Labd Taha; Joel T Mague; El Mokhtar Essassi
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-01-01
  3 in total

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