| Literature DB >> 21522415 |
Mehrdad Pourayoubi1, Anahid Saneei.
Abstract
In the title compound, C(8)H(17)ClF(2)N(3)O(2)P, the phosphoryl group and the NH unit of the C(O)NHP(O) moiety adopt a syn conformation with respect to each other. The P atom is in a tetra-hedral coordination environment and the environment of the N atom of the C(O)NHP(O) moiety is essentially planar. In the crystal, adjacent mol-ecules are linked via N-H⋯O =P and N-H⋯O =C hydrogen bonds, building R(2) (2)(8) and R(2) (2)(12) rings in a linear arrangement parallel to [110].Entities:
Year: 2011 PMID: 21522415 PMCID: PMC3052045 DOI: 10.1107/S1600536811005435
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H17ClF2N3O2P | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2867 reflections | |
| θ = 2.3–30.9° | |
| µ = 0.42 mm−1 | |
| α = 99.784 (2)° | |
| β = 105.999 (2)° | Prizm, colorless |
| γ = 110.770 (2)° | 0.26 × 0.19 × 0.16 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 4218 independent reflections |
| Radiation source: fine-focus sealed tube | 3337 reflections with |
| graphite | |
| φ and ω scans | θmax = 31.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 9089 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4218 reflections | (Δ/σ)max < 0.001 |
| 158 parameters | Δρmax = 0.56 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| P1 | 0.23257 (4) | 0.86972 (4) | 0.03714 (4) | 0.01390 (8) | |
| Cl1 | 0.30477 (6) | 0.56630 (4) | −0.36890 (4) | 0.03081 (10) | |
| F1 | 0.54717 (11) | 0.63181 (10) | −0.11562 (10) | 0.0284 (2) | |
| F2 | 0.31465 (14) | 0.40675 (9) | −0.19141 (11) | 0.0322 (2) | |
| O1 | 0.10801 (14) | 0.52987 (10) | −0.10574 (11) | 0.0238 (2) | |
| O2 | 0.37834 (13) | 1.03015 (10) | 0.10823 (10) | 0.0196 (2) | |
| N1 | 0.33089 (14) | 0.77459 (12) | −0.05183 (12) | 0.0146 (2) | |
| H1 | 0.4368 | 0.8292 | −0.0609 | 0.018* | |
| N2 | 0.03816 (15) | 0.83557 (13) | −0.09290 (12) | 0.0182 (2) | |
| H2 | −0.0483 | 0.8420 | −0.0661 | 0.022* | |
| N3 | 0.16459 (15) | 0.79008 (12) | 0.15566 (12) | 0.0155 (2) | |
| H3 | 0.0753 | 0.6993 | 0.1225 | 0.019* | |
| C1 | 0.25344 (17) | 0.61960 (14) | −0.10878 (14) | 0.0153 (2) | |
| C2 | 0.36184 (19) | 0.55503 (15) | −0.18656 (15) | 0.0192 (3) | |
| C3 | 0.02381 (19) | 0.84469 (16) | −0.24394 (15) | 0.0201 (3) | |
| H3A | 0.0704 | 0.7721 | −0.2874 | 0.024* | |
| C4 | −0.1816 (2) | 0.78961 (18) | −0.33779 (16) | 0.0259 (3) | |
| H4A | −0.2525 | 0.6837 | −0.3386 | 0.039* | |
| H4B | −0.1939 | 0.7916 | −0.4394 | 0.039* | |
| H4C | −0.2309 | 0.8581 | −0.2959 | 0.039* | |
| C5 | 0.1427 (2) | 1.00657 (18) | −0.24315 (16) | 0.0262 (3) | |
| H5A | 0.2750 | 1.0341 | −0.1889 | 0.039* | |
| H5B | 0.1051 | 1.0809 | −0.1947 | 0.039* | |
| H5C | 0.1246 | 1.0090 | −0.3453 | 0.039* | |
| C6 | 0.29579 (18) | 0.82087 (16) | 0.30596 (15) | 0.0208 (3) | |
| H6A | 0.3976 | 0.9277 | 0.3361 | 0.025* | |
| C7 | 0.1941 (2) | 0.81568 (18) | 0.41385 (16) | 0.0268 (3) | |
| H7A | 0.1366 | 0.8888 | 0.4081 | 0.040* | |
| H7B | 0.2834 | 0.8442 | 0.5148 | 0.040* | |
| H7C | 0.0965 | 0.7108 | 0.3884 | 0.040* | |
| C8 | 0.3848 (3) | 0.7080 (2) | 0.3090 (2) | 0.0390 (4) | |
| H8A | 0.4568 | 0.7195 | 0.2437 | 0.058* | |
| H8B | 0.2867 | 0.6020 | 0.2749 | 0.058* | |
| H8C | 0.4685 | 0.7294 | 0.4105 | 0.058* |
| P1 | 0.01625 (15) | 0.00992 (14) | 0.01683 (16) | 0.00349 (11) | 0.01039 (12) | 0.00433 (11) |
| Cl1 | 0.0425 (2) | 0.0345 (2) | 0.02119 (18) | 0.01780 (18) | 0.01803 (16) | 0.00824 (15) |
| F1 | 0.0208 (4) | 0.0305 (5) | 0.0358 (5) | 0.0133 (4) | 0.0117 (4) | 0.0065 (4) |
| F2 | 0.0469 (6) | 0.0162 (4) | 0.0489 (6) | 0.0186 (4) | 0.0300 (5) | 0.0147 (4) |
| O1 | 0.0247 (5) | 0.0128 (4) | 0.0318 (5) | 0.0005 (4) | 0.0187 (4) | 0.0040 (4) |
| O2 | 0.0237 (5) | 0.0115 (4) | 0.0233 (5) | 0.0026 (4) | 0.0158 (4) | 0.0030 (4) |
| N1 | 0.0148 (5) | 0.0108 (5) | 0.0195 (5) | 0.0034 (4) | 0.0109 (4) | 0.0043 (4) |
| N2 | 0.0203 (5) | 0.0223 (5) | 0.0191 (5) | 0.0112 (5) | 0.0126 (4) | 0.0091 (4) |
| N3 | 0.0153 (5) | 0.0125 (5) | 0.0161 (5) | 0.0012 (4) | 0.0081 (4) | 0.0042 (4) |
| C1 | 0.0178 (6) | 0.0119 (5) | 0.0171 (6) | 0.0054 (5) | 0.0089 (5) | 0.0047 (4) |
| C2 | 0.0243 (7) | 0.0134 (6) | 0.0246 (7) | 0.0089 (5) | 0.0131 (5) | 0.0076 (5) |
| C3 | 0.0255 (7) | 0.0244 (7) | 0.0177 (6) | 0.0151 (6) | 0.0118 (5) | 0.0076 (5) |
| C4 | 0.0262 (7) | 0.0281 (7) | 0.0222 (7) | 0.0131 (6) | 0.0066 (6) | 0.0045 (6) |
| C5 | 0.0276 (7) | 0.0329 (8) | 0.0226 (7) | 0.0121 (6) | 0.0129 (6) | 0.0148 (6) |
| C6 | 0.0176 (6) | 0.0220 (6) | 0.0180 (6) | 0.0032 (5) | 0.0057 (5) | 0.0069 (5) |
| C7 | 0.0352 (8) | 0.0334 (8) | 0.0180 (6) | 0.0181 (7) | 0.0124 (6) | 0.0099 (6) |
| C8 | 0.0395 (9) | 0.0669 (12) | 0.0355 (9) | 0.0384 (9) | 0.0212 (8) | 0.0278 (9) |
| P1—O2 | 1.4768 (9) | C3—H3A | 1.0000 |
| P1—N3 | 1.6190 (11) | C4—H4A | 0.9800 |
| P1—N2 | 1.6262 (12) | C4—H4B | 0.9800 |
| P1—N1 | 1.7039 (11) | C4—H4C | 0.9800 |
| Cl1—C2 | 1.7566 (14) | C5—H5A | 0.9800 |
| F1—C2 | 1.3366 (16) | C5—H5B | 0.9800 |
| F2—C2 | 1.3351 (15) | C5—H5C | 0.9800 |
| O1—C1 | 1.2127 (15) | C6—C8 | 1.513 (2) |
| N1—C1 | 1.3447 (15) | C6—C7 | 1.5164 (19) |
| N1—H1 | 0.8800 | C6—H6A | 1.0000 |
| N2—C3 | 1.4775 (17) | C7—H7A | 0.9800 |
| N2—H2 | 0.8390 | C7—H7B | 0.9800 |
| N3—C6 | 1.4754 (17) | C7—H7C | 0.9800 |
| N3—H3 | 0.8536 | C8—H8A | 0.9800 |
| C1—C2 | 1.5399 (17) | C8—H8B | 0.9800 |
| C3—C5 | 1.520 (2) | C8—H8C | 0.9800 |
| C3—C4 | 1.5207 (19) | ||
| O2—P1—N3 | 112.27 (5) | C3—C4—H4A | 109.5 |
| O2—P1—N2 | 119.69 (6) | C3—C4—H4B | 109.5 |
| N3—P1—N2 | 103.94 (6) | H4A—C4—H4B | 109.5 |
| O2—P1—N1 | 105.13 (5) | C3—C4—H4C | 109.5 |
| N3—P1—N1 | 112.31 (5) | H4A—C4—H4C | 109.5 |
| N2—P1—N1 | 103.30 (6) | H4B—C4—H4C | 109.5 |
| C1—N1—P1 | 122.76 (9) | C3—C5—H5A | 109.5 |
| C1—N1—H1 | 118.6 | C3—C5—H5B | 109.5 |
| P1—N1—H1 | 118.6 | H5A—C5—H5B | 109.5 |
| C3—N2—P1 | 123.77 (9) | C3—C5—H5C | 109.5 |
| C3—N2—H2 | 116.2 | H5A—C5—H5C | 109.5 |
| P1—N2—H2 | 117.0 | H5B—C5—H5C | 109.5 |
| C6—N3—P1 | 121.89 (8) | N3—C6—C8 | 111.29 (12) |
| C6—N3—H3 | 112.7 | N3—C6—C7 | 109.51 (11) |
| P1—N3—H3 | 117.9 | C8—C6—C7 | 111.49 (12) |
| O1—C1—N1 | 126.01 (12) | N3—C6—H6A | 108.1 |
| O1—C1—C2 | 118.79 (11) | C8—C6—H6A | 108.1 |
| N1—C1—C2 | 115.19 (10) | C7—C6—H6A | 108.1 |
| F2—C2—F1 | 107.66 (11) | C6—C7—H7A | 109.5 |
| F2—C2—C1 | 109.72 (10) | C6—C7—H7B | 109.5 |
| F1—C2—C1 | 112.14 (11) | H7A—C7—H7B | 109.5 |
| F2—C2—Cl1 | 108.56 (10) | C6—C7—H7C | 109.5 |
| F1—C2—Cl1 | 108.94 (9) | H7A—C7—H7C | 109.5 |
| C1—C2—Cl1 | 109.74 (9) | H7B—C7—H7C | 109.5 |
| N2—C3—C5 | 111.99 (11) | C6—C8—H8A | 109.5 |
| N2—C3—C4 | 108.48 (11) | C6—C8—H8B | 109.5 |
| C5—C3—C4 | 112.00 (12) | H8A—C8—H8B | 109.5 |
| N2—C3—H3A | 108.1 | C6—C8—H8C | 109.5 |
| C5—C3—H3A | 108.1 | H8A—C8—H8C | 109.5 |
| C4—C3—H3A | 108.1 | H8B—C8—H8C | 109.5 |
| O2—P1—N1—C1 | 168.43 (10) | O1—C1—C2—F2 | −22.92 (17) |
| N3—P1—N1—C1 | 46.05 (12) | N1—C1—C2—F2 | 158.19 (11) |
| N2—P1—N1—C1 | −65.33 (11) | O1—C1—C2—F1 | −142.50 (13) |
| O2—P1—N2—C3 | 72.29 (12) | N1—C1—C2—F1 | 38.60 (15) |
| N3—P1—N2—C3 | −161.47 (10) | O1—C1—C2—Cl1 | 96.28 (13) |
| N1—P1—N2—C3 | −44.04 (11) | N1—C1—C2—Cl1 | −82.62 (12) |
| O2—P1—N3—C6 | −36.29 (12) | P1—N2—C3—C5 | −61.53 (14) |
| N2—P1—N3—C6 | −167.07 (10) | P1—N2—C3—C4 | 174.35 (9) |
| N1—P1—N3—C6 | 81.94 (11) | P1—N3—C6—C8 | −89.23 (13) |
| P1—N1—C1—O1 | 0.56 (19) | P1—N3—C6—C7 | 147.05 (10) |
| P1—N1—C1—C2 | 179.37 (9) |
| H··· | ||||
| N1—H1···O2i | 0.88 | 1.87 | 2.7295 (13) | 164 |
| N3—H3···O1ii | 0.85 | 2.14 | 2.9645 (14) | 163 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O2i | 0.88 | 1.87 | 2.7295 (13) | 164 |
| N3—H3⋯O1ii | 0.85 | 2.14 | 2.9645 (14) | 163 |
Symmetry codes: (i) ; (ii) .