| Literature DB >> 21522374 |
Afshan Banu, Mohamed Ziaulla, Noor Shahina Begum, Ravi S Lamani, I M Khazi.
Abstract
In the title compound, C(18)H(11)ClN(4)OS, the benzisoxazole and imidazothia-diazole rings are inclined at an angle of 23.81 (7)° with respect to each other. The imidazothia-diazole and chloro-phenyl rings make a dihedral angle of 27.34 (3)°. In the crystal, inter-molecular C-H⋯N inter-actions generate a chain along the c axis and C-H⋯O inter-actions form centrosymmetric dimers resulting in an R(2) (2)(26) graph-set motif. Moreover, the C-H⋯N and S⋯N [3.206 (4) Å] inter-actions links the mol-ecules into R(7) ring motifs. The packing is further stabilized by π-π stacking inter-actions between the thia-diazole rings with a shortest centroid-centroid distance of 3.497 (3) Å. In addition, C-H⋯π inter-actions are observed in the crystal structure.Entities:
Year: 2011 PMID: 21522374 PMCID: PMC3052169 DOI: 10.1107/S1600536811004582
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H11ClN4OS | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3379 reflections |
| θ = 2.2–27.0° | |
| µ = 0.39 mm−1 | |
| β = 108.004 (5)° | Block, yellow |
| 0.18 × 0.16 × 0.16 mm | |
| Bruker SMART APEX CCD detector diffractometer | 3379 independent reflections |
| Radiation source: fine-focus sealed tube | 2587 reflections with |
| graphite | |
| ω scans | θmax = 27.0°, θmin = 2.2° |
| Absorption correction: multi-scan Bruker Smart Apex | |
| 8822 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3379 reflections | (Δ/σ)max < 0.001 |
| 226 parameters | Δρmax = 0.74 e Å−3 |
| 0 restraints | Δρmin = −0.58 e Å−3 |
| Experimental. The compound was synthesized by following the procedure given in Lamani |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.19871 (8) | 0.2236 (5) | 0.1424 (2) | 0.0151 (6) | |
| C2 | 0.16451 (8) | 0.1564 (5) | 0.1657 (2) | 0.0183 (7) | |
| H2A | 0.1565 | 0.0071 | 0.1366 | 0.022* | |
| H2B | 0.1711 | 0.1355 | 0.2341 | 0.022* | |
| C3 | 0.13263 (8) | 0.3171 (5) | 0.1363 (2) | 0.0166 (7) | |
| C4 | 0.25323 (8) | 0.4023 (5) | 0.1246 (2) | 0.0160 (7) | |
| C5 | 0.28417 (8) | 0.0835 (6) | 0.1177 (2) | 0.0167 (6) | |
| H5 | 0.2910 | −0.0704 | 0.1157 | 0.020* | |
| C6 | 0.30436 (8) | 0.2790 (5) | 0.1142 (2) | 0.0149 (6) | |
| C7 | 0.34193 (8) | 0.2930 (5) | 0.1098 (2) | 0.0148 (7) | |
| C8 | 0.35464 (9) | 0.4896 (5) | 0.0746 (2) | 0.0181 (7) | |
| H8 | 0.3389 | 0.6139 | 0.0527 | 0.022* | |
| C9 | 0.39034 (9) | 0.5024 (5) | 0.0718 (2) | 0.0192 (7) | |
| H9 | 0.3986 | 0.6340 | 0.0484 | 0.023* | |
| C10 | 0.41322 (8) | 0.3176 (6) | 0.1039 (2) | 0.0183 (7) | |
| C11 | 0.40183 (9) | 0.1192 (6) | 0.1396 (2) | 0.0206 (7) | |
| H11 | 0.4178 | −0.0038 | 0.1616 | 0.025* | |
| C12 | 0.36610 (8) | 0.1082 (6) | 0.1418 (2) | 0.0178 (7) | |
| H12 | 0.3580 | −0.0244 | 0.1649 | 0.021* | |
| C13 | 0.07777 (9) | 0.4766 (5) | 0.1117 (2) | 0.0176 (7) | |
| C14 | 0.04157 (9) | 0.5159 (6) | 0.1076 (2) | 0.0209 (7) | |
| H14 | 0.0292 | 0.6519 | 0.0834 | 0.025* | |
| C15 | 0.02526 (9) | 0.3370 (6) | 0.1424 (2) | 0.0219 (7) | |
| H15 | 0.0010 | 0.3519 | 0.1407 | 0.026* | |
| C16 | 0.04440 (8) | 0.1336 (6) | 0.1800 (3) | 0.0212 (7) | |
| H16 | 0.0326 | 0.0188 | 0.2036 | 0.025* | |
| C17 | 0.08036 (8) | 0.1001 (6) | 0.1828 (2) | 0.0178 (7) | |
| H17 | 0.0928 | −0.0352 | 0.2074 | 0.021* | |
| C18 | 0.09718 (8) | 0.2764 (5) | 0.1474 (2) | 0.0166 (7) | |
| O1 | 0.09977 (6) | 0.6281 (4) | 0.08271 (17) | 0.0222 (5) | |
| N1 | 0.28445 (7) | 0.4813 (4) | 0.11762 (19) | 0.0161 (6) | |
| N2 | 0.22129 (7) | 0.0628 (5) | 0.13533 (19) | 0.0171 (6) | |
| N3 | 0.25177 (7) | 0.1673 (4) | 0.12454 (19) | 0.0158 (6) | |
| N4 | 0.13496 (7) | 0.5207 (5) | 0.1006 (2) | 0.0208 (6) | |
| S1 | 0.21240 (2) | 0.51078 (13) | 0.13431 (6) | 0.0182 (2) | |
| Cl1 | 0.45843 (2) | 0.33439 (15) | 0.10073 (6) | 0.0267 (3) |
| C1 | 0.0141 (14) | 0.0126 (15) | 0.0175 (16) | 0.0005 (12) | 0.0032 (13) | 0.0015 (12) |
| C2 | 0.0170 (15) | 0.0154 (16) | 0.0248 (18) | 0.0016 (12) | 0.0095 (14) | 0.0034 (13) |
| C3 | 0.0197 (15) | 0.0141 (15) | 0.0155 (16) | −0.0028 (12) | 0.0049 (13) | −0.0002 (12) |
| C4 | 0.0202 (15) | 0.0121 (15) | 0.0152 (16) | 0.0008 (12) | 0.0047 (13) | −0.0006 (12) |
| C5 | 0.0152 (14) | 0.0138 (15) | 0.0214 (16) | 0.0032 (12) | 0.0062 (13) | 0.0002 (13) |
| C6 | 0.0131 (14) | 0.0162 (16) | 0.0153 (16) | −0.0011 (12) | 0.0042 (13) | 0.0011 (12) |
| C7 | 0.0137 (14) | 0.0156 (16) | 0.0159 (16) | −0.0034 (12) | 0.0054 (12) | −0.0023 (12) |
| C8 | 0.0206 (16) | 0.0157 (16) | 0.0191 (17) | 0.0021 (12) | 0.0078 (14) | 0.0006 (12) |
| C9 | 0.0252 (17) | 0.0161 (17) | 0.0176 (17) | −0.0052 (13) | 0.0086 (14) | −0.0021 (12) |
| C10 | 0.0142 (14) | 0.0231 (17) | 0.0179 (17) | −0.0048 (12) | 0.0051 (13) | −0.0056 (13) |
| C11 | 0.0231 (16) | 0.0177 (17) | 0.0220 (18) | 0.0049 (13) | 0.0084 (14) | −0.0019 (13) |
| C12 | 0.0193 (15) | 0.0169 (16) | 0.0178 (17) | 0.0012 (13) | 0.0067 (13) | 0.0014 (13) |
| C13 | 0.0190 (16) | 0.0158 (16) | 0.0204 (17) | −0.0004 (12) | 0.0096 (14) | 0.0009 (13) |
| C14 | 0.0194 (16) | 0.0200 (17) | 0.0220 (18) | 0.0035 (13) | 0.0042 (14) | 0.0000 (13) |
| C15 | 0.0177 (16) | 0.0283 (19) | 0.0209 (18) | −0.0017 (13) | 0.0077 (14) | −0.0013 (14) |
| C16 | 0.0149 (15) | 0.0216 (17) | 0.0276 (19) | −0.0029 (13) | 0.0075 (14) | 0.0010 (14) |
| C17 | 0.0172 (15) | 0.0163 (16) | 0.0202 (17) | 0.0005 (12) | 0.0060 (13) | 0.0023 (13) |
| C18 | 0.0136 (14) | 0.0178 (16) | 0.0183 (16) | 0.0011 (12) | 0.0049 (13) | −0.0003 (13) |
| O1 | 0.0200 (11) | 0.0167 (12) | 0.0325 (14) | 0.0044 (9) | 0.0120 (11) | 0.0055 (10) |
| N1 | 0.0114 (12) | 0.0167 (14) | 0.0206 (14) | 0.0006 (10) | 0.0054 (11) | −0.0008 (11) |
| N2 | 0.0127 (12) | 0.0178 (14) | 0.0211 (15) | −0.0055 (10) | 0.0059 (11) | 0.0001 (11) |
| N3 | 0.0174 (13) | 0.0115 (13) | 0.0189 (15) | −0.0012 (10) | 0.0059 (11) | 0.0013 (10) |
| N4 | 0.0147 (13) | 0.0244 (16) | 0.0251 (16) | 0.0015 (11) | 0.0087 (12) | 0.0010 (12) |
| S1 | 0.0184 (4) | 0.0124 (4) | 0.0257 (5) | −0.0008 (3) | 0.0096 (4) | −0.0007 (3) |
| Cl1 | 0.0177 (4) | 0.0329 (5) | 0.0318 (5) | −0.0021 (3) | 0.0110 (4) | −0.0057 (4) |
| C1—N2 | 1.297 (4) | C9—C10 | 1.371 (4) |
| C1—C2 | 1.508 (4) | C9—H9 | 0.9300 |
| C1—S1 | 1.756 (3) | C10—C11 | 1.387 (5) |
| C2—C3 | 1.490 (4) | C10—Cl1 | 1.755 (3) |
| C2—H2A | 0.9700 | C11—C12 | 1.384 (4) |
| C2—H2B | 0.9700 | C11—H11 | 0.9300 |
| C3—N4 | 1.304 (4) | C12—H12 | 0.9300 |
| C3—C18 | 1.440 (4) | C13—O1 | 1.374 (4) |
| C4—N1 | 1.316 (4) | C13—C14 | 1.392 (4) |
| C4—N3 | 1.358 (4) | C13—C18 | 1.389 (4) |
| C4—S1 | 1.736 (3) | C14—C15 | 1.387 (5) |
| C5—C6 | 1.380 (4) | C14—H14 | 0.9300 |
| C5—N3 | 1.369 (4) | C15—C16 | 1.406 (5) |
| C5—H5 | 0.9300 | C15—H15 | 0.9300 |
| C6—N1 | 1.406 (4) | C16—C17 | 1.383 (4) |
| C6—C7 | 1.468 (4) | C16—H16 | 0.9300 |
| C7—C12 | 1.398 (4) | C17—C18 | 1.392 (4) |
| C7—C8 | 1.398 (4) | C17—H17 | 0.9300 |
| C8—C9 | 1.387 (4) | O1—N4 | 1.436 (3) |
| C8—H8 | 0.9300 | N2—N3 | 1.370 (3) |
| N2—C1—C2 | 119.1 (3) | C12—C11—C10 | 118.5 (3) |
| N2—C1—S1 | 116.7 (2) | C12—C11—H11 | 120.7 |
| C2—C1—S1 | 124.0 (2) | C10—C11—H11 | 120.7 |
| C3—C2—C1 | 117.9 (3) | C11—C12—C7 | 121.1 (3) |
| C3—C2—H2A | 107.8 | C11—C12—H12 | 119.4 |
| C1—C2—H2A | 107.8 | C7—C12—H12 | 119.4 |
| C3—C2—H2B | 107.8 | O1—C13—C14 | 125.8 (3) |
| C1—C2—H2B | 107.8 | O1—C13—C18 | 109.8 (3) |
| H2A—C2—H2B | 107.2 | C14—C13—C18 | 124.4 (3) |
| N4—C3—C18 | 112.3 (3) | C13—C14—C15 | 115.0 (3) |
| N4—C3—C2 | 121.8 (3) | C13—C14—H14 | 122.5 |
| C18—C3—C2 | 125.9 (3) | C15—C14—H14 | 122.5 |
| N1—C4—N3 | 112.7 (3) | C14—C15—C16 | 121.9 (3) |
| N1—C4—S1 | 138.5 (3) | C14—C15—H15 | 119.1 |
| N3—C4—S1 | 108.8 (2) | C16—C15—H15 | 119.1 |
| C6—C5—N3 | 104.3 (3) | C17—C16—C15 | 121.6 (3) |
| C6—C5—H5 | 127.8 | C17—C16—H16 | 119.2 |
| N3—C5—H5 | 127.8 | C15—C16—H16 | 119.2 |
| C5—C6—N1 | 111.2 (3) | C16—C17—C18 | 117.5 (3) |
| C5—C6—C7 | 128.2 (3) | C16—C17—H17 | 121.3 |
| N1—C6—C7 | 120.6 (3) | C18—C17—H17 | 121.3 |
| C12—C7—C8 | 118.3 (3) | C17—C18—C13 | 119.7 (3) |
| C12—C7—C6 | 120.2 (3) | C17—C18—C3 | 136.7 (3) |
| C8—C7—C6 | 121.5 (3) | C13—C18—C3 | 103.7 (3) |
| C9—C8—C7 | 121.1 (3) | C13—O1—N4 | 107.6 (2) |
| C9—C8—H8 | 119.4 | C4—N1—C6 | 103.5 (2) |
| C7—C8—H8 | 119.4 | C1—N2—N3 | 108.1 (3) |
| C10—C9—C8 | 118.8 (3) | C4—N3—N2 | 118.5 (3) |
| C10—C9—H9 | 120.6 | C4—N3—C5 | 108.4 (3) |
| C8—C9—H9 | 120.6 | N2—N3—C5 | 133.0 (3) |
| C9—C10—C11 | 122.1 (3) | C3—N4—O1 | 106.6 (2) |
| C9—C10—Cl1 | 118.8 (2) | C4—S1—C1 | 87.82 (14) |
| C11—C10—Cl1 | 119.1 (2) | ||
| N2—C1—C2—C3 | −155.9 (3) | O1—C13—C18—C3 | −0.9 (3) |
| S1—C1—C2—C3 | 30.1 (4) | C14—C13—C18—C3 | 179.8 (3) |
| C1—C2—C3—N4 | −7.1 (5) | N4—C3—C18—C17 | −177.9 (4) |
| C1—C2—C3—C18 | 176.2 (3) | C2—C3—C18—C17 | −0.9 (6) |
| N3—C5—C6—N1 | −0.8 (3) | N4—C3—C18—C13 | 1.6 (4) |
| N3—C5—C6—C7 | 177.9 (3) | C2—C3—C18—C13 | 178.6 (3) |
| C5—C6—C7—C12 | −22.8 (5) | C14—C13—O1—N4 | 179.2 (3) |
| N1—C6—C7—C12 | 155.8 (3) | C18—C13—O1—N4 | 0.0 (3) |
| C5—C6—C7—C8 | 157.7 (3) | N3—C4—N1—C6 | −0.8 (3) |
| N1—C6—C7—C8 | −23.7 (4) | S1—C4—N1—C6 | 178.9 (3) |
| C12—C7—C8—C9 | −0.3 (5) | C5—C6—N1—C4 | 1.0 (3) |
| C6—C7—C8—C9 | 179.2 (3) | C7—C6—N1—C4 | −177.8 (3) |
| C7—C8—C9—C10 | 0.2 (5) | C2—C1—N2—N3 | −173.3 (3) |
| C8—C9—C10—C11 | −0.3 (5) | S1—C1—N2—N3 | 1.1 (3) |
| C8—C9—C10—Cl1 | −179.8 (2) | N1—C4—N3—N2 | 177.4 (3) |
| C9—C10—C11—C12 | 0.5 (5) | S1—C4—N3—N2 | −2.5 (3) |
| Cl1—C10—C11—C12 | 180.0 (2) | N1—C4—N3—C5 | 0.3 (4) |
| C10—C11—C12—C7 | −0.7 (5) | S1—C4—N3—C5 | −179.5 (2) |
| C8—C7—C12—C11 | 0.6 (5) | C1—N2—N3—C4 | 0.9 (4) |
| C6—C7—C12—C11 | −179.0 (3) | C1—N2—N3—C5 | 177.1 (3) |
| O1—C13—C14—C15 | −179.3 (3) | C6—C5—N3—C4 | 0.3 (3) |
| C18—C13—C14—C15 | −0.1 (5) | C6—C5—N3—N2 | −176.1 (3) |
| C13—C14—C15—C16 | 0.9 (5) | C18—C3—N4—O1 | −1.7 (4) |
| C14—C15—C16—C17 | −1.1 (5) | C2—C3—N4—O1 | −178.8 (3) |
| C15—C16—C17—C18 | 0.4 (5) | C13—O1—N4—C3 | 1.1 (3) |
| C16—C17—C18—C13 | 0.4 (5) | N1—C4—S1—C1 | −177.4 (4) |
| C16—C17—C18—C3 | 179.8 (4) | N3—C4—S1—C1 | 2.4 (2) |
| O1—C13—C18—C17 | 178.7 (3) | N2—C1—S1—C4 | −2.1 (3) |
| C14—C13—C18—C17 | −0.6 (5) | C2—C1—S1—C4 | 172.1 (3) |
| Cg1 and Cg2 are the centroids of the C7–C12 and C13–C18 rings, respectively. |
| H··· | ||||
| C9—H9···O1i | 0.93 | 2.39 | 3.232 (4) | 150 |
| C2—H2B···N1ii | 0.97 | 2.49 | 3.352 (4) | 148 |
| C5—H5···N1iii | 0.93 | 2.60 | 3.478 (4) | 157 |
| C17—H17···Cg1iv | 0.93 | 2.78 | 3.470 (4) | 131 |
| C11—H11···Cg2iv | 0.93 | 2.93 | 3.548 (4) | 126 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the C7–C12 and C13–C18 rings, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9⋯O1i | 0.93 | 2.39 | 3.232 (4) | 150 |
| C2—H2 | 0.97 | 2.49 | 3.352 (4) | 148 |
| C5—H5⋯N1iii | 0.93 | 2.60 | 3.478 (4) | 157 |
| C17—H17⋯ | 0.93 | 2.78 | 3.470 (4) | 131 |
| C11—H11⋯ | 0.93 | 2.93 | 3.548 (4) | 126 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .