Literature DB >> 21522301

trans-Dichloridobis(propane-1,3-diamine-κN,N')chromium(III) perchlorate.

Jong-Ha Choi, William Clegg.   

Abstract

In the title compound, [CrCl(2)(C(3)H(10)N(2))(2)]ClO(4), the Cr(III) atom is coordinated equatorially by four N atoms of two propane-1,3-diamine (tn) ligands and axially by two mutually trans Cl atoms, thus displaying a slightly distorted octa-hedral geometry with no crystallographically imposed symmetry. The two six-membered chair chelate rings in the complex cation are in an anti conformation with respect to each other. The Cr-N bond lengths range from 2.0831 (18) to 2.0917 (19) Å, and the Cr-Cl bond lengths are 2.3148 (6) and 2.3135 (6) Å. The perchlorate anions have slightly distorted tetra-hedral geometries. Weak inter-molecular hydrogen bonds involving the tn ligand NH groups as donors, and chloride ligands and anion O atoms as acceptors are observed.

Entities:  

Year:  2011        PMID: 21522301      PMCID: PMC3052098          DOI: 10.1107/S1600536811006349

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Couldwell & House (1972 ▶); House (1970 ▶). For related structures, see: Choi et al. (2002 ▶, 2007 ▶, 2008 ▶, 2010 ▶); Vaughn & Rogers (1985 ▶); Kou et al. (2001 ▶). For tn ligand geometry, see: Vaughn (1981 ▶). For the standard Cambridge Structural Database description, see: Allen (2002 ▶).

Experimental

Crystal data

[CrCl2(C3H10N2)2]ClO4 M = 370.61 Monoclinic, a = 6.4306 (5) Å b = 17.2588 (15) Å c = 13.0235 (11) Å β = 92.840 (4)° V = 1443.6 (2) Å3 Z = 4 Mo Kα radiation μ = 1.36 mm−1 T = 173 K 0.16 × 0.08 × 0.05 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (TWINABS; Sheldrick, 2008a ▶) T min = 0.815, T max = 0.930 28308 measured reflections 6269 independent reflections 5585 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.075 S = 1.07 6269 reflections 245 parameters All H-atom parameters refined Δρmax = 0.36 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXTL; molecular graphics: DIAMOND (Brandenburg, 2010 ▶); software used to prepare material for publication: SHELXTL and local programs. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811006349/nk2086sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811006349/nk2086Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CrCl2(C3H10N2)2]ClO4F(000) = 764
Mr = 370.61Dx = 1.705 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6530 reflections
a = 6.4306 (5) Åθ = 2.8–28.3°
b = 17.2588 (15) ŵ = 1.36 mm1
c = 13.0235 (11) ÅT = 173 K
β = 92.840 (4)°Block, green
V = 1443.6 (2) Å30.16 × 0.08 × 0.05 mm
Z = 4
Bruker APEXII CCD diffractometer6269 independent reflections
Radiation source: sealed tube5585 reflections with I > 2σ(I)
graphiteRint = 0.039
Thin–slice ω scansθmax = 28.4°, θmin = 2.0°
Absorption correction: multi-scan (TWINABS; Sheldrick, 2008a)h = −8→8
Tmin = 0.815, Tmax = 0.930k = 0→23
28308 measured reflectionsl = 0→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028All H-atom parameters refined
wR(F2) = 0.075w = 1/[σ2(Fo2) + (0.0391P)2 + 1.9009P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
6269 reflectionsΔρmax = 0.36 e Å3
245 parametersΔρmin = −0.32 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008a), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0011 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cr0.49360 (5)0.396455 (18)0.29650 (2)0.01236 (9)
Cl10.24916 (7)0.41493 (3)0.41882 (4)0.01906 (12)
Cl20.74177 (7)0.37755 (3)0.17627 (4)0.01921 (12)
N10.7262 (3)0.42985 (10)0.40534 (14)0.0149 (3)
H1A0.840 (4)0.4296 (16)0.375 (2)0.026 (7)*
H1B0.707 (4)0.4791 (15)0.4214 (19)0.015 (6)*
N20.5301 (3)0.28012 (11)0.33866 (15)0.0177 (4)
H2A0.619 (5)0.2656 (17)0.301 (2)0.028 (8)*
H2B0.417 (5)0.2552 (18)0.321 (2)0.039 (8)*
N30.2572 (3)0.36594 (12)0.18892 (14)0.0182 (4)
H3A0.258 (4)0.3159 (17)0.182 (2)0.027 (7)*
H3B0.138 (5)0.3757 (16)0.219 (2)0.030 (8)*
N40.4523 (3)0.51159 (11)0.25055 (15)0.0194 (4)
H4A0.556 (4)0.5348 (16)0.271 (2)0.024 (7)*
H4B0.356 (5)0.5272 (16)0.284 (2)0.029 (8)*
C10.7561 (3)0.38579 (13)0.50303 (17)0.0190 (4)
H1C0.872 (4)0.4054 (15)0.543 (2)0.022 (7)*
H1D0.634 (4)0.3944 (13)0.5441 (19)0.011 (6)*
C20.7850 (4)0.29977 (13)0.48554 (19)0.0236 (5)
H2C0.894 (4)0.2925 (15)0.439 (2)0.022 (7)*
H2D0.821 (4)0.2755 (17)0.550 (2)0.034 (8)*
C30.5888 (4)0.25891 (13)0.44656 (18)0.0222 (5)
H3C0.605 (4)0.2040 (16)0.450 (2)0.024 (7)*
H3D0.476 (4)0.2728 (15)0.490 (2)0.023 (7)*
C40.2446 (4)0.40246 (14)0.08533 (18)0.0232 (5)
H4C0.366 (4)0.3889 (15)0.051 (2)0.022 (7)*
H4D0.121 (4)0.3793 (15)0.045 (2)0.021 (6)*
C50.2255 (4)0.48944 (15)0.09247 (19)0.0244 (5)
H5C0.203 (4)0.5077 (16)0.021 (2)0.032 (8)*
H5D0.104 (4)0.5017 (16)0.129 (2)0.029 (7)*
C60.4160 (4)0.52997 (14)0.13932 (19)0.0242 (5)
H6C0.542 (4)0.5136 (15)0.106 (2)0.021 (6)*
H6D0.403 (4)0.5848 (17)0.135 (2)0.029 (7)*
Cl30.07592 (8)0.14746 (3)0.25004 (4)0.01984 (12)
O10.1011 (3)0.06757 (10)0.22292 (16)0.0363 (4)
O20.1833 (3)0.19442 (11)0.17838 (16)0.0384 (5)
O3−0.1425 (3)0.16517 (11)0.24445 (15)0.0358 (4)
O40.1632 (3)0.16154 (14)0.35117 (15)0.0475 (5)
U11U22U33U12U13U23
Cr0.00998 (15)0.01357 (16)0.01352 (17)−0.00015 (11)0.00047 (11)−0.00070 (12)
Cl10.0142 (2)0.0238 (3)0.0196 (3)0.00007 (18)0.00468 (18)−0.00218 (19)
Cl20.0131 (2)0.0257 (3)0.0190 (3)0.00135 (18)0.00347 (18)−0.00246 (19)
N10.0135 (8)0.0154 (9)0.0160 (9)−0.0014 (6)0.0014 (6)−0.0011 (7)
N20.0171 (8)0.0166 (9)0.0192 (9)−0.0015 (7)−0.0009 (7)−0.0017 (7)
N30.0133 (8)0.0238 (10)0.0175 (9)−0.0010 (7)−0.0003 (7)−0.0028 (7)
N40.0197 (9)0.0179 (9)0.0206 (10)0.0006 (7)0.0006 (8)0.0014 (7)
C10.0222 (10)0.0194 (10)0.0150 (10)−0.0019 (8)−0.0024 (8)−0.0007 (8)
C20.0281 (12)0.0194 (11)0.0226 (12)0.0020 (9)−0.0065 (10)0.0011 (9)
C30.0310 (12)0.0155 (10)0.0201 (11)−0.0035 (9)−0.0004 (9)0.0030 (8)
C40.0191 (10)0.0338 (13)0.0164 (11)0.0023 (9)−0.0017 (8)−0.0017 (9)
C50.0210 (11)0.0329 (13)0.0193 (11)0.0081 (9)0.0005 (9)0.0048 (9)
C60.0269 (11)0.0243 (12)0.0216 (11)0.0040 (9)0.0031 (9)0.0080 (9)
Cl30.0206 (2)0.0175 (2)0.0210 (3)−0.00116 (19)−0.00290 (19)−0.00153 (19)
O10.0380 (10)0.0179 (8)0.0530 (13)0.0042 (7)0.0012 (9)−0.0030 (8)
O20.0452 (11)0.0343 (10)0.0364 (11)−0.0138 (9)0.0092 (9)0.0050 (8)
O30.0246 (9)0.0394 (10)0.0434 (12)0.0087 (8)0.0019 (8)−0.0052 (9)
O40.0523 (13)0.0653 (15)0.0235 (10)−0.0131 (11)−0.0121 (9)−0.0053 (10)
Cr—Cl12.3148 (6)C1—H1D0.98 (2)
Cr—Cl22.3135 (6)C1—C21.515 (3)
Cr—N12.0903 (18)C2—H2C0.95 (3)
Cr—N22.0917 (19)C2—H2D0.96 (3)
Cr—N32.0831 (18)C2—C31.511 (3)
Cr—N42.0884 (19)C3—H3C0.95 (3)
N1—H1A0.85 (3)C3—H3D0.97 (3)
N1—H1B0.89 (3)C4—H4C0.95 (3)
N1—C11.486 (3)C4—H4D1.02 (3)
N2—H2A0.81 (3)C4—C51.510 (3)
N2—H2B0.86 (3)C5—H5C0.99 (3)
N2—C31.483 (3)C5—H5D0.95 (3)
N3—H3A0.87 (3)C5—C61.513 (3)
N3—H3B0.89 (3)C6—H6C0.98 (3)
N3—C41.488 (3)C6—H6D0.95 (3)
N4—H4A0.81 (3)Cl3—O11.4346 (18)
N4—H4B0.82 (3)Cl3—O21.4380 (19)
N4—C61.490 (3)Cl3—O31.4360 (18)
C1—H1C0.95 (3)Cl3—O41.4268 (19)
Cl1—Cr—Cl2179.11 (2)N1—C1—C2112.60 (19)
Cl1—Cr—N189.02 (5)H1C—C1—H1D106 (2)
Cl1—Cr—N291.31 (6)H1C—C1—C2109.5 (15)
Cl1—Cr—N390.00 (6)H1D—C1—C2109.7 (13)
Cl1—Cr—N489.14 (6)C1—C2—H2C108.8 (16)
Cl2—Cr—N190.19 (5)C1—C2—H2D108.8 (18)
Cl2—Cr—N288.28 (6)C1—C2—C3113.6 (2)
Cl2—Cr—N390.80 (6)H2C—C2—H2D110 (2)
Cl2—Cr—N491.29 (6)H2C—C2—C3110.8 (16)
N1—Cr—N291.11 (7)H2D—C2—C3104.7 (17)
N1—Cr—N3178.42 (8)N2—C3—C2111.85 (19)
N1—Cr—N490.49 (7)N2—C3—H3C108.4 (16)
N2—Cr—N390.15 (8)N2—C3—H3D108.9 (16)
N2—Cr—N4178.34 (8)C2—C3—H3C111.0 (16)
N3—Cr—N488.26 (8)C2—C3—H3D109.1 (16)
Cr—N1—H1A106.5 (19)H3C—C3—H3D107 (2)
Cr—N1—H1B108.7 (16)N3—C4—H4C108.4 (16)
Cr—N1—C1119.81 (13)N3—C4—H4D108.1 (15)
H1A—N1—H1B104 (2)N3—C4—C5111.49 (19)
H1A—N1—C1108.7 (19)H4C—C4—H4D107 (2)
H1B—N1—C1107.6 (16)H4C—C4—C5110.2 (16)
Cr—N2—H2A102 (2)H4D—C4—C5111.1 (14)
Cr—N2—H2B109 (2)C4—C5—H5C105.6 (16)
Cr—N2—C3120.38 (14)C4—C5—H5D108.8 (17)
H2A—N2—H2B107 (3)C4—C5—C6114.71 (19)
H2A—N2—C3110 (2)H5C—C5—H5D108 (2)
H2B—N2—C3108 (2)H5C—C5—C6108.0 (16)
Cr—N3—H3A108.3 (19)H5D—C5—C6111.2 (17)
Cr—N3—H3B105.8 (19)N4—C6—C5112.24 (19)
Cr—N3—C4120.53 (14)N4—C6—H6C106.3 (15)
H3A—N3—H3B104 (3)N4—C6—H6D106.0 (17)
H3A—N3—C4109.2 (19)C5—C6—H6C110.9 (15)
H3B—N3—C4107.9 (19)C5—C6—H6D111.8 (17)
Cr—N4—H4A107 (2)H6C—C6—H6D109 (2)
Cr—N4—H4B104 (2)O1—Cl3—O2108.55 (12)
Cr—N4—C6119.53 (15)O1—Cl3—O3108.32 (11)
H4A—N4—H4B107 (3)O1—Cl3—O4110.29 (13)
H4A—N4—C6108 (2)O2—Cl3—O3110.30 (12)
H4B—N4—C6111 (2)O2—Cl3—O4108.88 (13)
N1—C1—H1C110.3 (16)O3—Cl3—O4110.48 (13)
N1—C1—H1D108.4 (14)
Cl1—Cr—N1—C159.00 (15)Cl1—Cr—N4—C6−130.76 (17)
Cl2—Cr—N1—C1−120.57 (15)Cl2—Cr—N4—C650.02 (17)
N2—Cr—N1—C1−32.28 (16)N1—Cr—N4—C6140.22 (17)
N4—Cr—N1—C1148.14 (16)N3—Cr—N4—C6−40.74 (17)
Cl1—Cr—N2—C3−56.16 (16)Cr—N1—C1—C253.7 (2)
Cl2—Cr—N2—C3123.04 (16)N1—C1—C2—C3−71.2 (3)
N1—Cr—N2—C332.88 (17)Cr—N2—C3—C2−54.3 (2)
N3—Cr—N2—C3−146.17 (17)C1—C2—C3—N271.1 (3)
Cl1—Cr—N3—C4130.33 (16)Cr—N3—C4—C5−58.4 (2)
Cl2—Cr—N3—C4−50.08 (16)N3—C4—C5—C667.0 (3)
N2—Cr—N3—C4−138.36 (17)Cr—N4—C6—C558.4 (2)
N4—Cr—N3—C441.19 (17)C4—C5—C6—N4−67.7 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Cl1i0.85 (3)2.68 (3)3.3684 (19)139 (2)
N1—H1B···Cl1ii0.89 (3)2.77 (3)3.5229 (19)143 (2)
N2—H2A···O3i0.81 (3)2.45 (3)3.182 (3)151 (3)
N2—H2A···Cl20.81 (3)2.67 (3)3.072 (2)112 (2)
N2—H2B···O40.86 (3)2.35 (3)3.134 (3)151 (3)
N2—H2B···O20.86 (3)2.56 (3)3.326 (3)149 (3)
N3—H3A···O20.87 (3)2.15 (3)3.000 (3)166 (3)
N3—H3B···Cl2iii0.89 (3)2.58 (3)3.3168 (19)140 (2)
N4—H4A···O1iv0.81 (3)2.28 (3)3.033 (3)156 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯Cl1i0.85 (3)2.68 (3)3.3684 (19)139 (2)
N1—H1B⋯Cl1ii0.89 (3)2.77 (3)3.5229 (19)143 (2)
N2—H2A⋯O3i0.81 (3)2.45 (3)3.182 (3)151 (3)
N2—H2A⋯Cl20.81 (3)2.67 (3)3.072 (2)112 (2)
N2—H2B⋯O40.86 (3)2.35 (3)3.134 (3)151 (3)
N2—H2B⋯O20.86 (3)2.56 (3)3.326 (3)149 (3)
N3—H3A⋯O20.87 (3)2.15 (3)3.000 (3)166 (3)
N3—H3B⋯Cl2iii0.89 (3)2.58 (3)3.3168 (19)140 (2)
N4—H4A⋯O1iv0.81 (3)2.28 (3)3.033 (3)156 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Bis[trans-dibromo(2,2-dimethylpropane-1,3-diamine-kappa2N,N')chromium(III)] dibromide hydrogen perchlorate hexahydrate.

Authors:  Jong-Ha Choi; Takayoshi Suzuki; Sumio Kaizaki
Journal:  Acta Crystallogr C       Date:  2002-10-22       Impact factor: 1.172

4.  Structural and spectroscopic properties of trans-dichlorobis(2,2-dimethyl-1,3-diaminopropane)chromium(III) chloride.

Authors:  Jong-Ha Choi; William Clegg; Gary S Nichol; Sang Hak Lee; Yu Chul Park; Mohammad Hossein Habibi
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2007-01-09       Impact factor: 4.098

5.  trans-Dichloridobis(2,2-dimethyl-prop-ane-1,3-diamine-κN,N')chromium(III) perchlorate.

Authors:  Jong-Ha Choi; Sang Hak Lee; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-18
  5 in total
  2 in total

1.  Bis[trans-dichloridobis(propane-1,3-diamine-κ(2)N,N')chromium(III)] tetra-chloridozincate determined using synchrotron radiation.

Authors:  Dohyun Moon; Md Abdus Subhan; Jong-Ha Choi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-26

2.  Crystal structure of bis-[trans-di-chlorido-bis(propane-1,3-di-amine-κ2N,N')chromium(III)] dichromate from synchrotron data.

Authors:  Dohyun Moon; Keon Sang Ryoo; Jong-Ha Choi
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2016-08-12
  2 in total

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