| Literature DB >> 21522253 |
Grant A Broker, Edward R T Tiekink.
Abstract
The complete mol-ecule of the title compound, [Cd(C(6)H(12)NOS(2))(2)(C(12)H(10)N(4))(2)], is generated by crystallographic inversion symmetry. The distorted octa-hedral trans-N(2)S(4) donor set for the Cd(2+) ion is defined by two symmetrically S,S'-chelating dithio-carbamate anions and two pyridine N atoms derived from two monodentate 4-pyridine-aldazine (or 4-{[(pyridin-4-yl-methyl-idene)hydrazinyl-idene}meth-yl]pyridine) mol-ecules [dihedral angle between the aromatic rings = 17.33 (8)°]. In the crystal, mol-ecules are connected into a supra-molecular chain via O-H⋯N hydrogen bonds involving the 4-pyridine-aldazine N atoms not involved in coordination to cadmium. Weak C-H⋯O and C-H⋯N links consolidate the packing.Entities:
Year: 2011 PMID: 21522253 PMCID: PMC3052135 DOI: 10.1107/S1600536811004508
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C6H12NOS2)2(C12H10N4)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3485 reflections | |
| θ = 2.4–30.3° | |
| µ = 0.80 mm−1 | |
| α = 79.59 (3)° | |
| β = 88.06 (3)° | Plate, yellow |
| γ = 78.23 (2)° | 0.25 × 0.16 × 0.04 mm |
| Rigaku AFC12K/SATURN724 CCD diffractometer | 4150 independent reflections |
| Radiation source: fine-focus sealed tube | 4009 reflections with |
| graphite | |
| ω scans | θmax = 26.5°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 10677 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4150 reflections | (Δ/σ)max < 0.001 |
| 245 parameters | Δρmax = 0.40 e Å−3 |
| 1 restraint | Δρmin = −0.40 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cd | 0.5000 | 0.5000 | 0.5000 | 0.01706 (6) | |
| S1 | 0.67567 (5) | 0.26992 (4) | 0.55937 (3) | 0.01562 (9) | |
| S2 | 0.48740 (5) | 0.36286 (4) | 0.32801 (4) | 0.01587 (9) | |
| O1 | 0.88422 (15) | 0.05660 (12) | 0.17754 (11) | 0.0223 (3) | |
| H1o | 0.954 (2) | 0.094 (2) | 0.1432 (19) | 0.033* | |
| N1 | 0.67484 (15) | 0.13324 (12) | 0.38469 (11) | 0.0120 (3) | |
| N2 | 0.26143 (17) | 0.42763 (14) | 0.61140 (13) | 0.0192 (3) | |
| N3 | −0.25800 (17) | 0.36129 (14) | 0.82625 (13) | 0.0194 (3) | |
| N4 | −0.37162 (17) | 0.28924 (14) | 0.87834 (12) | 0.0191 (3) | |
| N5 | −0.88990 (18) | 0.19365 (15) | 1.06431 (14) | 0.0245 (3) | |
| C1 | 0.61822 (18) | 0.24449 (15) | 0.41986 (14) | 0.0135 (3) | |
| C2 | 0.62455 (19) | 0.10536 (15) | 0.26935 (14) | 0.0156 (3) | |
| H2A | 0.5139 | 0.1526 | 0.2501 | 0.019* | |
| H2B | 0.6239 | 0.0138 | 0.2796 | 0.019* | |
| C3 | 0.7325 (2) | 0.14035 (16) | 0.16368 (15) | 0.0196 (3) | |
| H3A | 0.6824 | 0.1356 | 0.0866 | 0.024* | |
| H3B | 0.7465 | 0.2285 | 0.1601 | 0.024* | |
| C4 | 0.79259 (19) | 0.03218 (15) | 0.45840 (14) | 0.0150 (3) | |
| H4A | 0.8604 | 0.0717 | 0.5037 | 0.018* | |
| H4B | 0.8630 | −0.0158 | 0.4033 | 0.018* | |
| C5 | 0.7154 (2) | −0.05962 (16) | 0.54826 (15) | 0.0185 (3) | |
| H5A | 0.6421 | −0.0957 | 0.5043 | 0.022* | |
| H5B | 0.6517 | −0.0137 | 0.6080 | 0.022* | |
| C6 | 0.8430 (2) | −0.16666 (17) | 0.61485 (17) | 0.0239 (4) | |
| H6A | 0.7911 | −0.2254 | 0.6715 | 0.036* | |
| H6B | 0.9137 | −0.1311 | 0.6602 | 0.036* | |
| H6C | 0.9059 | −0.2121 | 0.5557 | 0.036* | |
| C7 | 0.1257 (2) | 0.50814 (17) | 0.63223 (18) | 0.0254 (4) | |
| H7 | 0.1197 | 0.5963 | 0.6049 | 0.031* | |
| C8 | −0.0057 (2) | 0.46933 (17) | 0.69130 (17) | 0.0238 (4) | |
| H8 | −0.0989 | 0.5297 | 0.7041 | 0.029* | |
| C9 | 0.0008 (2) | 0.34018 (16) | 0.73174 (14) | 0.0169 (3) | |
| C10 | 0.1403 (2) | 0.25663 (16) | 0.70970 (16) | 0.0203 (3) | |
| H10 | 0.1493 | 0.1679 | 0.7352 | 0.024* | |
| C11 | 0.2661 (2) | 0.30418 (16) | 0.65018 (16) | 0.0205 (3) | |
| H11 | 0.3608 | 0.2458 | 0.6362 | 0.025* | |
| C12 | −0.1326 (2) | 0.28869 (16) | 0.79403 (14) | 0.0177 (3) | |
| H12 | −0.1255 | 0.1995 | 0.8107 | 0.021* | |
| C13 | −0.5012 (2) | 0.35972 (17) | 0.90688 (15) | 0.0200 (3) | |
| H13 | −0.5119 | 0.4492 | 0.8929 | 0.024* | |
| C14 | −0.6338 (2) | 0.30118 (17) | 0.96168 (14) | 0.0188 (3) | |
| C15 | −0.7640 (2) | 0.37321 (18) | 1.01209 (17) | 0.0248 (4) | |
| H15 | −0.7681 | 0.4604 | 1.0127 | 0.030* | |
| C16 | −0.8877 (2) | 0.31554 (19) | 1.06143 (17) | 0.0269 (4) | |
| H16 | −0.9762 | 0.3659 | 1.0952 | 0.032* | |
| C17 | −0.7628 (2) | 0.12403 (18) | 1.01712 (16) | 0.0247 (4) | |
| H17 | −0.7612 | 0.0367 | 1.0192 | 0.030* | |
| C18 | −0.6341 (2) | 0.17338 (18) | 0.96559 (16) | 0.0228 (4) | |
| H18 | −0.5468 | 0.1206 | 0.9332 | 0.027* |
| Cd | 0.01757 (10) | 0.01303 (10) | 0.02083 (10) | −0.00255 (7) | 0.00354 (7) | −0.00493 (7) |
| S1 | 0.0170 (2) | 0.01481 (19) | 0.01487 (19) | −0.00153 (15) | −0.00065 (15) | −0.00389 (15) |
| S2 | 0.0170 (2) | 0.01234 (19) | 0.0169 (2) | −0.00014 (15) | −0.00203 (15) | −0.00179 (15) |
| O1 | 0.0183 (6) | 0.0224 (6) | 0.0251 (6) | −0.0043 (5) | 0.0080 (5) | −0.0026 (5) |
| N1 | 0.0114 (6) | 0.0119 (6) | 0.0122 (6) | −0.0014 (5) | −0.0004 (5) | −0.0016 (5) |
| N2 | 0.0185 (7) | 0.0181 (7) | 0.0218 (7) | −0.0050 (6) | 0.0034 (6) | −0.0048 (6) |
| N3 | 0.0178 (7) | 0.0218 (7) | 0.0184 (7) | −0.0064 (6) | 0.0024 (5) | −0.0007 (6) |
| N4 | 0.0188 (7) | 0.0228 (7) | 0.0161 (7) | −0.0080 (6) | 0.0024 (5) | −0.0003 (6) |
| N5 | 0.0222 (8) | 0.0305 (9) | 0.0219 (8) | −0.0094 (7) | 0.0047 (6) | −0.0035 (6) |
| C1 | 0.0114 (7) | 0.0144 (8) | 0.0147 (7) | −0.0042 (6) | 0.0032 (6) | −0.0014 (6) |
| C2 | 0.0165 (8) | 0.0145 (8) | 0.0158 (8) | −0.0018 (6) | 0.0002 (6) | −0.0037 (6) |
| C3 | 0.0222 (9) | 0.0195 (8) | 0.0156 (8) | −0.0012 (7) | 0.0027 (6) | −0.0030 (6) |
| C4 | 0.0127 (7) | 0.0138 (8) | 0.0169 (8) | 0.0004 (6) | −0.0007 (6) | −0.0020 (6) |
| C5 | 0.0167 (8) | 0.0168 (8) | 0.0210 (8) | −0.0043 (7) | 0.0009 (6) | −0.0003 (6) |
| C6 | 0.0224 (9) | 0.0202 (9) | 0.0266 (9) | −0.0051 (7) | −0.0034 (7) | 0.0044 (7) |
| C7 | 0.0230 (9) | 0.0162 (8) | 0.0348 (10) | −0.0033 (7) | 0.0087 (8) | −0.0008 (7) |
| C8 | 0.0174 (9) | 0.0198 (9) | 0.0320 (10) | −0.0012 (7) | 0.0055 (7) | −0.0023 (7) |
| C9 | 0.0168 (8) | 0.0207 (8) | 0.0146 (8) | −0.0062 (7) | 0.0003 (6) | −0.0039 (6) |
| C10 | 0.0217 (9) | 0.0158 (8) | 0.0245 (9) | −0.0048 (7) | 0.0021 (7) | −0.0055 (7) |
| C11 | 0.0193 (8) | 0.0175 (8) | 0.0259 (9) | −0.0031 (7) | 0.0036 (7) | −0.0083 (7) |
| C12 | 0.0181 (8) | 0.0198 (8) | 0.0153 (8) | −0.0055 (7) | −0.0024 (6) | −0.0015 (6) |
| C13 | 0.0198 (9) | 0.0213 (9) | 0.0178 (8) | −0.0049 (7) | 0.0006 (6) | 0.0003 (7) |
| C14 | 0.0171 (8) | 0.0241 (9) | 0.0146 (8) | −0.0054 (7) | 0.0000 (6) | −0.0003 (6) |
| C15 | 0.0238 (9) | 0.0215 (9) | 0.0283 (9) | −0.0043 (7) | 0.0040 (7) | −0.0039 (7) |
| C16 | 0.0206 (9) | 0.0304 (10) | 0.0290 (10) | −0.0037 (8) | 0.0076 (7) | −0.0062 (8) |
| C17 | 0.0255 (9) | 0.0246 (9) | 0.0260 (9) | −0.0096 (8) | 0.0052 (7) | −0.0056 (7) |
| C18 | 0.0216 (9) | 0.0248 (9) | 0.0229 (9) | −0.0054 (7) | 0.0045 (7) | −0.0067 (7) |
| Cd—S1 | 2.6379 (10) | C4—H4B | 0.9900 |
| Cd—S2 | 2.6626 (10) | C5—C6 | 1.527 (2) |
| Cd—N2 | 2.5403 (17) | C5—H5A | 0.9900 |
| Cd—S1i | 2.6379 (10) | C5—H5B | 0.9900 |
| Cd—S2i | 2.6626 (10) | C6—H6A | 0.9800 |
| Cd—N2i | 2.5403 (17) | C6—H6B | 0.9800 |
| S1—C1 | 1.7369 (17) | C6—H6C | 0.9800 |
| S2—C1 | 1.7286 (18) | C7—C8 | 1.385 (2) |
| O1—C3 | 1.421 (2) | C7—H7 | 0.9500 |
| O1—H1o | 0.835 (10) | C8—C9 | 1.395 (2) |
| N1—C1 | 1.339 (2) | C8—H8 | 0.9500 |
| N1—C2 | 1.475 (2) | C9—C10 | 1.390 (2) |
| N1—C4 | 1.479 (2) | C9—C12 | 1.471 (2) |
| N2—C11 | 1.336 (2) | C10—C11 | 1.386 (2) |
| N2—C7 | 1.347 (2) | C10—H10 | 0.9500 |
| N3—C12 | 1.280 (2) | C11—H11 | 0.9500 |
| N3—N4 | 1.418 (2) | C12—H12 | 0.9500 |
| N4—C13 | 1.279 (2) | C13—C14 | 1.475 (2) |
| N5—C16 | 1.333 (3) | C13—H13 | 0.9500 |
| N5—C17 | 1.344 (2) | C14—C15 | 1.391 (2) |
| C2—C3 | 1.516 (2) | C14—C18 | 1.393 (3) |
| C2—H2A | 0.9900 | C15—C16 | 1.388 (3) |
| C2—H2B | 0.9900 | C15—H15 | 0.9500 |
| C3—H3A | 0.9900 | C16—H16 | 0.9500 |
| C3—H3B | 0.9900 | C17—C18 | 1.385 (2) |
| C4—C5 | 1.521 (2) | C17—H17 | 0.9500 |
| C4—H4A | 0.9900 | C18—H18 | 0.9500 |
| N2i—Cd—N2 | 180 | C4—C5—C6 | 110.58 (14) |
| N2i—Cd—S1 | 89.42 (4) | C4—C5—H5A | 109.5 |
| N2—Cd—S1 | 90.58 (4) | C6—C5—H5A | 109.5 |
| N2i—Cd—S1i | 90.58 (4) | C4—C5—H5B | 109.5 |
| N2—Cd—S1i | 89.42 (4) | C6—C5—H5B | 109.5 |
| S1—Cd—S1i | 180 | H5A—C5—H5B | 108.1 |
| N2i—Cd—S2 | 87.62 (4) | C5—C6—H6A | 109.5 |
| N2—Cd—S2 | 92.38 (4) | C5—C6—H6B | 109.5 |
| S1—Cd—S2 | 68.83 (3) | H6A—C6—H6B | 109.5 |
| S1i—Cd—S2 | 111.17 (3) | C5—C6—H6C | 109.5 |
| N2i—Cd—S2i | 92.38 (4) | H6A—C6—H6C | 109.5 |
| N2—Cd—S2i | 87.62 (4) | H6B—C6—H6C | 109.5 |
| S1—Cd—S2i | 111.17 (3) | N2—C7—C8 | 123.52 (17) |
| S1i—Cd—S2i | 68.83 (3) | N2—C7—H7 | 118.2 |
| S2—Cd—S2i | 180 | C8—C7—H7 | 118.2 |
| C1—S1—Cd | 86.05 (6) | C7—C8—C9 | 119.02 (16) |
| C1—S2—Cd | 85.43 (6) | C7—C8—H8 | 120.5 |
| C3—O1—H1o | 109.5 (16) | C9—C8—H8 | 120.5 |
| C1—N1—C2 | 121.74 (13) | C10—C9—C8 | 117.67 (15) |
| C1—N1—C4 | 121.96 (13) | C10—C9—C12 | 118.88 (15) |
| C2—N1—C4 | 116.29 (13) | C8—C9—C12 | 123.44 (16) |
| C11—N2—C7 | 116.95 (15) | C11—C10—C9 | 119.30 (16) |
| C11—N2—Cd | 119.88 (11) | C11—C10—H10 | 120.3 |
| C7—N2—Cd | 123.16 (11) | C9—C10—H10 | 120.3 |
| C12—N3—N4 | 110.47 (14) | N2—C11—C10 | 123.54 (16) |
| C13—N4—N3 | 111.93 (14) | N2—C11—H11 | 118.2 |
| C16—N5—C17 | 116.98 (16) | C10—C11—H11 | 118.2 |
| N1—C1—S2 | 120.59 (12) | N3—C12—C9 | 121.48 (16) |
| N1—C1—S1 | 119.77 (12) | N3—C12—H12 | 119.3 |
| S2—C1—S1 | 119.64 (10) | C9—C12—H12 | 119.3 |
| N1—C2—C3 | 113.01 (13) | N4—C13—C14 | 119.59 (16) |
| N1—C2—H2A | 109.0 | N4—C13—H13 | 120.2 |
| C3—C2—H2A | 109.0 | C14—C13—H13 | 120.2 |
| N1—C2—H2B | 109.0 | C15—C14—C18 | 117.63 (16) |
| C3—C2—H2B | 109.0 | C15—C14—C13 | 120.38 (16) |
| H2A—C2—H2B | 107.8 | C18—C14—C13 | 121.99 (16) |
| O1—C3—C2 | 110.27 (14) | C16—C15—C14 | 118.89 (17) |
| O1—C3—H3A | 109.6 | C16—C15—H15 | 120.6 |
| C2—C3—H3A | 109.6 | C14—C15—H15 | 120.6 |
| O1—C3—H3B | 109.6 | N5—C16—C15 | 123.90 (17) |
| C2—C3—H3B | 109.6 | N5—C16—H16 | 118.0 |
| H3A—C3—H3B | 108.1 | C15—C16—H16 | 118.0 |
| N1—C4—C5 | 113.22 (13) | N5—C17—C18 | 123.21 (17) |
| N1—C4—H4A | 108.9 | N5—C17—H17 | 118.4 |
| C5—C4—H4A | 108.9 | C18—C17—H17 | 118.4 |
| N1—C4—H4B | 108.9 | C17—C18—C14 | 119.38 (17) |
| C5—C4—H4B | 108.9 | C17—C18—H18 | 120.3 |
| H4A—C4—H4B | 107.7 | C14—C18—H18 | 120.3 |
| N2i—Cd—S1—C1 | −86.27 (7) | C4—N1—C2—C3 | −87.99 (17) |
| N2—Cd—S1—C1 | 93.73 (7) | N1—C2—C3—O1 | 70.19 (17) |
| S1i—Cd—S1—C1 | 95 (100) | C1—N1—C4—C5 | 90.95 (18) |
| S2—Cd—S1—C1 | 1.40 (5) | C2—N1—C4—C5 | −89.78 (16) |
| S2i—Cd—S1—C1 | −178.60 (5) | N1—C4—C5—C6 | 175.96 (13) |
| N2i—Cd—S2—C1 | 88.89 (7) | C11—N2—C7—C8 | 0.3 (3) |
| N2—Cd—S2—C1 | −91.11 (7) | Cd—N2—C7—C8 | 179.02 (14) |
| S1—Cd—S2—C1 | −1.41 (5) | N2—C7—C8—C9 | −0.1 (3) |
| S1i—Cd—S2—C1 | 178.59 (5) | C7—C8—C9—C10 | −0.3 (3) |
| S2i—Cd—S2—C1 | −29 (100) | C7—C8—C9—C12 | −179.20 (17) |
| N2i—Cd—N2—C11 | −146 (100) | C8—C9—C10—C11 | 0.5 (2) |
| S1—Cd—N2—C11 | −10.78 (13) | C12—C9—C10—C11 | 179.47 (15) |
| S1i—Cd—N2—C11 | 169.22 (13) | C7—N2—C11—C10 | −0.1 (3) |
| S2—Cd—N2—C11 | 58.06 (13) | Cd—N2—C11—C10 | −178.83 (13) |
| S2i—Cd—N2—C11 | −121.94 (13) | C9—C10—C11—N2 | −0.3 (3) |
| N2i—Cd—N2—C7 | 35 (100) | N4—N3—C12—C9 | 176.90 (14) |
| S1—Cd—N2—C7 | 170.58 (14) | C10—C9—C12—N3 | 173.70 (15) |
| S1i—Cd—N2—C7 | −9.42 (14) | C8—C9—C12—N3 | −7.4 (3) |
| S2—Cd—N2—C7 | −120.58 (14) | N3—N4—C13—C14 | 179.61 (14) |
| S2i—Cd—N2—C7 | 59.42 (14) | N4—C13—C14—C15 | 169.03 (16) |
| C12—N3—N4—C13 | −177.28 (14) | N4—C13—C14—C18 | −10.7 (3) |
| C2—N1—C1—S2 | −2.1 (2) | C18—C14—C15—C16 | −1.1 (3) |
| C4—N1—C1—S2 | 177.14 (10) | C13—C14—C15—C16 | 179.14 (16) |
| C2—N1—C1—S1 | 177.52 (10) | C17—N5—C16—C15 | 0.6 (3) |
| C4—N1—C1—S1 | −3.2 (2) | C14—C15—C16—N5 | 0.4 (3) |
| Cd—S2—C1—N1 | −178.09 (12) | C16—N5—C17—C18 | −0.8 (3) |
| Cd—S2—C1—S1 | 2.29 (8) | N5—C17—C18—C14 | 0.1 (3) |
| Cd—S1—C1—N1 | 178.07 (12) | C15—C14—C18—C17 | 0.9 (3) |
| Cd—S1—C1—S2 | −2.31 (8) | C13—C14—C18—C17 | −179.34 (16) |
| C1—N1—C2—C3 | 91.28 (18) |
| H··· | ||||
| O1—H1o···N5ii | 0.84 (2) | 1.98 (2) | 2.810 (2) | 176 (2) |
| C10—H10···O1iii | 0.95 | 2.55 | 3.480 (3) | 168 |
| C3—H3a···N4iv | 0.99 | 2.61 | 3.369 (3) | 134 |
| Cd—S1 | 2.6379 (10) |
| Cd—S2 | 2.6626 (10) |
| Cd—N2 | 2.5403 (17) |
| S1—Cd—S2 | 68.83 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.84 (2) | 1.98 (2) | 2.810 (2) | 176 (2) |
| C10—H10⋯O1ii | 0.95 | 2.55 | 3.480 (3) | 168 |
| C3—H3a⋯N4iii | 0.99 | 2.61 | 3.369 (3) | 134 |
Symmetry codes: (i) ; (ii) ; (iii) .