Literature DB >> 21519863

1H, 13C, and 15N NMR assignments of the Pyrococcus abyssi DNA polymerase II intein.

Jiajing Liu1, Zhenming Du, Clayton D Albracht, Roshni O Naidu, Kenneth V Mills, Chunyu Wang.   

Abstract

Protein splicing is a precise post-translational process mediated by inteins. Inteins are intervening proteins that cleave themselves from a precursor protein while joining the flanking sequences. Here we report the (15)N, (13)C, and (1)H chemical shift assignments of the intein from DNA polymerase II of Pyrococcus abyssi (Pab PolII intein), which has been recombinantly overexpressed and isotopically labeled. The NMR assignments of Pab PolII intein are essential for solution structure determination and protein dynamics study.

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Year:  2011        PMID: 21519863      PMCID: PMC3166996          DOI: 10.1007/s12104-011-9307-4

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  10 in total

Review 1.  Protein splicing and related forms of protein autoprocessing.

Authors:  H Paulus
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

2.  Protein splicing of a Pyrococcus abyssi intein with a C-terminal glutamine.

Authors:  Kenneth V Mills; Jennifer S Manning; Alicia M Garcia; Lisa A Wuerdeman
Journal:  J Biol Chem       Date:  2004-03-15       Impact factor: 5.157

Review 3.  Protein splicing in cis and in trans.

Authors:  Lana Saleh; Francine B Perler
Journal:  Chem Rec       Date:  2006       Impact factor: 6.771

4.  NMR structure of a KlbA intein precursor from Methanococcus jannaschii.

Authors:  Margaret A Johnson; Maurice W Southworth; Torsten Herrmann; Lear Brace; Francine B Perler; Kurt Wüthrich
Journal:  Protein Sci       Date:  2007-07       Impact factor: 6.725

5.  Backbone dynamics and global effects of an activating mutation in minimized Mtu RecA inteins.

Authors:  Zhenming Du; Yangzhong Liu; David Ban; Maria M Lopez; Marlene Belfort; Chunyu Wang
Journal:  J Mol Biol       Date:  2010-05-24       Impact factor: 5.469

6.  Protein splicing of inteins with atypical glutamine and aspartate C-terminal residues.

Authors:  Gil Amitai; Bareket Dassa; Shmuel Pietrokovski
Journal:  J Biol Chem       Date:  2003-10-30       Impact factor: 5.157

Review 7.  Inteins, valuable genetic elements in molecular biology and biotechnology.

Authors:  Skander Elleuche; Stefanie Pöggeler
Journal:  Appl Microbiol Biotechnol       Date:  2010-05-07       Impact factor: 4.813

8.  Branched intermediate formation stimulates peptide bond cleavage in protein splicing.

Authors:  Silvia Frutos; Michael Goger; Baldissera Giovani; David Cowburn; Tom W Muir
Journal:  Nat Chem Biol       Date:  2010-05-23       Impact factor: 15.040

9.  Highly conserved histidine plays a dual catalytic role in protein splicing: a pKa shift mechanism.

Authors:  Zhenming Du; Philip T Shemella; Yangzhong Liu; Scott A McCallum; Brian Pereira; Saroj K Nayak; Georges Belfort; Marlene Belfort; Chunyu Wang
Journal:  J Am Chem Soc       Date:  2009-08-19       Impact factor: 15.419

10.  Solution structure of DnaE intein from Nostoc punctiforme: structural basis for the design of a new split intein suitable for site-specific chemical modification.

Authors:  Jesper S Oeemig; A Sesilja Aranko; Janica Djupsjöbacka; Kimmo Heinämäki; Hideo Iwaï
Journal:  FEBS Lett       Date:  2009-04-01       Impact factor: 4.124

  10 in total
  2 in total

1.  Allosteric Influence of Extremophile Hairpin Motif Mutations on the Protein Splicing Activity of a Hyperthermophilic Intein.

Authors:  Kathryn C Chiarolanzio; Jennifer M Pusztay; Angel Chavez; Jing Zhao; Jian Xie; Chunyu Wang; Kenneth V Mills
Journal:  Biochemistry       Date:  2020-06-24       Impact factor: 3.162

2.  Intramolecular disulfide bond between catalytic cysteines in an intein precursor.

Authors:  Wen Chen; Lingyun Li; Zhenming Du; Jiajing Liu; Julie N Reitter; Kenneth V Mills; Robert J Linhardt; Chunyu Wang
Journal:  J Am Chem Soc       Date:  2012-01-27       Impact factor: 15.419

  2 in total

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