Literature DB >> 21519809

Molecular characterization of adenosine 5'-monophosphate deaminase--the key enzyme responsible for the umami taste of nori (Porphyra yezoensis Ueda, Rhodophyta).

Seiko Minami1, Minoru Sato, Yoshihiro Shiraiwa, Koji Iwamoto.   

Abstract

The enzyme adenosine 5'-monophosphate deaminase (AMPD, EC 3.5.4.6) catalyzes the conversion of adenosine 5'-monophosphate to inosine 5'-mononucleotide (IMP). IMP is generally known as the compound responsible for the umami taste of the edible red alga Porphyra yezoensis Ueda that is known in Japan as nori. Therefore, we suspect that AMPD plays a key role in providing a favorable nori taste. In this study, we undertake the molecular characterization of nori-derived AMPD. The nori AMPD protein has a molecular mass of 55 kDa as estimated from both gel filtration and sodium dodecyl sulfate polyacrylamide gel electrophoresis. The calculated molecular mass from the amino acid sequence deduced from cDNA is 57.1 kDa. The isoelectric point is 5.71. The coding region of AMPD consists of 1,566 bp encoding 522 amino acids and possesses a transmembrane domain and two N-glycosylation sites. The sequence identity of nori AMPD in human and yeast AMPDs was found to be less than 50% and 20% in DNA and amino acid sequences, respectively. Proline in the conserved motif of [SA]-[LIVM]-[NGS]-[STA]-D-D-P was found to be converted to glutamate. These results indicate that nori AMPD is a novel type of AMPD.

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Year:  2011        PMID: 21519809     DOI: 10.1007/s10126-011-9377-4

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  30 in total

1.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

2.  Comparative studies on muscle AMP-deaminase--I. Purification, molecular weight, subunit structure and metal content of the enzymes from rat, rabbit, hen, frog and pikeperch.

Authors:  A Stankiewicz; J Spychała; A Składanowski; M Zydowo
Journal:  Comp Biochem Physiol B       Date:  1979

3.  Calcium activates erythrocyte AMP deaminase [isoform E (AMPD3)] through a protein-protein interaction between calmodulin and the N-terminal domain of the AMPD3 polypeptide.

Authors:  Donna K Mahnke; Richard L Sabina
Journal:  Biochemistry       Date:  2005-04-12       Impact factor: 3.162

4.  Enzymes of adenylate metabolism and their role in hibernation of the white-tailed prairie dog, Cynomys leucurus.

Authors:  T E English; K B Storey
Journal:  Arch Biochem Biophys       Date:  2000-04-01       Impact factor: 4.013

5.  Regulation of skeletal muscle AMP deaminase: lysine residues are critical for the pH-dependent positive homotropic cooperativity behaviour of the rabbit enzyme.

Authors:  D Martini; M Ranieri-Raggi; A R Sabbatini; A Raggi
Journal:  Biochim Biophys Acta       Date:  2001-01-12

6.  Cloning of human AMP deaminase isoform E cDNAs. Evidence for a third AMPD gene exhibiting alternatively spliced 5'-exons.

Authors:  D K Mahnke-Zizelman; R L Sabina
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

7.  Membrane association, mechanism of action, and structure of Arabidopsis embryonic factor 1 (FAC1).

Authors:  Byung Woo Han; Craig A Bingman; Donna K Mahnke; Ryan M Bannen; Sebastian Y Bednarek; Richard L Sabina; George N Phillips
Journal:  J Biol Chem       Date:  2006-03-16       Impact factor: 5.157

8.  Glutamate: from discovery as a food flavor to role as a basic taste (umami).

Authors:  Kenzo Kurihara
Journal:  Am J Clin Nutr       Date:  2009-07-29       Impact factor: 7.045

9.  Adenylate deaminase. A multigene family in humans and rats.

Authors:  T Morisaki; R L Sabina; E W Holmes
Journal:  J Biol Chem       Date:  1990-07-15       Impact factor: 5.157

10.  N-terminal sequence and distal histidine residues are responsible for pH-regulated cytoplasmic membrane binding of human AMP deaminase isoform E.

Authors:  Donna K Mahnke-Zizelman; Richard L Sabina
Journal:  J Biol Chem       Date:  2002-09-03       Impact factor: 5.157

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  2 in total

Review 1.  Perspective: A Historical and Scientific Perspective of Sugar and Its Relation with Obesity and Diabetes.

Authors:  Richard J Johnson; Laura G Sánchez-Lozada; Peter Andrews; Miguel A Lanaspa
Journal:  Adv Nutr       Date:  2017-05-15       Impact factor: 8.701

2.  Proteomics and Metabolomics Profiling of Pork Exudate Reveals Meat Spoilage during Storage.

Authors:  Fan Zhao; Zhenqian Wei; Yun Bai; Chunbao Li; Guanghong Zhou; Karsten Kristiansen; Chong Wang
Journal:  Metabolites       Date:  2022-06-21
  2 in total

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