Literature DB >> 21513897

Microsatellite and minisatellite markers based DNA fingerprinting and genetic diversity of blast and ufra resistant genotypes.

M A Latif1, Mohd Rafii Yusop, M Motiur Rahman, M R Bashar Talukdar.   

Abstract

A total of 78 alleles and 29 loci were detected from nine microsatellite and three minisatellite markers, respectively across 26 blast and ufra disease resistant genotypes. For blast resistant genotypes, the Polymorphic Information Content (PIC) values ranged from 0.280 to 0.726 and RM21 was considered as the best marker. PIC values ranged from 0.5953 to 0.8296 for ufra resistant genotypes and RM23 was the best marker for characterization of ufra resistant genotypes. The genetic similarity analysis using UPGMA clustering generated nine clusters with coefficient of 0.66 for blast resistant genotypes while five genetic clusters with similarity coefficient of 0.42 for ufra resistant genotypes. In order to develop resistant varieties of two major diseases of rice, hybridisation should be made using the parents, BR29 and NJ70507, BR36 and NJ70507 for blast, while BR11 and Aokazi, BR3 and Aokazi, Rayda and BR3 and Rayda and BR11 for ufra.
Copyright © 2011 Académie des sciences. Published by Elsevier SAS. All rights reserved.

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Year:  2011        PMID: 21513897     DOI: 10.1016/j.crvi.2011.02.003

Source DB:  PubMed          Journal:  C R Biol        ISSN: 1631-0691            Impact factor:   1.583


  9 in total

1.  Analysis of the genetic diversity of physic nut, Jatropha curcas L. accessions using RAPD markers.

Authors:  M Y Rafii; M Shabanimofrad; M W Puteri Edaroyati; M A Latif
Journal:  Mol Biol Rep       Date:  2012-02-04       Impact factor: 2.316

2.  Genetic diversity of upland rice germplasm in Malaysia based on quantitative traits.

Authors:  M Sohrabi; M Y Rafii; M M Hanafi; A Siti Nor Akmar; M A Latif
Journal:  ScientificWorldJournal       Date:  2012-04-30

3.  Genetic dissection of sympatric populations of brown planthopper, Nilaparvata lugens (Stål), using DALP-PCR molecular markers.

Authors:  M A Latif; M Y Rafii; M S Mazid; M E Ali; F Ahmed; M Y Omar; S G Tan
Journal:  ScientificWorldJournal       Date:  2012-04-19

4.  Genetic diversity and genetic relationships of japonica rice varieties in Northeast Asia based on SSR markers.

Authors:  Jingguo Wang; Tingbo Jiang; Detang Zou; Hongwei Zhao; Qiang Li; Hualong Liu; Changjun Zhou
Journal:  Biotechnol Biotechnol Equip       Date:  2014-06-16       Impact factor: 1.632

5.  Biomolecular characterization of diazotrophs isolated from the tropical soil in Malaysia.

Authors:  Umme Aminun Naher; Radziah Othman; Mohammad Abdul Latif; Qurban Ali Panhwar; Puteri Aminatulhawa Megat Amaddin; Zulkifli H Shamsuddin
Journal:  Int J Mol Sci       Date:  2013-08-30       Impact factor: 5.923

6.  Heritability and genetic advance among chili pepper genotypes for heat tolerance and morphophysiological characteristics.

Authors:  Magaji G Usman; M Y Rafii; M R Ismail; M A Malek; Mohammad Abdul Latif
Journal:  ScientificWorldJournal       Date:  2014-11-16

Review 7.  Understanding the Dynamics of Blast Resistance in Rice-Magnaporthe oryzae Interactions.

Authors:  Basavantraya N Devanna; Priyanka Jain; Amolkumar U Solanke; Alok Das; Shallu Thakur; Pankaj K Singh; Mandeep Kumari; Himanshu Dubey; Rajdeep Jaswal; Deepak Pawar; Ritu Kapoor; Jyoti Singh; Kirti Arora; Banita Kumari Saklani; Chandrappa AnilKumar; Sheshu Madhav Maganti; Humira Sonah; Rupesh Deshmukh; Rajeev Rathour; Tilak Raj Sharma
Journal:  J Fungi (Basel)       Date:  2022-05-30

8.  Morphological characterization and assessment of genetic variability, character association, and divergence in soybean mutants.

Authors:  M A Malek; Mohd Y Rafii; Most Shahida Sharmin Afroz; Ujjal Kumar Nath; M Monjurul Alam Mondal
Journal:  ScientificWorldJournal       Date:  2014-08-12

9.  Variability Assessment of Aromatic and Fine Rice Germplasm in Bangladesh Based on Quantitative Traits.

Authors:  M Z Islam; M Khalequzzaman; M K Bashar; N A Ivy; M M Haque; M A K Mian
Journal:  ScientificWorldJournal       Date:  2016-03-31
  9 in total

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