| Literature DB >> 21494563 |
John Paul Schmidt1, John M Drake.
Abstract
Determining how biological traits are related to the ability of groups of organisms to become economically damaging when established outside of their native ranges is a major goal of population biology, and important in the management of invasive species. Little is known about why some taxonomic groups are more likely to become pests than others among plants. We investigated traits that discriminate vascular plant genera, a level of taxonomic generality at which risk assessment and screening could be more effectively performed, according to the proportion of naturalized species which are pests. We focused on the United States and Canada, and, because our purpose is ultimately regulatory, considered species classified as weeds or noxious. Using contingency tables, we identified 11 genera of vascular plants that are disproportionately represented by invasive species. Results from boosted regression tree analyses show that these categories reflect biological differences. In summary, approximately 25% of variation in genus proportions of weeds or noxious species was explained by biological covariates. Key explanatory traits included genus means for wetland habitat affinity, chromosome number, and seed mass.Entities:
Mesh:
Year: 2011 PMID: 21494563 PMCID: PMC3073987 DOI: 10.1371/journal.pone.0018654
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Results of contingency table analysis.
| genus | level | # intros | # Weed | # State | life-form | traits | family | order |
|
| Noxious, Weed | 6 | 5 | 5 | forb | mosty biennial, or perennial, 2 annual, wind-dispersed | Asteraceae | Asterales |
|
| Noxious, Weed | 30 | 12 | 11 | forb | annual, biennial, perennial | Asteraceae | Asterales |
|
| Weed | 6 | 6 | 6 | vines | parasitic, vine | Cuscutaceae | Solonales |
|
| Noxious | 3 | 3 | 3 | forb | biennial | Dipsacaceae | Dipsacales |
|
| Weed | 3 | 3 | 1 | shrubs, trees | vertebrate dispersed, 1 facultative wetland | Melastomataceae | Myrtales |
|
| Noxious | 3 | 3 | 3 | grass | C4, perennial, wind-dispersed, facultative wetland | Poaceae | Cyperales |
|
| Noxious | 3 | 3 | 3 | forb | biennial, wind-dispersed | Asteraceae | Asterales |
|
| Noxious, Weed | 7 | 6 | 6 | shrubs, trees | N-fixer, 2 facultative wetland | Fabaceae | Fabales |
|
| Noxious, Weed | 6 | 5 | 5 | forb | C4, annual, 1 facultative wetland | Chenopodiaceae | Caryophyllales |
|
| Noxious | 34 | 11 | 3 | forbs, shrubs, trees, vines | mostly perennial, some annuals | Solonaceae | Solonales |
|
| Noxious, Weed | 3 | 3 | 3 | grass | C4, perennial, 2 facultative wetland | Poaceae | Cyperales |
*Genus is listed rather than individual species.
Genera listed are disproportionately high in the number of species listed as weeds, or state- or federal noxious species per number of species introduced.
Importance value (i.v.) of covariates calculated as the number of times each variable was selected for splitting, weighted by the squared improvement to the model as a result of each split, averaged over all trees, and rescaled to sum to 100 for proportion of weeds and noxious species.
| weed | noxious | ||||||||
| trait | i.v. | taxon | i.v. | trend | trait | i.v. | taxon | i.v. | trend |
| facultative wetland assn. | 16.7 | Solanales | 17.8 | + | ln(seed mass) | 15.2 | Solonales | 17.3 | + |
| HCN (s.d.) | 14.4 | Poaceae | 7.8 | + | HCN (s.d.) | 14.2 | Eurosids | 13.4 | - |
| ln(seed mass) | 11.8 | Asteraceae | 7.1 | + | HCN | 13.5 | Superrosids | 10.7 | - |
| vine | 8.0 | Eurosids | 5.8 | - | facultative wetland assn. | 10.3 | Asteraceae | 9.3 | + |
| HCN | 7.0 | Liliales | 4.4 | - | ln(max. height) | 6.3 | Poaceae | 8.5 | + |
| annual | 6.3 | Rosales | 4.3 | - | annual | 5.2 | Euphorbiaceae | 7.8 | + |
| obligate wetland assn. | 5.7 | Solanaceae | 3.7 | - | obligate wetland assn. | 4.7 | Euasterids | 7.4 | + |
| ln(max. height) | 4.1 | Iridaceae | 2.8 | - | biennial | 4.3 | Dipsacales | 6.7 | + |
| max. precipitation | 3.9 | Eudicot | 2.7 | + | vine | 4.1 | Rhamnales | 5.4 | + |
| subshrub | 3.2 | Acanthaceae | 2.7 | - | tree | 3.5 | Sapindales | 5.3 | + |
| perennial | 3.2 | Monocot-Magnolid | 2.6 | - | min. precipitation | 3.4 | Ranunculales | 2.4 | + |
| forb | 2.9 | Poales | 2.6 | + | min. temperature | 3.1 | Polypodiales | 2.2 | - |
| biennial | 2.5 | Commelids | 2.5 | + | perennial | 2.7 | Solanaceae | 2.0 | - |
| min. precipitation | 2.4 | Asparagales | 2.4 | - | min. frostfree days | 2.6 | |||
| tree | 2.3 | Dipsacales | 2.4 | + | subshrub | 2.6 | |||
| min. temperature | 2.2 | Brassicaceae | 2.4 | + | forb | 2.3 | |||
| Rubiaceae | 2.4 | - | shrub | 2.0 | |||||
| Zingiberales | 2.1 | - | |||||||
| Cactaceae | 2.1 | - | |||||||
| Apiaceae | 2.1 | - | |||||||
Covariates with importance values <2% are not included. Trend indicates whether the relationship with taxonomic groups is positive or negative.
Figure 1Marginal plots (improvements of the GBM model predicting weed proportion as a function of a single explanatory variable [) overlaid on a frequency histogram (summarizing over the entire dataset of 760 genera) of each explanatory variable.
Right hand y-axis is the log-odds ratio for GBM models. Graphs are arranged by order of explanatory variable importance. HCN = highest chromosome number mean, and HCN (s.d.) = standard deviation in highest chromosome number by genus.
Figure 2Marginal plots (improvements of the GBM model predicting noxious proportion as a function of a single explanatory variable [) overlaid on a frequency histogram (summarizing over the entire dataset of 760 genera) of each explanatory variable.
Right hand y-axis is the log-odds ratio for final GBM models (using training + validation data sets to train the model). Graphs are arranged by order of explanatory variable importance. HCN = highest chromosome number mean, and HCN (s.d.) = standard deviation in highest chromosome number by genus.
Figure 3Schematic of the invasion process based on Kolar and Lodge (2001), but emphasizing the divergence in traits corresponding to the two classes of plants, weeds and noxious species.