Literature DB >> 21494414

An Analysis of All the Relevant Facts and Arguments Indicates that Enzyme Catalysis Does Not Involve Large Contributions from Nuclear Tunneling.

Shina C L Kamerlin1, Arieh Warshel.   

Abstract

Entities:  

Year:  2010        PMID： 21494414      PMCID： PMC3074379          DOI： 10.1002/poc.1620

Source DB:  PubMed          Journal:  J Phys Org Chem        ISSN： 0894-3230            Impact factor:   2.391


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  50 in total

1.  Atomic description of an enzyme reaction dominated by proton tunneling.

Authors:  Laura Masgrau; Anna Roujeinikova; Linus O Johannissen; Parvinder Hothi; Jaswir Basran; Kara E Ranaghan; Adrian J Mulholland; Michael J Sutcliffe; Nigel S Scrutton; David Leys
Journal:  Science       Date:  2006-04-14       Impact factor: 47.728

2.  Nuclear quantum effects on an enzyme-catalyzed reaction with reaction path potential: proton transfer in triosephosphate isomerase.

Authors:  Mingliang Wang; Zhenyu Lu; Weitao Yang
Journal:  J Chem Phys       Date:  2006-03-28       Impact factor: 3.488

Review 3.  Electrostatic basis for enzyme catalysis.

Authors:  Arieh Warshel; Pankaz K Sharma; Mitsunori Kato; Yun Xiang; Hanbin Liu; Mats H M Olsson
Journal:  Chem Rev       Date:  2006-08       Impact factor: 60.622

4.  Enzyme dynamics and tunneling enhanced by compression in the hydrogen abstraction catalyzed by soybean lipoxygenase-1.

Authors:  Ismael Tejero; Mireia Garcia-Viloca; Angels Gonzalez-Lafont; José M Lluch; Darrin M York
Journal:  J Phys Chem B       Date:  2006-12-07       Impact factor: 2.991

Review 5.  Relating protein motion to catalysis.

Authors:  Sharon Hammes-Schiffer; Stephen J Benkovic
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

6.  Coordinated effects of distal mutations on environmentally coupled tunneling in dihydrofolate reductase.

Authors:  Lin Wang; Nina M Goodey; Stephen J Benkovic; Amnon Kohen
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-10       Impact factor: 11.205

7.  A new paradigm for electrostatic catalysis of radical reactions in vitamin B12 enzymes.

Authors:  Pankaz K Sharma; Zhen T Chu; Mats H M Olsson; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-21       Impact factor: 11.205

8.  Hydride transfer in liver alcohol dehydrogenase: quantum dynamics, kinetic isotope effects, and role of enzyme motion.

Authors:  S R Billeter; S P Webb; P K Agarwal; T Iordanov; S Hammes-Schiffer
Journal:  J Am Chem Soc       Date:  2001-11-14       Impact factor: 15.419

9.  Coupling of protein motions and hydrogen transfer during catalysis by Escherichia coli dihydrofolate reductase.

Authors:  Richard S Swanwick; Giovanni Maglia; Lai-hock Tey; Rudolf K Allemann
Journal:  Biochem J       Date:  2006-02-15       Impact factor: 3.857

10.  Density-functional investigation on the mechanism of H-atom abstraction by lipoxygenase.

Authors:  Nicolai Lehnert; Edward I Solomon
Journal:  J Biol Inorg Chem       Date:  2002-11-14       Impact factor: 3.358
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  11 in total

1.  Probing quantum and dynamic effects in concerted proton-electron transfer reactions of phenol-base compounds.

Authors:  Todd F Markle; Adam L Tenderholt; James M Mayer
Journal:  J Phys Chem B       Date:  2011-12-23       Impact factor: 2.991

2.  Evidence that a 'dynamic knockout' in Escherichia coli dihydrofolate reductase does not affect the chemical step of catalysis.

Authors:  E Joel Loveridge; Enas M Behiry; Jiannan Guo; Rudolf K Allemann
Journal:  Nat Chem       Date:  2012-03-11       Impact factor: 24.427

3.  Gaining insight into the chemistry of lipoxygenases: a computational investigation into the catalytic mechanism of (8R)-lipoxygenase.

Authors:  Eric A C Bushnell; Riam Jamil; James W Gauld
Journal:  J Biol Inorg Chem       Date:  2013-01-30       Impact factor: 3.358

Review 4.  Examining the case for the effect of barrier compression on tunneling, vibrationally enhanced catalysis, catalytic entropy and related issues.

Authors:  Shina Caroline Lynn Kamerlin; Janez Mavri; A Warshel
Journal:  FEBS Lett       Date:  2010-04-29       Impact factor: 4.124

Review 5.  Perspective: Defining and quantifying the role of dynamics in enzyme catalysis.

Authors:  Arieh Warshel; Ram Prasad Bora
Journal:  J Chem Phys       Date:  2016-05-14       Impact factor: 3.488

Review 6.  Computer aided enzyme design and catalytic concepts.

Authors:  Maria P Frushicheva; Matthew J L Mills; Patrick Schopf; Manoj K Singh; Ram B Prasad; Arieh Warshel
Journal:  Curr Opin Chem Biol       Date:  2014-05-08       Impact factor: 8.822

7.  Heavy-enzyme kinetic isotope effects on proton transfer in alanine racemase.

Authors:  Michael D Toney; Joan Nieto Castro; Trevor A Addington
Journal:  J Am Chem Soc       Date:  2013-02-05       Impact factor: 15.419

Review 8.  At the dawn of the 21st century: Is dynamics the missing link for understanding enzyme catalysis?

Authors:  Shina C L Kamerlin; Arieh Warshel
Journal:  Proteins       Date:  2010-05-01

9.  With or without light: comparing the reaction mechanism of dark-operative protochlorophyllide oxidoreductase with the energetic requirements of the light-dependent protochlorophyllide oxidoreductase.

Authors:  Pedro J Silva
Journal:  PeerJ       Date:  2014-09-02       Impact factor: 2.984

Review 10.  Does the pressure dependence of kinetic isotope effects report usefully on dynamics in enzyme H-transfer reactions?

Authors:  Robin Hoeven; Derren J Heyes; Sam Hay; Nigel S Scrutton
Journal:  FEBS J       Date:  2015-01-29       Impact factor: 5.542
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